RNA–Protein interactions for RNA: ENST00000502929.5

MATR3-232, Transcript of matrin 3, humanhuman

TSL 2 BASIC

Gene MATR3, Length 4,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-232ENST00000502929 ABCA10Q8WWZ4 1543 aa11.9□□□□□ -0.5
MATR3-232ENST00000502929 DIEXFQ68CQ4 756 aaKnown RBP11.89□□□□□ -0.51
MATR3-232ENST00000502929 CCNB3Q8WWL7 1395 aa11.87□□□□□ -0.51
MATR3-232ENST00000502929 MTUS2Q5JR59 1369 aa11.87□□□□□ -0.51
MATR3-232ENST00000502929 CHMP7Q8WUX9 453 aaPredicted RBP11.84□□□□□ -0.51
MATR3-232ENST00000502929 AQRO60306 1485 aaKnown RBP eCLIP11.84□□□□□ -0.512e-7■■■■□ 23.3
MATR3-232ENST00000502929 ZNF316A6NFI3 1004 aaPredicted RBP11.83□□□□□ -0.51
MATR3-232ENST00000502929 MRC2Q9UBG0 1479 aa11.8□□□□□ -0.52
MATR3-232ENST00000502929 NEUROD1Q13562 356 aa11.8□□□□□ -0.52
MATR3-232ENST00000502929 FMN1Q68DA7 1419 aa11.8□□□□□ -0.52
MATR3-232ENST00000502929 KIF21AQ7Z4S6 1674 aa11.79□□□□□ -0.52
MATR3-232ENST00000502929 CUL7Q14999 1698 aa11.77□□□□□ -0.53
MATR3-232ENST00000502929 YTHDC1Q96MU7 727 aaKnown RBP11.77□□□□□ -0.53
MATR3-232ENST00000502929 LRRC9Q6ZRR7 1453 aa11.75□□□□□ -0.53
MATR3-232ENST00000502929 CHIC2Q9UKJ5 165 aa11.74□□□□□ -0.53
MATR3-232ENST00000502929 TIAM1Q13009 1591 aa11.73□□□□□ -0.53
MATR3-232ENST00000502929 PHLDB1Q86UU1 1377 aa11.73□□□□□ -0.53
MATR3-232ENST00000502929 GRIN2BQ13224 1484 aa11.73□□□□□ -0.53
MATR3-232ENST00000502929 EFCAB5A4FU69 1503 aa11.72□□□□□ -0.53
MATR3-232ENST00000502929 CENPBP07199 599 aaPredicted RBP11.72□□□□□ -0.53
MATR3-232ENST00000502929 TRIM52Q96A61 297 aa11.72□□□□□ -0.53
MATR3-232ENST00000502929 RRBP1Q9P2E9 1410 aaKnown RBP11.72□□□□□ -0.53
MATR3-232ENST00000502929 PCF11O94913 1555 aaKnown RBP11.72□□□□□ -0.53
MATR3-232ENST00000502929 CASKIN1Q8WXD9 1431 aa11.72□□□□□ -0.53
MATR3-232ENST00000502929 CDK11AQ9UQ88 783 aaPredicted RBP11.72□□□□□ -0.53
MATR3-232ENST00000502929 RAB3GAP2Q9H2M9 1393 aa11.71□□□□□ -0.53
MATR3-232ENST00000502929 IFT140Q96RY7 1462 aa11.7□□□□□ -0.54
MATR3-232ENST00000502929 DHX57Q6P158 1386 aaKnown RBP11.7□□□□□ -0.54
MATR3-232ENST00000502929 FYCO1Q9BQS8 1478 aa11.7□□□□□ -0.54
MATR3-232ENST00000502929 ZNF608Q9ULD9 1512 aaPredicted RBP11.7□□□□□ -0.54
MATR3-232ENST00000502929 ZNF777Q9ULD5 760 aaPredicted RBP11.69□□□□□ -0.54
MATR3-232ENST00000502929 CLSPNQ9HAW4 1339 aa11.69□□□□□ -0.54
MATR3-232ENST00000502929 SETD5Q9C0A6 1442 aa11.68□□□□□ -0.54
MATR3-232ENST00000502929 RRP7BPQ9NSQ0 103 aa11.68□□□□□ -0.54
MATR3-232ENST00000502929 ABCA5Q8WWZ7 1642 aa11.66□□□□□ -0.54
MATR3-232ENST00000502929 SNAPC4Q5SXM2 1469 aa11.65□□□□□ -0.54
MATR3-232ENST00000502929 CTTNBP2Q8WZ74 1663 aa11.65□□□□□ -0.54
MATR3-232ENST00000502929 SIN3AQ96ST3 1273 aa11.65□□□□□ -0.54
MATR3-232ENST00000502929 MAP3K1Q13233 1512 aa11.63□□□□□ -0.55
MATR3-232ENST00000502929 TARBP1Q13395 1621 aaKnown RBP11.62□□□□□ -0.55
MATR3-232ENST00000502929 JPH4Q96JJ6 628 aa11.62□□□□□ -0.55
MATR3-232ENST00000502929 IQGAP2Q13576 1575 aa11.61□□□□□ -0.55
MATR3-232ENST00000502929 FGD6Q6ZV73 1430 aa11.61□□□□□ -0.55
MATR3-232ENST00000502929 WDR97A6NE52 1622 aa11.6□□□□□ -0.55
MATR3-232ENST00000502929 NCOA2Q15596 1464 aa11.59□□□□□ -0.55
MATR3-232ENST00000502929 MIER1Q8N108 512 aa11.59□□□□□ -0.55
MATR3-232ENST00000502929 CARMIL2Q6F5E8 1435 aa11.59□□□□□ -0.55
MATR3-232ENST00000502929 TONSLQ96HA7 1378 aa11.59□□□□□ -0.55
MATR3-232ENST00000502929 PLEKHD1A6NEE1 506 aa11.58□□□□□ -0.56
MATR3-232ENST00000502929 PBRM1Q86U86 1689 aa11.58□□□□□ -0.56
MATR3-232ENST00000502929 CFDP1Q9UEE9 299 aaPredicted RBP11.57□□□□□ -0.56
MATR3-232ENST00000502929 ADAMTS12P58397 1594 aa11.57□□□□□ -0.56
MATR3-232ENST00000502929 MYOM3Q5VTT5 1437 aa11.57□□□□□ -0.56
MATR3-232ENST00000502929 WDR62O43379 1518 aa11.57□□□□□ -0.56
MATR3-232ENST00000502929 KIAA0586Q9BVV6 1533 aa11.56□□□□□ -0.56
MATR3-232ENST00000502929 GRIN2AQ12879 1464 aa11.56□□□□□ -0.56
MATR3-232ENST00000502929 CCDC18Q5T9S5 1454 aa11.56□□□□□ -0.56
MATR3-232ENST00000502929 CFAP43Q8NDM7 1665 aa11.55□□□□□ -0.56
MATR3-232ENST00000502929 HIRIP3Q9BW71 556 aaPredicted RBP11.55□□□□□ -0.56
MATR3-232ENST00000502929 CDK13Q14004 1512 aaKnown RBP11.54□□□□□ -0.56
MATR3-232ENST00000502929 EHBP1L1Q8N3D4 1523 aa11.53□□□□□ -0.56
MATR3-232ENST00000502929 EPRSP07814 1512 aaKnown RBP11.52□□□□□ -0.56
MATR3-232ENST00000502929 EIF4G3O43432 1585 aaKnown RBP11.52□□□□□ -0.56
MATR3-232ENST00000502929 HECW1Q76N89 1606 aa11.52□□□□□ -0.56
MATR3-232ENST00000502929 ACIN1Q9UKV3 1341 aaKnown RBP11.52□□□□□ -0.56
MATR3-232ENST00000502929 MAGI1Q96QZ7 1491 aaPredicted RBP11.51□□□□□ -0.57
MATR3-232ENST00000502929 SAMD9Q5K651 1589 aa11.51□□□□□ -0.57
MATR3-232ENST00000502929 SYNJ2O15056 1496 aa11.51□□□□□ -0.57
MATR3-232ENST00000502929 SUPT6HQ7KZ85 1726 aaKnown RBP11.5□□□□□ -0.57
MATR3-232ENST00000502929 DDX10Q13206 875 aaKnown RBP11.5□□□□□ -0.57
MATR3-232ENST00000502929 ZNF644Q9H582 1327 aaPredicted RBP11.49□□□□□ -0.57
MATR3-232ENST00000502929 SLC4A1APQ9BWU0 796 aaKnown RBP11.49□□□□□ -0.57
MATR3-232ENST00000502929 KCNH8Q96L42 1107 aa11.48□□□□□ -0.57
MATR3-232ENST00000502929 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.48□□□□□ -0.575e-19■■□□□ 13.5
MATR3-232ENST00000502929 TSPY4P0CV99 314 aa11.48□□□□□ -0.57
MATR3-232ENST00000502929 TSPY10P0CW01 314 aa11.48□□□□□ -0.57
MATR3-232ENST00000502929 MYT1LQ9UL68 1186 aa11.48□□□□□ -0.57
MATR3-232ENST00000502929 ZNF326Q5BKZ1 582 aaKnown RBP11.47□□□□□ -0.57
MATR3-232ENST00000502929 FOXD1Q16676 465 aa11.47□□□□□ -0.57
MATR3-232ENST00000502929 UGGT2Q9NYU1 1516 aa11.46□□□□□ -0.58
MATR3-232ENST00000502929 GTF3C3Q9Y5Q9 886 aa11.46□□□□□ -0.58
MATR3-232ENST00000502929 PLB1Q6P1J6 1458 aa11.46□□□□□ -0.58
MATR3-232ENST00000502929 THOC2Q8NI27 1593 aaKnown RBP11.46□□□□□ -0.58
MATR3-232ENST00000502929 PTPRGP23470 1445 aa11.45□□□□□ -0.58
MATR3-232ENST00000502929 PRG4Q92954 1404 aaPredicted RBP11.45□□□□□ -0.58
MATR3-232ENST00000502929 POLR3GLQ9BT43 218 aa11.44□□□□□ -0.58
MATR3-232ENST00000502929 SCAF1Q9H7N4 1312 aaKnown RBP11.44□□□□□ -0.58
MATR3-232ENST00000502929 TIMELESSQ9UNS1 1208 aa11.44□□□□□ -0.58
MATR3-232ENST00000502929 HFM1A2PYH4 1435 aa11.43□□□□□ -0.58
MATR3-232ENST00000502929 PTPRKQ15262 1439 aa11.43□□□□□ -0.58
MATR3-232ENST00000502929 PPP1R15AO75807 674 aaPredicted RBP11.43□□□□□ -0.58
MATR3-232ENST00000502929 PTPN23Q9H3S7 1636 aa11.43□□□□□ -0.58
MATR3-232ENST00000502929 MPHOSPH9Q99550 1183 aa11.43□□□□□ -0.58
MATR3-232ENST00000502929 KIAA0556O60303 1618 aa11.43□□□□□ -0.58
MATR3-232ENST00000502929 DISP1Q96F81 1524 aa11.42□□□□□ -0.58
MATR3-232ENST00000502929 UACAQ9BZF9 1416 aa11.42□□□□□ -0.58
MATR3-232ENST00000502929 NAIPQ13075 1403 aa11.42□□□□□ -0.58
MATR3-232ENST00000502929 TROQ12816 1431 aaPredicted RBP11.41□□□□□ -0.58
MATR3-232ENST00000502929 MIA2Q96PC5 1412 aa11.41□□□□□ -0.58
MATR3-232ENST00000502929 NUP153P49790 1475 aaKnown RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms