RNA–Protein interactions for RNA: ENST00000506080.5

PTPN20-216, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN20, Length 1,401 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-216ENST00000506080 WDR97A6NE52 1622 aa16.93■□□□□ 0.3
PTPN20-216ENST00000506080 MAGI1Q96QZ7 1491 aaPredicted RBP16.93■□□□□ 0.3
PTPN20-216ENST00000506080 GRIN2BQ13224 1484 aa16.92■□□□□ 0.3
PTPN20-216ENST00000506080 SYNJ2O15056 1496 aa16.89■□□□□ 0.29
PTPN20-216ENST00000506080 GAPVD1Q14C86 1478 aa16.84■□□□□ 0.29
PTPN20-216ENST00000506080 PBRM1Q86U86 1689 aa16.83■□□□□ 0.28
PTPN20-216ENST00000506080 ABCA10Q8WWZ4 1543 aa16.76■□□□□ 0.27
PTPN20-216ENST00000506080 ABCA5Q8WWZ7 1642 aa16.75■□□□□ 0.27
PTPN20-216ENST00000506080 ERCC6L2Q5T890 1561 aa16.74■□□□□ 0.27
PTPN20-216ENST00000506080 GRIN2AQ12879 1464 aa16.71■□□□□ 0.26
PTPN20-216ENST00000506080 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.7■□□□□ 0.26
PTPN20-216ENST00000506080 C1QBPQ07021 282 aaKnown RBP16.68■□□□□ 0.26
PTPN20-216ENST00000506080 CEP170Q5SW79 1584 aa16.67■□□□□ 0.26
PTPN20-216ENST00000506080 ADAMTS12P58397 1594 aa16.66■□□□□ 0.26
PTPN20-216ENST00000506080 NUP160Q12769 1436 aa16.65■□□□□ 0.26
PTPN20-216ENST00000506080 WRNQ14191 1432 aaPredicted RBP eCLIP16.65■□□□□ 0.26
PTPN20-216ENST00000506080 SUPT5HO00267 1087 aaKnown RBP16.64■□□□□ 0.25
PTPN20-216ENST00000506080 FHAD1B1AJZ9 1412 aa16.6■□□□□ 0.25
PTPN20-216ENST00000506080 SHROOM2Q13796 1616 aa16.59■□□□□ 0.25
PTPN20-216ENST00000506080 TOP2BQ02880 1626 aa16.56■□□□□ 0.24
PTPN20-216ENST00000506080 BIVM-ERCC5R4GMW8 1640 aa16.56■□□□□ 0.24
PTPN20-216ENST00000506080 PRG4Q92954 1404 aaPredicted RBP16.54■□□□□ 0.24
PTPN20-216ENST00000506080 ERICH3Q5RHP9 1530 aa16.53■□□□□ 0.24
PTPN20-216ENST00000506080 KIF13AQ9H1H9 1805 aa16.52■□□□□ 0.24
PTPN20-216ENST00000506080 JPH4Q96JJ6 628 aa16.52■□□□□ 0.23
PTPN20-216ENST00000506080 FAM69CQ0P6D2 419 aa16.46■□□□□ 0.23
PTPN20-216ENST00000506080 NPM1P06748 294 aaKnown RBP eCLIP16.45■□□□□ 0.22
PTPN20-216ENST00000506080 RUSC2Q8N2Y8 1516 aa16.42■□□□□ 0.22
PTPN20-216ENST00000506080 ABCC10Q5T3U5 1492 aa16.42■□□□□ 0.22
PTPN20-216ENST00000506080 U3KPZ7 1027 aaPredicted RBP16.38■□□□□ 0.21
PTPN20-216ENST00000506080 MAPKBP1O60336 1514 aa16.38■□□□□ 0.21
PTPN20-216ENST00000506080 ADCY10Q96PN6 1610 aa16.37■□□□□ 0.21
PTPN20-216ENST00000506080 DIP2BQ9P265 1576 aa16.37■□□□□ 0.21
PTPN20-216ENST00000506080 SLC4A2P04920 1241 aa16.33■□□□□ 0.2
PTPN20-216ENST00000506080 KIAA0586Q9BVV6 1533 aa16.32■□□□□ 0.2
PTPN20-216ENST00000506080 KDM4FA0A1W2PPD8 638 aa16.31■□□□□ 0.2
PTPN20-216ENST00000506080 KDM6BO15054 1643 aa16.31■□□□□ 0.2
PTPN20-216ENST00000506080 TSPOAP1O95153 1857 aa16.3■□□□□ 0.2
PTPN20-216ENST00000506080 TTBK1Q5TCY1 1321 aaPredicted RBP16.3■□□□□ 0.2
PTPN20-216ENST00000506080 IGF1RP08069 1367 aa16.29■□□□□ 0.2
PTPN20-216ENST00000506080 KIF27Q86VH2 1401 aa16.25■□□□□ 0.19
PTPN20-216ENST00000506080 PTPRGP23470 1445 aa16.24■□□□□ 0.19
PTPN20-216ENST00000506080 CUL7Q14999 1698 aa16.24■□□□□ 0.19
PTPN20-216ENST00000506080 CARMIL1Q5VZK9 1371 aa16.2■□□□□ 0.18
PTPN20-216ENST00000506080 TNIKQ9UKE5 1360 aa16.19■□□□□ 0.18
PTPN20-216ENST00000506080 CARMIL2Q6F5E8 1435 aa16.18■□□□□ 0.18
PTPN20-216ENST00000506080 ABCC2Q92887 1545 aa16.17■□□□□ 0.18
PTPN20-216ENST00000506080 ASXL2Q76L83 1435 aa16.16■□□□□ 0.18
PTPN20-216ENST00000506080 PLB1Q6P1J6 1458 aa16.14■□□□□ 0.17
PTPN20-216ENST00000506080 SPINK5Q9NQ38 1064 aaPredicted RBP16.13■□□□□ 0.17
PTPN20-216ENST00000506080 PPRC1Q5VV67 1664 aaKnown RBP16.13■□□□□ 0.17
PTPN20-216ENST00000506080 IQGAP2Q13576 1575 aa16.12■□□□□ 0.17
PTPN20-216ENST00000506080 GLI2P10070 1586 aa16.11■□□□□ 0.17
PTPN20-216ENST00000506080 ILDR1Q86SU0 546 aaPredicted RBP16.11■□□□□ 0.17
PTPN20-216ENST00000506080 UACAQ9BZF9 1416 aa16.1■□□□□ 0.17
PTPN20-216ENST00000506080 UHRF1BP1LA0JNW5 1464 aa16.09■□□□□ 0.17
PTPN20-216ENST00000506080 ADGRL1O94910 1474 aa16.09■□□□□ 0.17
PTPN20-216ENST00000506080 DISP1Q96F81 1524 aa16.08■□□□□ 0.17
PTPN20-216ENST00000506080 COL17A1Q9UMD9 1497 aaPredicted RBP16.07■□□□□ 0.16
PTPN20-216ENST00000506080 EPRSP07814 1512 aaKnown RBP16.06■□□□□ 0.16
PTPN20-216ENST00000506080 CAPN15O75808 1086 aa16.06■□□□□ 0.16
PTPN20-216ENST00000506080 KDM5BQ9UGL1 1544 aa16.03■□□□□ 0.16
PTPN20-216ENST00000506080 MAP3K4Q9Y6R4 1608 aa16.02■□□□□ 0.16
PTPN20-216ENST00000506080 ZCCHC11Q5TAX3 1644 aaKnown RBP16.01■□□□□ 0.15
PTPN20-216ENST00000506080 TEX14Q8IWB6 1497 aa16.01■□□□□ 0.15
PTPN20-216ENST00000506080 UGGT2Q9NYU1 1516 aa16■□□□□ 0.15
PTPN20-216ENST00000506080 RAPGEF2Q9Y4G8 1499 aa15.99■□□□□ 0.15
PTPN20-216ENST00000506080 SLC4A1APQ9BWU0 796 aaKnown RBP15.99■□□□□ 0.15
PTPN20-216ENST00000506080 KIAA0556O60303 1618 aa15.99■□□□□ 0.15
PTPN20-216ENST00000506080 HECW2Q9P2P5 1572 aa15.96■□□□□ 0.14
PTPN20-216ENST00000506080 WDR7Q9Y4E6 1490 aa15.95■□□□□ 0.14
PTPN20-216ENST00000506080 DSG3P32926 999 aa15.94■□□□□ 0.14
PTPN20-216ENST00000506080 KCNH8Q96L42 1107 aa15.93■□□□□ 0.14
PTPN20-216ENST00000506080 CD109Q6YHK3 1445 aa15.9■□□□□ 0.14
PTPN20-216ENST00000506080 MAGI3Q5TCQ9 1506 aa15.87■□□□□ 0.13
PTPN20-216ENST00000506080 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.86■□□□□ 0.13
PTPN20-216ENST00000506080 HNRNPUL2Q1KMD3 747 aaKnown RBP15.86■□□□□ 0.13
PTPN20-216ENST00000506080 CFAP43Q8NDM7 1665 aa15.86■□□□□ 0.13
PTPN20-216ENST00000506080 CTTNBP2Q8WZ74 1663 aa15.86■□□□□ 0.13
PTPN20-216ENST00000506080 ABCA8O94911 1581 aa15.85■□□□□ 0.13
PTPN20-216ENST00000506080 GOLGA3Q08378 1498 aa15.85■□□□□ 0.13
PTPN20-216ENST00000506080 ARID3CA6NKF2 412 aa15.83■□□□□ 0.12
PTPN20-216ENST00000506080 APLP2Q06481 763 aa15.82■□□□□ 0.12
PTPN20-216ENST00000506080 SAMD1Q6SPF0 538 aaPredicted RBP15.81■□□□□ 0.12
PTPN20-216ENST00000506080 KIF21BO75037 1637 aa15.81■□□□□ 0.12
PTPN20-216ENST00000506080 P3H3Q8IVL6 736 aa15.78■□□□□ 0.12
PTPN20-216ENST00000506080 MYCNP04198 464 aaPredicted RBP15.77■□□□□ 0.12
PTPN20-216ENST00000506080 ZNF219Q9P2Y4 722 aaPredicted RBP15.76■□□□□ 0.11
PTPN20-216ENST00000506080 PRXQ9BXM0 1461 aa15.75■□□□□ 0.11
PTPN20-216ENST00000506080 ARAP3Q8WWN8 1544 aa15.75■□□□□ 0.11
PTPN20-216ENST00000506080 ATP10BO94823 1461 aa15.74■□□□□ 0.11
PTPN20-216ENST00000506080 ABCB7O75027 752 aa15.74■□□□□ 0.11
PTPN20-216ENST00000506080 FAM9AQ8IZU1 332 aaPredicted RBP15.73■□□□□ 0.11
PTPN20-216ENST00000506080 RAPGEF3O95398 923 aa15.71■□□□□ 0.11
PTPN20-216ENST00000506080 FOXD4L1Q9NU39 408 aa15.71■□□□□ 0.11
PTPN20-216ENST00000506080 PTPRMP28827 1452 aa15.69■□□□□ 0.1
PTPN20-216ENST00000506080 FBXO41Q8TF61 875 aa15.68■□□□□ 0.1
PTPN20-216ENST00000506080 ABCA9Q8IUA7 1624 aa15.68■□□□□ 0.1
PTPN20-216ENST00000506080 PHLDB1Q86UU1 1377 aa15.67■□□□□ 0.1
PTPN20-216ENST00000506080 ADAMTSL3P82987 1691 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms