RNA–Protein interactions for RNA: ENST00000504012.1

LINC01340-201, Transcript of long intergenic non-protein coding RNA 1340, humanhuman

TSL 3 BASIC

Gene LINC01340, Length 724 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01340-201ENST00000504012 CCER2I3L3R5 266 aa8.29□□□□□ -1.08
LINC01340-201ENST00000504012 WASHC2CQ9Y4E1 1318 aa8.29□□□□□ -1.08
LINC01340-201ENST00000504012 C1QBPQ07021 282 aaKnown RBP8.27□□□□□ -1.09
LINC01340-201ENST00000504012 RTL5Q5HYW3 569 aaPredicted RBP8.27□□□□□ -1.09
LINC01340-201ENST00000504012 CCDC136Q96JN2 1154 aa8.27□□□□□ -1.09
LINC01340-201ENST00000504012 RB1CC1Q8TDY2 1594 aa8.27□□□□□ -1.09
LINC01340-201ENST00000504012 DCAF8L2P0C7V8 631 aa8.26□□□□□ -1.09
LINC01340-201ENST00000504012 ABCC9O60706 1549 aa8.25□□□□□ -1.09
LINC01340-201ENST00000504012 TMEM132AQ24JP5 1023 aa8.25□□□□□ -1.09
LINC01340-201ENST00000504012 VSIG10Q8N0Z9 540 aa8.25□□□□□ -1.09
LINC01340-201ENST00000504012 TNIKQ9UKE5 1360 aa8.24□□□□□ -1.09
LINC01340-201ENST00000504012 HAP1P54257 671 aaPredicted RBP8.24□□□□□ -1.09
LINC01340-201ENST00000504012 PPP4R2Q9NY27 417 aa8.23□□□□□ -1.09
LINC01340-201ENST00000504012 DNAJC5BQ9UF47 199 aa8.23□□□□□ -1.09
LINC01340-201ENST00000504012 IL27Q8NEV9 243 aa8.22□□□□□ -1.09
LINC01340-201ENST00000504012 IPO9Q96P70 1041 aaKnown RBP8.2□□□□□ -1.1
LINC01340-201ENST00000504012 EEA1Q15075 1411 aa8.19□□□□□ -1.1
LINC01340-201ENST00000504012 CEP162Q5TB80 1403 aa8.19□□□□□ -1.1
LINC01340-201ENST00000504012 RSF1Q96T23 1441 aaPredicted RBP8.19□□□□□ -1.1
LINC01340-201ENST00000504012 C14orf37Q86TY3 774 aa8.18□□□□□ -1.1
LINC01340-201ENST00000504012 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.18□□□□□ -1.1
LINC01340-201ENST00000504012 ITGAEP38570 1179 aa8.17□□□□□ -1.1
LINC01340-201ENST00000504012 FAM43AQ8N2R8 423 aa8.17□□□□□ -1.1
LINC01340-201ENST00000504012 PPM1GO15355 546 aaPredicted RBP8.16□□□□□ -1.1
LINC01340-201ENST00000504012 ZBTB47Q9UFB7 747 aaPredicted RBP8.16□□□□□ -1.1
LINC01340-201ENST00000504012 DHX57Q6P158 1386 aaKnown RBP8.15□□□□□ -1.1
LINC01340-201ENST00000504012 ANP32AP39687 249 aaKnown RBP8.15□□□□□ -1.1
LINC01340-201ENST00000504012 ZMYND15Q9H091 742 aa8.15□□□□□ -1.1
LINC01340-201ENST00000504012 PLEKHG5O94827 1062 aa8.14□□□□□ -1.11
LINC01340-201ENST00000504012 NBR1Q14596 966 aa8.14□□□□□ -1.11
LINC01340-201ENST00000504012 NPM3O75607 178 aaKnown RBP8.13□□□□□ -1.11
LINC01340-201ENST00000504012 PAK3O75914 559 aaPredicted RBP8.13□□□□□ -1.11
LINC01340-201ENST00000504012 CUX2O14529 1486 aa8.12□□□□□ -1.11
LINC01340-201ENST00000504012 RRP9O43818 475 aaKnown RBP8.11□□□□□ -1.11
LINC01340-201ENST00000504012 PPP1R15AO75807 674 aaPredicted RBP8.11□□□□□ -1.11
LINC01340-201ENST00000504012 KCNH8Q96L42 1107 aa8.1□□□□□ -1.11
LINC01340-201ENST00000504012 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.1□□□□□ -1.11
LINC01340-201ENST00000504012 GSE1Q14687 1217 aa8.08□□□□□ -1.12
LINC01340-201ENST00000504012 ANP32CO43423 234 aa8.07□□□□□ -1.12
LINC01340-201ENST00000504012 HNRNPUL2Q1KMD3 747 aaKnown RBP8.07□□□□□ -1.12
LINC01340-201ENST00000504012 NCAPD3P42695 1498 aa8.06□□□□□ -1.12
LINC01340-201ENST00000504012 NACADO15069 1562 aa8.05□□□□□ -1.12
LINC01340-201ENST00000504012 CENPJQ9HC77 1338 aaPredicted RBP8.05□□□□□ -1.12
LINC01340-201ENST00000504012 NEFMP07197 916 aa8.04□□□□□ -1.12
LINC01340-201ENST00000504012 FGD1P98174 961 aa8.04□□□□□ -1.12
LINC01340-201ENST00000504012 EIF4G1Q04637 1599 aaKnown RBP8.02□□□□□ -1.13
LINC01340-201ENST00000504012 GOLGA3Q08378 1498 aa8.02□□□□□ -1.13
LINC01340-201ENST00000504012 CEP164Q9UPV0 1460 aa8.02□□□□□ -1.13
LINC01340-201ENST00000504012 HMGB1P09429 215 aaKnown RBP8.02□□□□□ -1.13
LINC01340-201ENST00000504012 AAMPQ13685 434 aa8.01□□□□□ -1.13
LINC01340-201ENST00000504012 HSP90AA2PQ14568 343 aaPredicted RBP8.01□□□□□ -1.13
LINC01340-201ENST00000504012 BRPF3Q9ULD4 1205 aa8.01□□□□□ -1.13
LINC01340-201ENST00000504012 VPS8Q8N3P4 1428 aa8.01□□□□□ -1.13
LINC01340-201ENST00000504012 TRIM52Q96A61 297 aa8□□□□□ -1.13
LINC01340-201ENST00000504012 DDRGK1Q96HY6 314 aa8□□□□□ -1.13
LINC01340-201ENST00000504012 MS4A1P11836 297 aa7.99□□□□□ -1.13
LINC01340-201ENST00000504012 PDE4CQ08493 712 aa7.99□□□□□ -1.13
LINC01340-201ENST00000504012 DDX10Q13206 875 aaKnown RBP7.99□□□□□ -1.13
LINC01340-201ENST00000504012 RNF123Q5XPI4 1314 aa7.99□□□□□ -1.13
LINC01340-201ENST00000504012 SMARCA2P51531 1590 aa7.98□□□□□ -1.13
LINC01340-201ENST00000504012 TCERG1O14776 1098 aaKnown RBP7.98□□□□□ -1.13
LINC01340-201ENST00000504012 HSP90AA1P07900 732 aaKnown RBP7.98□□□□□ -1.13
LINC01340-201ENST00000504012 CALD1Q05682 793 aaKnown RBP7.98□□□□□ -1.13
LINC01340-201ENST00000504012 PDIA4P13667 645 aaKnown RBP7.97□□□□□ -1.13
LINC01340-201ENST00000504012 RBM10P98175 930 aaKnown RBP7.97□□□□□ -1.13
LINC01340-201ENST00000504012 U3KPZ7 1027 aaPredicted RBP7.97□□□□□ -1.13
LINC01340-201ENST00000504012 RRBP1Q9P2E9 1410 aaKnown RBP7.96□□□□□ -1.13
LINC01340-201ENST00000504012 CLIP1P30622 1438 aa7.95□□□□□ -1.14
LINC01340-201ENST00000504012 BAZ1BQ9UIG0 1483 aaKnown RBP7.95□□□□□ -1.14
LINC01340-201ENST00000504012 KIF21BO75037 1637 aa7.94□□□□□ -1.14
LINC01340-201ENST00000504012 HNRNPUQ00839 825 aaKnown RBP eCLIP7.94□□□□□ -1.14
LINC01340-201ENST00000504012 ZBED9Q6R2W3 1325 aa7.94□□□□□ -1.14
LINC01340-201ENST00000504012 CLCN1P35523 988 aa7.93□□□□□ -1.14
LINC01340-201ENST00000504012 L1TD1Q5T7N2 865 aaKnown RBP7.93□□□□□ -1.14
LINC01340-201ENST00000504012 B4GALNT3Q6L9W6 998 aa7.93□□□□□ -1.14
LINC01340-201ENST00000504012 PDCL3Q9H2J4 239 aa7.93□□□□□ -1.14
LINC01340-201ENST00000504012 CDK11BP21127 795 aaKnown RBP7.92□□□□□ -1.14
LINC01340-201ENST00000504012 FRAT1Q92837 279 aaPredicted RBP7.92□□□□□ -1.14
LINC01340-201ENST00000504012 SMG6Q86US8 1419 aaKnown RBP7.92□□□□□ -1.14
LINC01340-201ENST00000504012 TPM2P07951 284 aa7.91□□□□□ -1.14
LINC01340-201ENST00000504012 NCLP19338 710 aaKnown RBP7.91□□□□□ -1.14
LINC01340-201ENST00000504012 NFKBIBQ15653 356 aa7.91□□□□□ -1.14
LINC01340-201ENST00000504012 MAPKBP1O60336 1514 aa7.9□□□□□ -1.14
LINC01340-201ENST00000504012 UBTFP17480 764 aaKnown RBP7.9□□□□□ -1.14
LINC01340-201ENST00000504012 ZNF326Q5BKZ1 582 aaKnown RBP7.9□□□□□ -1.14
LINC01340-201ENST00000504012 TAF7LQ5H9L4 462 aa7.9□□□□□ -1.14
LINC01340-201ENST00000504012 BACH2Q9BYV9 841 aa7.9□□□□□ -1.14
LINC01340-201ENST00000504012 SPINK5Q9NQ38 1064 aaPredicted RBP7.9□□□□□ -1.14
LINC01340-201ENST00000504012 PRDM4Q9UKN5 801 aa7.9□□□□□ -1.14
LINC01340-201ENST00000504012 WDR97A6NE52 1622 aa7.89□□□□□ -1.15
LINC01340-201ENST00000504012 PEG3Q9GZU2 1588 aa7.89□□□□□ -1.15
LINC01340-201ENST00000504012 IRX6P78412 446 aaPredicted RBP7.89□□□□□ -1.15
LINC01340-201ENST00000504012 MAP7D2Q96T17 732 aa7.89□□□□□ -1.15
LINC01340-201ENST00000504012 PNNQ9H307 717 aaKnown RBP7.89□□□□□ -1.15
LINC01340-201ENST00000504012 KDM2AQ9Y2K7 1162 aa7.89□□□□□ -1.15
LINC01340-201ENST00000504012 CCDC88BA6NC98 1476 aa7.87□□□□□ -1.15
LINC01340-201ENST00000504012 HSP90B1P14625 803 aaKnown RBP7.87□□□□□ -1.15
LINC01340-201ENST00000504012 PDE4AP27815 886 aa7.87□□□□□ -1.15
LINC01340-201ENST00000504012 ABCC8Q09428 1581 aa7.86□□□□□ -1.15
LINC01340-201ENST00000504012 BRD2P25440 801 aaKnown RBP7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms