RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 KIF21BO75037 1637 aa8.34□□□□□ -1.07
LMNB1-208ENST00000504788 CARMIL1Q5VZK9 1371 aa8.34□□□□□ -1.07
LMNB1-208ENST00000504788 CLASP1Q7Z460 1538 aa8.34□□□□□ -1.08
LMNB1-208ENST00000504788 RAPGEF2Q9Y4G8 1499 aa8.32□□□□□ -1.08
LMNB1-208ENST00000504788 CSRNP3Q8WYN3 585 aa8.31□□□□□ -1.08
LMNB1-208ENST00000504788 DMRT2Q9Y5R5 561 aa8.31□□□□□ -1.08
LMNB1-208ENST00000504788 SHROOM2Q13796 1616 aa8.3□□□□□ -1.08
LMNB1-208ENST00000504788 CTTNBP2Q8WZ74 1663 aa8.29□□□□□ -1.08
LMNB1-208ENST00000504788 CHMP7Q8WUX9 453 aaPredicted RBP8.27□□□□□ -1.09
LMNB1-208ENST00000504788 KIAA0586Q9BVV6 1533 aa8.27□□□□□ -1.09
LMNB1-208ENST00000504788 FAM9AQ8IZU1 332 aaPredicted RBP8.26□□□□□ -1.09
LMNB1-208ENST00000504788 OSCARQ8IYS5 282 aa8.25□□□□□ -1.09
LMNB1-208ENST00000504788 IQGAP2Q13576 1575 aa8.24□□□□□ -1.09
LMNB1-208ENST00000504788 ERCC6L2Q5T890 1561 aa8.24□□□□□ -1.09
LMNB1-208ENST00000504788 FBLN2P98095 1184 aa8.24□□□□□ -1.09
LMNB1-208ENST00000504788 GOLGA3Q08378 1498 aa8.23□□□□□ -1.09
LMNB1-208ENST00000504788 UGGT2Q9NYU1 1516 aa8.23□□□□□ -1.09
LMNB1-208ENST00000504788 DISP1Q96F81 1524 aa8.22□□□□□ -1.09
LMNB1-208ENST00000504788 SCAF1Q9H7N4 1312 aaKnown RBP8.22□□□□□ -1.09
LMNB1-208ENST00000504788 SAMD9Q5K651 1589 aa8.21□□□□□ -1.09
LMNB1-208ENST00000504788 ARHGEF11O15085 1522 aa8.21□□□□□ -1.1
LMNB1-208ENST00000504788 DNAJC5Q9H3Z4 198 aa8.2□□□□□ -1.1
LMNB1-208ENST00000504788 RIMBP3CA6NJZ7 1639 aa8.2□□□□□ -1.1
LMNB1-208ENST00000504788 RIMBP3BA6NNM3 1639 aa8.2□□□□□ -1.1
LMNB1-208ENST00000504788 RIMBP3Q9UFD9 1639 aa8.2□□□□□ -1.1
LMNB1-208ENST00000504788 KIAA0556O60303 1618 aa8.18□□□□□ -1.1
LMNB1-208ENST00000504788 JPH4Q96JJ6 628 aa8.17□□□□□ -1.1
LMNB1-208ENST00000504788 TNIKQ9UKE5 1360 aa8.17□□□□□ -1.1
LMNB1-208ENST00000504788 MAPK8IP2Q13387 824 aaPredicted RBP8.17□□□□□ -1.1
LMNB1-208ENST00000504788 PRG4Q92954 1404 aaPredicted RBP8.16□□□□□ -1.1
LMNB1-208ENST00000504788 LOC105371045A0A1W2PR82 267 aa8.16□□□□□ -1.1
LMNB1-208ENST00000504788 ARAP1Q96P48 1450 aa8.16□□□□□ -1.1
LMNB1-208ENST00000504788 ARHGAP35Q9NRY4 1499 aa8.15□□□□□ -1.1
LMNB1-208ENST00000504788 EFCAB5A4FU69 1503 aa8.14□□□□□ -1.11
LMNB1-208ENST00000504788 EHMT2Q96KQ7 1210 aa8.1□□□□□ -1.11
LMNB1-208ENST00000504788 CEP162Q5TB80 1403 aa8.1□□□□□ -1.11
LMNB1-208ENST00000504788 ABCA8O94911 1581 aa8.1□□□□□ -1.11
LMNB1-208ENST00000504788 UBTFP17480 764 aaKnown RBP8.1□□□□□ -1.11
LMNB1-208ENST00000504788 LRRIQ1Q96JM4 1722 aa8.1□□□□□ -1.11
LMNB1-208ENST00000504788 ADCY10Q96PN6 1610 aa8.1□□□□□ -1.11
LMNB1-208ENST00000504788 FHOD3Q2V2M9 1422 aa8.09□□□□□ -1.11
LMNB1-208ENST00000504788 CARMIL2Q6F5E8 1435 aa8.09□□□□□ -1.11
LMNB1-208ENST00000504788 CLIP1P30622 1438 aa8.08□□□□□ -1.12
LMNB1-208ENST00000504788 PLB1Q6P1J6 1458 aa8.07□□□□□ -1.12
LMNB1-208ENST00000504788 UHRF1BP1LA0JNW5 1464 aa8.07□□□□□ -1.12
LMNB1-208ENST00000504788 PTPRGP23470 1445 aa8.06□□□□□ -1.12
LMNB1-208ENST00000504788 ABCC2Q92887 1545 aa8.06□□□□□ -1.12
LMNB1-208ENST00000504788 RAPGEF6Q8TEU7 1601 aa8.05□□□□□ -1.12
LMNB1-208ENST00000504788 KDM5BQ9UGL1 1544 aa8.05□□□□□ -1.12
LMNB1-208ENST00000504788 NUP153P49790 1475 aaKnown RBP8.04□□□□□ -1.12
LMNB1-208ENST00000504788 UACAQ9BZF9 1416 aa8.04□□□□□ -1.12
LMNB1-208ENST00000504788 PCF11O94913 1555 aaKnown RBP8.04□□□□□ -1.12
LMNB1-208ENST00000504788 P3H3Q8IVL6 736 aa8.03□□□□□ -1.12
LMNB1-208ENST00000504788 CYB5RLQ6IPT4 315 aa8.03□□□□□ -1.12
LMNB1-208ENST00000504788 FMN1Q68DA7 1419 aa8.02□□□□□ -1.13
LMNB1-208ENST00000504788 ZCCHC11Q5TAX3 1644 aaKnown RBP8.02□□□□□ -1.13
LMNB1-208ENST00000504788 MAPKBP1O60336 1514 aa8.01□□□□□ -1.13
LMNB1-208ENST00000504788 ATP10BO94823 1461 aa8.01□□□□□ -1.13
LMNB1-208ENST00000504788 CASKIN1Q8WXD9 1431 aa8.01□□□□□ -1.13
LMNB1-208ENST00000504788 RANGAP1P46060 587 aaPredicted RBP8.01□□□□□ -1.13
LMNB1-208ENST00000504788 VPS8Q8N3P4 1428 aa8□□□□□ -1.13
LMNB1-208ENST00000504788 RNF39Q9H2S5 420 aa8□□□□□ -1.13
LMNB1-208ENST00000504788 FYCO1Q9BQS8 1478 aa8□□□□□ -1.13
LMNB1-208ENST00000504788 DCAF8L1A6NGE4 600 aa7.99□□□□□ -1.13
LMNB1-208ENST00000504788 HECW1Q76N89 1606 aa7.99□□□□□ -1.13
LMNB1-208ENST00000504788 EPRSP07814 1512 aaKnown RBP7.99□□□□□ -1.13
LMNB1-208ENST00000504788 MAGI3Q5TCQ9 1506 aa7.98□□□□□ -1.13
LMNB1-208ENST00000504788 CDK13Q14004 1512 aaKnown RBP7.98□□□□□ -1.13
LMNB1-208ENST00000504788 KIF13AQ9H1H9 1805 aa7.98□□□□□ -1.13
LMNB1-208ENST00000504788 CFAP43Q8NDM7 1665 aa7.97□□□□□ -1.13
LMNB1-208ENST00000504788 MAP3K1Q13233 1512 aa7.95□□□□□ -1.14
LMNB1-208ENST00000504788 TTBK1Q5TCY1 1321 aaPredicted RBP7.95□□□□□ -1.14
LMNB1-208ENST00000504788 TIAM1Q13009 1591 aa7.95□□□□□ -1.14
LMNB1-208ENST00000504788 DIP2BQ9P265 1576 aa7.95□□□□□ -1.14
LMNB1-208ENST00000504788 ASXL2Q76L83 1435 aa7.94□□□□□ -1.14
LMNB1-208ENST00000504788 CCDC18Q5T9S5 1454 aa7.94□□□□□ -1.14
LMNB1-208ENST00000504788 C1QBPQ07021 282 aaKnown RBP7.93□□□□□ -1.14
LMNB1-208ENST00000504788 WDR7Q9Y4E6 1490 aa7.93□□□□□ -1.14
LMNB1-208ENST00000504788 GLI2P10070 1586 aa7.93□□□□□ -1.14
LMNB1-208ENST00000504788 PPRC1Q5VV67 1664 aaKnown RBP7.92□□□□□ -1.14
LMNB1-208ENST00000504788 ABCC10Q5T3U5 1492 aa7.92□□□□□ -1.14
LMNB1-208ENST00000504788 KIF14Q15058 1648 aa7.92□□□□□ -1.14
LMNB1-208ENST00000504788 ABCA9Q8IUA7 1624 aa7.92□□□□□ -1.14
LMNB1-208ENST00000504788 MAP3K4Q9Y6R4 1608 aa7.92□□□□□ -1.14
LMNB1-208ENST00000504788 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.9□□□□□ -1.141e-6■□□□□ 10.8
LMNB1-208ENST00000504788 TTC37Q6PGP7 1564 aa7.9□□□□□ -1.14
LMNB1-208ENST00000504788 TROQ12816 1431 aaPredicted RBP7.89□□□□□ -1.15
LMNB1-208ENST00000504788 LRRC9Q6ZRR7 1453 aa7.89□□□□□ -1.15
LMNB1-208ENST00000504788 ARID3CA6NKF2 412 aa7.89□□□□□ -1.15
LMNB1-208ENST00000504788 KANK4Q5T7N3 995 aaPredicted RBP7.88□□□□□ -1.15
LMNB1-208ENST00000504788 CDC42BPAQ5VT25 1732 aa7.88□□□□□ -1.15
LMNB1-208ENST00000504788 EHBP1L1Q8N3D4 1523 aa7.88□□□□□ -1.15
LMNB1-208ENST00000504788 CDC42BPBQ9Y5S2 1711 aa7.87□□□□□ -1.15
LMNB1-208ENST00000504788 ARAP3Q8WWN8 1544 aa7.85□□□□□ -1.15
LMNB1-208ENST00000504788 PREX2Q70Z35 1606 aa7.85□□□□□ -1.15
LMNB1-208ENST00000504788 SUPT6HQ7KZ85 1726 aaKnown RBP7.85□□□□□ -1.15
LMNB1-208ENST00000504788 NPM1P06748 294 aaKnown RBP eCLIP7.85□□□□□ -1.15
LMNB1-208ENST00000504788 MYO5CQ9NQX4 1742 aa7.84□□□□□ -1.15
LMNB1-208ENST00000504788 NCOA2Q15596 1464 aa7.84□□□□□ -1.15
LMNB1-208ENST00000504788 GPATCH8Q9UKJ3 1502 aaKnown RBP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms