RNA–Protein interactions for RNA: ENST00000505453.1

PDE4D-212, Transcript of phosphodiesterase 4D, humanhuman

TSL 5

Gene PDE4D, Length 1,430 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-212ENST00000505453 URB2Q14146 1524 aaKnown RBP16.66■□□□□ 0.26
PDE4D-212ENST00000505453 DNMBPQ6XZF7 1577 aa16.65■□□□□ 0.26
PDE4D-212ENST00000505453 POLA2Q14181 598 aa16.62■□□□□ 0.25
PDE4D-212ENST00000505453 KIF27Q86VH2 1401 aa16.62■□□□□ 0.25
PDE4D-212ENST00000505453 POLA1P09884 1462 aaPredicted RBP16.59■□□□□ 0.25
PDE4D-212ENST00000505453 RAD54L2Q9Y4B4 1467 aa16.59■□□□□ 0.25
PDE4D-212ENST00000505453 CUX2O14529 1486 aa16.58■□□□□ 0.25
PDE4D-212ENST00000505453 UBTFP17480 764 aaKnown RBP16.57■□□□□ 0.24
PDE4D-212ENST00000505453 KIF21AQ7Z4S6 1674 aa16.56■□□□□ 0.24
PDE4D-212ENST00000505453 TNIKQ9UKE5 1360 aa16.55■□□□□ 0.24
PDE4D-212ENST00000505453 GOLGA3Q08378 1498 aa16.55■□□□□ 0.24
PDE4D-212ENST00000505453 MRC2Q9UBG0 1479 aa16.55■□□□□ 0.24
PDE4D-212ENST00000505453 IGF1RP08069 1367 aa16.54■□□□□ 0.24
PDE4D-212ENST00000505453 ABCA10Q8WWZ4 1543 aa16.52■□□□□ 0.23
PDE4D-212ENST00000505453 PRXQ9BXM0 1461 aa16.51■□□□□ 0.23
PDE4D-212ENST00000505453 RAPGEF2Q9Y4G8 1499 aa16.5■□□□□ 0.23
PDE4D-212ENST00000505453 ERCC6Q03468 1493 aa16.5■□□□□ 0.23
PDE4D-212ENST00000505453 KIF21BO75037 1637 aa16.49■□□□□ 0.23
PDE4D-212ENST00000505453 TDRD9Q8NDG6 1382 aaKnown RBP16.45■□□□□ 0.22
PDE4D-212ENST00000505453 CEP162Q5TB80 1403 aa16.43■□□□□ 0.22
PDE4D-212ENST00000505453 CARMIL1Q5VZK9 1371 aa16.43■□□□□ 0.22
PDE4D-212ENST00000505453 WDR62O43379 1518 aa16.42■□□□□ 0.22
PDE4D-212ENST00000505453 ERICH3Q5RHP9 1530 aa16.4■□□□□ 0.22
PDE4D-212ENST00000505453 ZBTB12Q9Y330 459 aaPredicted RBP16.39■□□□□ 0.21
PDE4D-212ENST00000505453 TARBP1Q13395 1621 aaKnown RBP16.37■□□□□ 0.21
PDE4D-212ENST00000505453 GAPVD1Q14C86 1478 aa16.37■□□□□ 0.21
PDE4D-212ENST00000505453 IFT140Q96RY7 1462 aa16.36■□□□□ 0.21
PDE4D-212ENST00000505453 THOC2Q8NI27 1593 aaKnown RBP16.34■□□□□ 0.21
PDE4D-212ENST00000505453 RANGAP1P46060 587 aaPredicted RBP16.34■□□□□ 0.21
PDE4D-212ENST00000505453 WDR97A6NE52 1622 aa16.34■□□□□ 0.21
PDE4D-212ENST00000505453 AQRO60306 1485 aaKnown RBP eCLIP16.33■□□□□ 0.21
PDE4D-212ENST00000505453 CLIP1P30622 1438 aa16.32■□□□□ 0.2
PDE4D-212ENST00000505453 ABCA5Q8WWZ7 1642 aa16.31■□□□□ 0.2
PDE4D-212ENST00000505453 RBM42Q9BTD8 480 aaKnown RBP16.29■□□□□ 0.2
PDE4D-212ENST00000505453 ZNF608Q9ULD9 1512 aaPredicted RBP16.29■□□□□ 0.2
PDE4D-212ENST00000505453 GRIN2BQ13224 1484 aa16.23■□□□□ 0.19
PDE4D-212ENST00000505453 CUL7Q14999 1698 aa16.22■□□□□ 0.19
PDE4D-212ENST00000505453 PPARGC1BQ86YN6 1023 aaKnown RBP16.2■□□□□ 0.18
PDE4D-212ENST00000505453 FHAD1B1AJZ9 1412 aa16.2■□□□□ 0.18
PDE4D-212ENST00000505453 PCGF6Q9BYE7 350 aa16.16■□□□□ 0.18
PDE4D-212ENST00000505453 VPS8Q8N3P4 1428 aa16.16■□□□□ 0.18
PDE4D-212ENST00000505453 TRIM26Q12899 539 aaPredicted RBP16.15■□□□□ 0.18
PDE4D-212ENST00000505453 ARAP1Q96P48 1450 aa16.15■□□□□ 0.18
PDE4D-212ENST00000505453 ARHGAP35Q9NRY4 1499 aa16.15■□□□□ 0.18
PDE4D-212ENST00000505453 SNAPC4Q5SXM2 1469 aa16.13■□□□□ 0.17
PDE4D-212ENST00000505453 EIF4G3O43432 1585 aaKnown RBP16.12■□□□□ 0.17
PDE4D-212ENST00000505453 FBLN2P98095 1184 aa16.12■□□□□ 0.17
PDE4D-212ENST00000505453 ADAMTS12P58397 1594 aa16.12■□□□□ 0.17
PDE4D-212ENST00000505453 PBRM1Q86U86 1689 aa16.11■□□□□ 0.17
PDE4D-212ENST00000505453 P3H3Q8IVL6 736 aa16.1■□□□□ 0.17
PDE4D-212ENST00000505453 OSCARQ8IYS5 282 aa16.08■□□□□ 0.16
PDE4D-212ENST00000505453 CHMP7Q8WUX9 453 aaPredicted RBP16.07■□□□□ 0.16
PDE4D-212ENST00000505453 MAGI1Q96QZ7 1491 aaPredicted RBP16.06■□□□□ 0.16
PDE4D-212ENST00000505453 DNAJC5Q9H3Z4 198 aa16.06■□□□□ 0.16
PDE4D-212ENST00000505453 TTBK1Q5TCY1 1321 aaPredicted RBP16.05■□□□□ 0.16
PDE4D-212ENST00000505453 MKRN4PQ13434 485 aaPredicted RBP16.03■□□□□ 0.16
PDE4D-212ENST00000505453 SYNJ2O15056 1496 aa16.03■□□□□ 0.16
PDE4D-212ENST00000505453 GRIN2AQ12879 1464 aa16.03■□□□□ 0.16
PDE4D-212ENST00000505453 FHOD3Q2V2M9 1422 aa16■□□□□ 0.15
PDE4D-212ENST00000505453 EFCAB5A4FU69 1503 aa15.98■□□□□ 0.15
PDE4D-212ENST00000505453 CTTNBP2Q8WZ74 1663 aa15.97■□□□□ 0.15
PDE4D-212ENST00000505453 KIAA0586Q9BVV6 1533 aa15.97■□□□□ 0.15
PDE4D-212ENST00000505453 KANK4Q5T7N3 995 aaPredicted RBP15.95■□□□□ 0.14
PDE4D-212ENST00000505453 AKT1S1Q96B36 256 aa15.95■□□□□ 0.14
PDE4D-212ENST00000505453 IQGAP2Q13576 1575 aa15.93■□□□□ 0.14
PDE4D-212ENST00000505453 NUP160Q12769 1436 aa15.92■□□□□ 0.14
PDE4D-212ENST00000505453 ATP1B4Q9UN42 357 aaPredicted RBP15.92■□□□□ 0.14
PDE4D-212ENST00000505453 SAMD9Q5K651 1589 aa15.91■□□□□ 0.14
PDE4D-212ENST00000505453 CEP170Q5SW79 1584 aa15.9■□□□□ 0.14
PDE4D-212ENST00000505453 UGGT2Q9NYU1 1516 aa15.9■□□□□ 0.14
PDE4D-212ENST00000505453 FMN1Q68DA7 1419 aa15.89■□□□□ 0.13
PDE4D-212ENST00000505453 CASKIN1Q8WXD9 1431 aa15.88■□□□□ 0.13
PDE4D-212ENST00000505453 JPH4Q96JJ6 628 aa15.88■□□□□ 0.13
PDE4D-212ENST00000505453 SPDYE2BA6NHP3 402 aa15.86■□□□□ 0.13
PDE4D-212ENST00000505453 SPDYE6P0CI01 402 aa15.86■□□□□ 0.13
PDE4D-212ENST00000505453 SPDYE2Q495Y8 402 aa15.86■□□□□ 0.13
PDE4D-212ENST00000505453 DISP1Q96F81 1524 aa15.85■□□□□ 0.13
PDE4D-212ENST00000505453 MAP3K1Q13233 1512 aa15.83■□□□□ 0.12
PDE4D-212ENST00000505453 PCF11O94913 1555 aaKnown RBP15.83■□□□□ 0.12
PDE4D-212ENST00000505453 FYCO1Q9BQS8 1478 aa15.82■□□□□ 0.12
PDE4D-212ENST00000505453 TIAM1Q13009 1591 aa15.8■□□□□ 0.12
PDE4D-212ENST00000505453 POTEHQ6S545 545 aa15.78■□□□□ 0.12
PDE4D-212ENST00000505453 REM2Q8IYK8 340 aaPredicted RBP15.78■□□□□ 0.12
PDE4D-212ENST00000505453 LRRC9Q6ZRR7 1453 aa15.78■□□□□ 0.12
PDE4D-212ENST00000505453 KIAA0556O60303 1618 aa15.77■□□□□ 0.12
PDE4D-212ENST00000505453 CARMIL2Q6F5E8 1435 aa15.77■□□□□ 0.12
PDE4D-212ENST00000505453 CHRDL2Q6WN34 429 aa15.76■□□□□ 0.11
PDE4D-212ENST00000505453 PRG4Q92954 1404 aaPredicted RBP15.74■□□□□ 0.11
PDE4D-212ENST00000505453 ZNF692Q9BU19 519 aaPredicted RBP15.73■□□□□ 0.11
PDE4D-212ENST00000505453 CHD1O14646 1710 aa15.71■□□□□ 0.11
PDE4D-212ENST00000505453 ARID3CA6NKF2 412 aa15.71■□□□□ 0.11
PDE4D-212ENST00000505453 HRCP23327 699 aa15.68■□□□□ 0.1
PDE4D-212ENST00000505453 MTUS2Q5JR59 1369 aa15.68■□□□□ 0.1
PDE4D-212ENST00000505453 PHLDB1Q86UU1 1377 aa15.68■□□□□ 0.1
PDE4D-212ENST00000505453 CFAP43Q8NDM7 1665 aa15.68■□□□□ 0.1
PDE4D-212ENST00000505453 RRBP1Q9P2E9 1410 aaKnown RBP15.67■□□□□ 0.1
PDE4D-212ENST00000505453 EPRSP07814 1512 aaKnown RBP15.67■□□□□ 0.1
PDE4D-212ENST00000505453 CCDC18Q5T9S5 1454 aa15.67■□□□□ 0.1
PDE4D-212ENST00000505453 PLB1Q6P1J6 1458 aa15.66■□□□□ 0.1
PDE4D-212ENST00000505453 PTPRGP23470 1445 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms