RNA–Protein interactions for RNA: ENST00000504230.2

LINC00958-201, long intergenic non-protein coding RNA 958, humanhuman

TSL 2 BASIC

Gene LINC00958, Length 1,558 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00958-201ENST00000504230 KIF27Q86VH2 1401 aa18.18■□□□□ 0.5
LINC00958-201ENST00000504230 DSG3P32926 999 aa18.17■□□□□ 0.5
LINC00958-201ENST00000504230 AQRO60306 1485 aaKnown RBP eCLIP18.14■□□□□ 0.5
LINC00958-201ENST00000504230 SAMD1Q6SPF0 538 aaPredicted RBP18.14■□□□□ 0.49
LINC00958-201ENST00000504230 GAPVD1Q14C86 1478 aa18.14■□□□□ 0.49
LINC00958-201ENST00000504230 EIF4G3O43432 1585 aaKnown RBP18.13■□□□□ 0.49
LINC00958-201ENST00000504230 ABCA5Q8WWZ7 1642 aa18.13■□□□□ 0.49
LINC00958-201ENST00000504230 EEA1Q15075 1411 aa18.1■□□□□ 0.49
LINC00958-201ENST00000504230 GRIN2BQ13224 1484 aa18.08■□□□□ 0.49
LINC00958-201ENST00000504230 RUSC2Q8N2Y8 1516 aa18.08■□□□□ 0.48
LINC00958-201ENST00000504230 MYCNP04198 464 aaPredicted RBP18.08■□□□□ 0.48
LINC00958-201ENST00000504230 ZNF219Q9P2Y4 722 aaPredicted RBP18.06■□□□□ 0.48
LINC00958-201ENST00000504230 TRHP20396 242 aaPredicted RBP18.05■□□□□ 0.48
LINC00958-201ENST00000504230 ERICH3Q5RHP9 1530 aa18.05■□□□□ 0.48
LINC00958-201ENST00000504230 FAM9AQ8IZU1 332 aaPredicted RBP18.04■□□□□ 0.48
LINC00958-201ENST00000504230 PBRM1Q86U86 1689 aa18.04■□□□□ 0.48
LINC00958-201ENST00000504230 IGF1RP08069 1367 aa18.02■□□□□ 0.48
LINC00958-201ENST00000504230 CSRNP3Q8WYN3 585 aa18.01■□□□□ 0.47
LINC00958-201ENST00000504230 SNAPC4Q5SXM2 1469 aa17.99■□□□□ 0.47
LINC00958-201ENST00000504230 MAGI1Q96QZ7 1491 aaPredicted RBP17.99■□□□□ 0.47
LINC00958-201ENST00000504230 FOXD4L1Q9NU39 408 aa17.98■□□□□ 0.47
LINC00958-201ENST00000504230 CUL7Q14999 1698 aa17.96■□□□□ 0.47
LINC00958-201ENST00000504230 FHAD1B1AJZ9 1412 aa17.95■□□□□ 0.46
LINC00958-201ENST00000504230 CARMIL1Q5VZK9 1371 aa17.95■□□□□ 0.46
LINC00958-201ENST00000504230 ADAMTS12P58397 1594 aa17.93■□□□□ 0.46
LINC00958-201ENST00000504230 SYNJ2O15056 1496 aa17.92■□□□□ 0.46
LINC00958-201ENST00000504230 CHMP7Q8WUX9 453 aaPredicted RBP17.91■□□□□ 0.46
LINC00958-201ENST00000504230 FBLN2P98095 1184 aa17.9■□□□□ 0.46
LINC00958-201ENST00000504230 PRXQ9BXM0 1461 aa17.89■□□□□ 0.45
LINC00958-201ENST00000504230 RAPGEF2Q9Y4G8 1499 aa17.89■□□□□ 0.45
LINC00958-201ENST00000504230 ABCB7O75027 752 aa17.87■□□□□ 0.45
LINC00958-201ENST00000504230 GRIN2AQ12879 1464 aa17.84■□□□□ 0.45
LINC00958-201ENST00000504230 KIF21BO75037 1637 aa17.84■□□□□ 0.45
LINC00958-201ENST00000504230 CHD1O14646 1710 aa17.82■□□□□ 0.44
LINC00958-201ENST00000504230 GOLGA3Q08378 1498 aa17.8■□□□□ 0.44
LINC00958-201ENST00000504230 EHMT2Q96KQ7 1210 aa17.77■□□□□ 0.44
LINC00958-201ENST00000504230 UBTFP17480 764 aaKnown RBP17.74■□□□□ 0.43
LINC00958-201ENST00000504230 OSCARQ8IYS5 282 aa17.74■□□□□ 0.43
LINC00958-201ENST00000504230 NUP160Q12769 1436 aa17.74■□□□□ 0.43
LINC00958-201ENST00000504230 ZBTB22O15209 634 aa17.74■□□□□ 0.43
LINC00958-201ENST00000504230 CEP170Q5SW79 1584 aa17.71■□□□□ 0.43
LINC00958-201ENST00000504230 KIAA0586Q9BVV6 1533 aa17.69■□□□□ 0.42
LINC00958-201ENST00000504230 LOC105371045A0A1W2PR82 267 aa17.68■□□□□ 0.42
LINC00958-201ENST00000504230 CTTNBP2Q8WZ74 1663 aa17.66■□□□□ 0.42
LINC00958-201ENST00000504230 TNIKQ9UKE5 1360 aa17.64■□□□□ 0.41
LINC00958-201ENST00000504230 IQGAP2Q13576 1575 aa17.63■□□□□ 0.41
LINC00958-201ENST00000504230 CLASP1Q7Z460 1538 aa17.63■□□□□ 0.41
LINC00958-201ENST00000504230 POLA2Q14181 598 aa17.61■□□□□ 0.41
LINC00958-201ENST00000504230 ATF5Q9Y2D1 282 aaPredicted RBP17.6■□□□□ 0.41
LINC00958-201ENST00000504230 JPH4Q96JJ6 628 aa17.59■□□□□ 0.41
LINC00958-201ENST00000504230 RANGAP1P46060 587 aaPredicted RBP17.55■□□□□ 0.4
LINC00958-201ENST00000504230 UGGT2Q9NYU1 1516 aa17.54■□□□□ 0.4
LINC00958-201ENST00000504230 SHROOM2Q13796 1616 aa17.54■□□□□ 0.4
LINC00958-201ENST00000504230 CARMIL2Q6F5E8 1435 aa17.51■□□□□ 0.39
LINC00958-201ENST00000504230 PRG4Q92954 1404 aaPredicted RBP17.51■□□□□ 0.39
LINC00958-201ENST00000504230 CEP162Q5TB80 1403 aa17.49■□□□□ 0.39
LINC00958-201ENST00000504230 EFCAB5A4FU69 1503 aa17.49■□□□□ 0.39
LINC00958-201ENST00000504230 CLIP1P30622 1438 aa17.48■□□□□ 0.39
LINC00958-201ENST00000504230 DISP1Q96F81 1524 aa17.47■□□□□ 0.39
LINC00958-201ENST00000504230 SAMD9Q5K651 1589 aa17.46■□□□□ 0.39
LINC00958-201ENST00000504230 KIAA0556O60303 1618 aa17.45■□□□□ 0.38
LINC00958-201ENST00000504230 ATXN8OSP0DMR3 200 aa17.45■□□□□ 0.38
LINC00958-201ENST00000504230 P3H3Q8IVL6 736 aa17.44■□□□□ 0.38
LINC00958-201ENST00000504230 ARHGAP35Q9NRY4 1499 aa17.43■□□□□ 0.38
LINC00958-201ENST00000504230 ARHGEF11O15085 1522 aa17.42■□□□□ 0.38
LINC00958-201ENST00000504230 ERCC6L2Q5T890 1561 aa17.41■□□□□ 0.38
LINC00958-201ENST00000504230 FHOD3Q2V2M9 1422 aa17.39■□□□□ 0.37
LINC00958-201ENST00000504230 DNAJC5Q9H3Z4 198 aa17.38■□□□□ 0.37
LINC00958-201ENST00000504230 PTPRGP23470 1445 aa17.37■□□□□ 0.37
LINC00958-201ENST00000504230 RIMBP3CA6NJZ7 1639 aa17.37■□□□□ 0.37
LINC00958-201ENST00000504230 RIMBP3BA6NNM3 1639 aa17.37■□□□□ 0.37
LINC00958-201ENST00000504230 RIMBP3Q9UFD9 1639 aa17.37■□□□□ 0.37
LINC00958-201ENST00000504230 RBM42Q9BTD8 480 aaKnown RBP17.36■□□□□ 0.37
LINC00958-201ENST00000504230 TTBK1Q5TCY1 1321 aaPredicted RBP17.36■□□□□ 0.37
LINC00958-201ENST00000504230 ARAP1Q96P48 1450 aa17.35■□□□□ 0.37
LINC00958-201ENST00000504230 FMN1Q68DA7 1419 aa17.34■□□□□ 0.37
LINC00958-201ENST00000504230 ZBTB12Q9Y330 459 aaPredicted RBP17.32■□□□□ 0.36
LINC00958-201ENST00000504230 CYB5RLQ6IPT4 315 aa17.27■□□□□ 0.35
LINC00958-201ENST00000504230 VPS8Q8N3P4 1428 aa17.26■□□□□ 0.35
LINC00958-201ENST00000504230 UACAQ9BZF9 1416 aa17.26■□□□□ 0.35
LINC00958-201ENST00000504230 PLB1Q6P1J6 1458 aa17.24■□□□□ 0.35
LINC00958-201ENST00000504230 ABCA8O94911 1581 aa17.23■□□□□ 0.35
LINC00958-201ENST00000504230 RAPGEF6Q8TEU7 1601 aa17.23■□□□□ 0.35
LINC00958-201ENST00000504230 CASKIN1Q8WXD9 1431 aa17.22■□□□□ 0.35
LINC00958-201ENST00000504230 ATP1B4Q9UN42 357 aaPredicted RBP17.22■□□□□ 0.35
LINC00958-201ENST00000504230 UHRF1BP1LA0JNW5 1464 aa17.21■□□□□ 0.35
LINC00958-201ENST00000504230 ABCC2Q92887 1545 aa17.2■□□□□ 0.34
LINC00958-201ENST00000504230 FYCO1Q9BQS8 1478 aa17.2■□□□□ 0.34
LINC00958-201ENST00000504230 PCF11O94913 1555 aaKnown RBP17.2■□□□□ 0.34
LINC00958-201ENST00000504230 HECW1Q76N89 1606 aa17.19■□□□□ 0.34
LINC00958-201ENST00000504230 ADCY10Q96PN6 1610 aa17.16■□□□□ 0.34
LINC00958-201ENST00000504230 NPM1P06748 294 aaKnown RBP eCLIP17.16■□□□□ 0.34
LINC00958-201ENST00000504230 NUP153P49790 1475 aaKnown RBP17.16■□□□□ 0.34
LINC00958-201ENST00000504230 CCDC18Q5T9S5 1454 aa17.13■□□□□ 0.33
LINC00958-201ENST00000504230 KDM5BQ9UGL1 1544 aa17.12■□□□□ 0.33
LINC00958-201ENST00000504230 ARID3CA6NKF2 412 aa17.12■□□□□ 0.33
LINC00958-201ENST00000504230 EPRSP07814 1512 aaKnown RBP17.12■□□□□ 0.33
LINC00958-201ENST00000504230 POTEHQ6S545 545 aa17.11■□□□□ 0.33
LINC00958-201ENST00000504230 ATP10BO94823 1461 aa17.1■□□□□ 0.33
LINC00958-201ENST00000504230 CDK11AQ9UQ88 783 aaPredicted RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms