RNA–Protein interactions for RNA: ENST00000507208.1

MBD4-206, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MBD4, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-206ENST00000507208 MAPKBP1O60336 1514 aa23.5■■□□□ 1.35
MBD4-206ENST00000507208 CFAP43Q8NDM7 1665 aa23.47■■□□□ 1.35
MBD4-206ENST00000507208 SUPT16HQ9Y5B9 1047 aaKnown RBP23.45■■□□□ 1.35
MBD4-206ENST00000507208 MRC2Q9UBG0 1479 aa23.45■■□□□ 1.34
MBD4-206ENST00000507208 URB2Q14146 1524 aaKnown RBP23.44■■□□□ 1.34
MBD4-206ENST00000507208 RANGAP1P46060 587 aaPredicted RBP23.41■■□□□ 1.34
MBD4-206ENST00000507208 RAB3GAP2Q9H2M9 1393 aa23.37■■□□□ 1.33
MBD4-206ENST00000507208 WDR62O43379 1518 aa23.36■■□□□ 1.33
MBD4-206ENST00000507208 LRRC9Q6ZRR7 1453 aa23.35■■□□□ 1.33
MBD4-206ENST00000507208 SETD5Q9C0A6 1442 aa23.33■■□□□ 1.33
MBD4-206ENST00000507208 TOPBP1Q92547 1522 aa23.31■■□□□ 1.32
MBD4-206ENST00000507208 IGF1RP08069 1367 aa23.31■■□□□ 1.32
MBD4-206ENST00000507208 FHAD1B1AJZ9 1412 aa23.29■■□□□ 1.32
MBD4-206ENST00000507208 TIMELESSQ9UNS1 1208 aa23.27■■□□□ 1.32
MBD4-206ENST00000507208 DNMBPQ6XZF7 1577 aa23.26■■□□□ 1.31
MBD4-206ENST00000507208 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.25■■□□□ 1.31
MBD4-206ENST00000507208 PCF11O94913 1555 aaKnown RBP23.24■■□□□ 1.31
MBD4-206ENST00000507208 WDR97A6NE52 1622 aa23.24■■□□□ 1.31
MBD4-206ENST00000507208 EFCAB5A4FU69 1503 aa23.22■■□□□ 1.31
MBD4-206ENST00000507208 AQRO60306 1485 aaKnown RBP eCLIP23.2■■□□□ 1.39e-7■■■□□ 15.4
MBD4-206ENST00000507208 CARMIL1Q5VZK9 1371 aa23.2■■□□□ 1.3
MBD4-206ENST00000507208 PHLDB1Q86UU1 1377 aa23.2■■□□□ 1.3
MBD4-206ENST00000507208 FYCO1Q9BQS8 1478 aa23.19■■□□□ 1.3
MBD4-206ENST00000507208 FGD5Q6ZNL6 1462 aa23.18■■□□□ 1.3
MBD4-206ENST00000507208 TSHZ2Q9NRE2 1034 aa23.17■■□□□ 1.3
MBD4-206ENST00000507208 POLA1P09884 1462 aaPredicted RBP23.15■■□□□ 1.3
MBD4-206ENST00000507208 CTTNBP2Q8WZ74 1663 aa23.12■■□□□ 1.29
MBD4-206ENST00000507208 RAD54L2Q9Y4B4 1467 aa23.12■■□□□ 1.29
MBD4-206ENST00000507208 CUL7Q14999 1698 aa23.11■■□□□ 1.29
MBD4-206ENST00000507208 CASKIN1Q8WXD9 1431 aa23.08■■□□□ 1.29
MBD4-206ENST00000507208 PPP1R15AO75807 674 aaPredicted RBP23.07■■□□□ 1.28
MBD4-206ENST00000507208 CCER2I3L3R5 266 aa23.06■■□□□ 1.28
MBD4-206ENST00000507208 ZNF608Q9ULD9 1512 aaPredicted RBP23.05■■□□□ 1.28
MBD4-206ENST00000507208 TARBP1Q13395 1621 aaKnown RBP23.05■■□□□ 1.28
MBD4-206ENST00000507208 ITGAEP38570 1179 aa23.04■■□□□ 1.28
MBD4-206ENST00000507208 ABCA10Q8WWZ4 1543 aa23.04■■□□□ 1.28
MBD4-206ENST00000507208 IFT140Q96RY7 1462 aa23.01■■□□□ 1.27
MBD4-206ENST00000507208 KCNH8Q96L42 1107 aa23■■□□□ 1.27
MBD4-206ENST00000507208 ANP32EQ9BTT0 268 aa22.97■■□□□ 1.27
MBD4-206ENST00000507208 FGD6Q6ZV73 1430 aa22.96■■□□□ 1.27
MBD4-206ENST00000507208 TDRD9Q8NDG6 1382 aaKnown RBP22.96■■□□□ 1.27
MBD4-206ENST00000507208 SNAPC4Q5SXM2 1469 aa22.95■■□□□ 1.26
MBD4-206ENST00000507208 PTPN23Q9H3S7 1636 aa22.95■■□□□ 1.26
MBD4-206ENST00000507208 HFM1A2PYH4 1435 aa22.94■■□□□ 1.26
MBD4-206ENST00000507208 SIN3AQ96ST3 1273 aa22.93■■□□□ 1.26
MBD4-206ENST00000507208 FMN1Q68DA7 1419 aa22.93■■□□□ 1.26
MBD4-206ENST00000507208 DDX10Q13206 875 aaKnown RBP22.93■■□□□ 1.26
MBD4-206ENST00000507208 FHOD3Q2V2M9 1422 aa22.93■■□□□ 1.26
MBD4-206ENST00000507208 SAMD9Q5K651 1589 aa22.93■■□□□ 1.26
MBD4-206ENST00000507208 UACAQ9BZF9 1416 aa22.92■■□□□ 1.26
MBD4-206ENST00000507208 CCDC18Q5T9S5 1454 aa22.91■■□□□ 1.26
MBD4-206ENST00000507208 FAM50AQ14320 339 aaKnown RBP22.91■■□□□ 1.26
MBD4-206ENST00000507208 EIF4G3O43432 1585 aaKnown RBP22.9■■□□□ 1.26
MBD4-206ENST00000507208 LRRIQ1Q96JM4 1722 aa22.89■■□□□ 1.25
MBD4-206ENST00000507208 KDM5BQ9UGL1 1544 aa22.86■■□□□ 1.25
MBD4-206ENST00000507208 FKBP8Q14318 412 aa22.84■■□□□ 1.25
MBD4-206ENST00000507208 ANP32CO43423 234 aa22.84■■□□□ 1.25
MBD4-206ENST00000507208 SUPT6HQ7KZ85 1726 aaKnown RBP22.84■■□□□ 1.25
MBD4-206ENST00000507208 GCC2Q8IWJ2 1684 aa22.82■■□□□ 1.24
MBD4-206ENST00000507208 NEFLP07196 543 aa22.82■■□□□ 1.24
MBD4-206ENST00000507208 EHBP1L1Q8N3D4 1523 aa22.82■■□□□ 1.24
MBD4-206ENST00000507208 TONSLQ96HA7 1378 aa22.81■■□□□ 1.24
MBD4-206ENST00000507208 HECW1Q76N89 1606 aa22.8■■□□□ 1.24
MBD4-206ENST00000507208 ARHGEF11O15085 1522 aa22.8■■□□□ 1.24
MBD4-206ENST00000507208 GRIN2BQ13224 1484 aa22.79■■□□□ 1.24
MBD4-206ENST00000507208 ABCA5Q8WWZ7 1642 aa22.79■■□□□ 1.24
MBD4-206ENST00000507208 NAIPQ13075 1403 aa22.78■■□□□ 1.24
MBD4-206ENST00000507208 MYOM3Q5VTT5 1437 aa22.78■■□□□ 1.24
MBD4-206ENST00000507208 PTPRKQ15262 1439 aa22.77■■□□□ 1.24
MBD4-206ENST00000507208 GAPVD1Q14C86 1478 aa22.77■■□□□ 1.24
MBD4-206ENST00000507208 AKNAQ7Z591 1439 aa22.76■■□□□ 1.23
MBD4-206ENST00000507208 NCOA2Q15596 1464 aa22.75■■□□□ 1.23
MBD4-206ENST00000507208 UGGT2Q9NYU1 1516 aa22.75■■□□□ 1.23
MBD4-206ENST00000507208 TCOF1Q13428 1488 aaKnown RBP22.72■■□□□ 1.23
MBD4-206ENST00000507208 PBRM1Q86U86 1689 aa22.72■■□□□ 1.23
MBD4-206ENST00000507208 MTUS2Q5JR59 1369 aa22.72■■□□□ 1.23
MBD4-206ENST00000507208 BCANQ96GW7 911 aa22.69■■□□□ 1.22
MBD4-206ENST00000507208 P3H3Q8IVL6 736 aa22.67■■□□□ 1.22
MBD4-206ENST00000507208 RBM19Q9Y4C8 960 aaKnown RBP22.66■■□□□ 1.22
MBD4-206ENST00000507208 POLR1AO95602 1720 aaPredicted RBP22.64■■□□□ 1.21
MBD4-206ENST00000507208 TRIM52Q96A61 297 aa22.62■■□□□ 1.21
MBD4-206ENST00000507208 FBLN2P98095 1184 aa22.61■■□□□ 1.21
MBD4-206ENST00000507208 ERICH6BQ5W0A0 696 aa22.61■■□□□ 1.21
MBD4-206ENST00000507208 DENND4BO75064 1496 aaPredicted RBP22.6■■□□□ 1.21
MBD4-206ENST00000507208 ATP1B4Q9UN42 357 aaPredicted RBP22.59■■□□□ 1.21
MBD4-206ENST00000507208 CHD1O14646 1710 aa22.58■■□□□ 1.21
MBD4-206ENST00000507208 HIRIP3Q9BW71 556 aaPredicted RBP22.58■■□□□ 1.21
MBD4-206ENST00000507208 MAGI3Q5TCQ9 1506 aa22.58■■□□□ 1.21
MBD4-206ENST00000507208 MAGI1Q96QZ7 1491 aaPredicted RBP22.56■■□□□ 1.2
MBD4-206ENST00000507208 CNTLNQ9NXG0 1405 aa22.55■■□□□ 1.2
MBD4-206ENST00000507208 ADAMTS12P58397 1594 aa22.54■■□□□ 1.2
MBD4-206ENST00000507208 MIA2Q96PC5 1412 aa22.53■■□□□ 1.2
MBD4-206ENST00000507208 FANCIQ9NVI1 1328 aa22.53■■□□□ 1.2
MBD4-206ENST00000507208 CHMP7Q8WUX9 453 aaPredicted RBP22.51■■□□□ 1.19
MBD4-206ENST00000507208 SYNJ2O15056 1496 aa22.51■■□□□ 1.19
MBD4-206ENST00000507208 WASHC2AQ641Q2 1341 aa22.5■■□□□ 1.19
MBD4-206ENST00000507208 NCOA1Q15788 1441 aa22.49■■□□□ 1.19
MBD4-206ENST00000507208 KDM6BO15054 1643 aa22.48■■□□□ 1.19
MBD4-206ENST00000507208 HSPA5P11021 654 aaKnown RBP22.44■■□□□ 1.18
MBD4-206ENST00000507208 HNRNPUQ00839 825 aaKnown RBP eCLIP22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms