RNA–Protein interactions for RNA: ENST00000502653.5

RUFY3-204, Transcript of RUN and FYVE domain containing 3, humanhuman

TSL 2 BASIC

Gene RUFY3, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY3-204ENST00000502653 WDR97A6NE52 1622 aa14.02□□□□□ -0.17
RUFY3-204ENST00000502653 RRBP1Q9P2E9 1410 aaKnown RBP14.01□□□□□ -0.17
RUFY3-204ENST00000502653 ABCA5Q8WWZ7 1642 aa14.01□□□□□ -0.17
RUFY3-204ENST00000502653 TIAM1Q13009 1591 aa14□□□□□ -0.17
RUFY3-204ENST00000502653 AQRO60306 1485 aaKnown RBP eCLIP13.99□□□□□ -0.172e-6■■■□□ 18.3
RUFY3-204ENST00000502653 LRRC9Q6ZRR7 1453 aa13.98□□□□□ -0.17
RUFY3-204ENST00000502653 FAM50AQ14320 339 aaKnown RBP13.97□□□□□ -0.17
RUFY3-204ENST00000502653 MRC2Q9UBG0 1479 aa13.97□□□□□ -0.17
RUFY3-204ENST00000502653 DIEXFQ68CQ4 756 aaKnown RBP13.97□□□□□ -0.17
RUFY3-204ENST00000502653 CTTNBP2Q8WZ74 1663 aa13.97□□□□□ -0.17
RUFY3-204ENST00000502653 TARBP1Q13395 1621 aaKnown RBP13.97□□□□□ -0.17
RUFY3-204ENST00000502653 PCF11O94913 1555 aaKnown RBP13.97□□□□□ -0.17
RUFY3-204ENST00000502653 MAP3K1Q13233 1512 aa13.96□□□□□ -0.18
RUFY3-204ENST00000502653 EFCAB5A4FU69 1503 aa13.95□□□□□ -0.18
RUFY3-204ENST00000502653 PHLDB1Q86UU1 1377 aa13.94□□□□□ -0.18
RUFY3-204ENST00000502653 ZNF316A6NFI3 1004 aaPredicted RBP13.93□□□□□ -0.18
RUFY3-204ENST00000502653 FMN1Q68DA7 1419 aa13.93□□□□□ -0.18
RUFY3-204ENST00000502653 CASKIN1Q8WXD9 1431 aa13.93□□□□□ -0.18
RUFY3-204ENST00000502653 DHX57Q6P158 1386 aaKnown RBP13.92□□□□□ -0.18
RUFY3-204ENST00000502653 FYCO1Q9BQS8 1478 aa13.91□□□□□ -0.18
RUFY3-204ENST00000502653 ERCC6Q03468 1493 aa13.9□□□□□ -0.18
RUFY3-204ENST00000502653 ZNF608Q9ULD9 1512 aaPredicted RBP13.88□□□□□ -0.19
RUFY3-204ENST00000502653 MTUS2Q5JR59 1369 aa13.87□□□□□ -0.19
RUFY3-204ENST00000502653 GRIN2BQ13224 1484 aa13.87□□□□□ -0.19
RUFY3-204ENST00000502653 PBRM1Q86U86 1689 aa13.87□□□□□ -0.19
RUFY3-204ENST00000502653 CFAP43Q8NDM7 1665 aa13.87□□□□□ -0.19
RUFY3-204ENST00000502653 CLSPNQ9HAW4 1339 aa13.86□□□□□ -0.19
RUFY3-204ENST00000502653 IFT140Q96RY7 1462 aa13.86□□□□□ -0.19
RUFY3-204ENST00000502653 RAB3GAP2Q9H2M9 1393 aa13.85□□□□□ -0.19
RUFY3-204ENST00000502653 SNAPC4Q5SXM2 1469 aa13.84□□□□□ -0.19
RUFY3-204ENST00000502653 SAMD9Q5K651 1589 aa13.84□□□□□ -0.19
RUFY3-204ENST00000502653 ARID3CA6NKF2 412 aa13.84□□□□□ -0.19
RUFY3-204ENST00000502653 WDR62O43379 1518 aa13.83□□□□□ -0.2
RUFY3-204ENST00000502653 FBLN2P98095 1184 aa13.82□□□□□ -0.2
RUFY3-204ENST00000502653 SETD5Q9C0A6 1442 aa13.81□□□□□ -0.2
RUFY3-204ENST00000502653 ADAMTS12P58397 1594 aa13.81□□□□□ -0.2
RUFY3-204ENST00000502653 IQGAP2Q13576 1575 aa13.79□□□□□ -0.2
RUFY3-204ENST00000502653 CHMP7Q8WUX9 453 aaPredicted RBP13.78□□□□□ -0.2
RUFY3-204ENST00000502653 FGD6Q6ZV73 1430 aa13.76□□□□□ -0.21
RUFY3-204ENST00000502653 LRRIQ1Q96JM4 1722 aa13.74□□□□□ -0.21
RUFY3-204ENST00000502653 NCOA2Q15596 1464 aa13.74□□□□□ -0.21
RUFY3-204ENST00000502653 NEUROD1Q13562 356 aa13.74□□□□□ -0.21
RUFY3-204ENST00000502653 EIF4G3O43432 1585 aaKnown RBP13.74□□□□□ -0.21
RUFY3-204ENST00000502653 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.72□□□□□ -0.21
RUFY3-204ENST00000502653 KIAA0586Q9BVV6 1533 aa13.71□□□□□ -0.21
RUFY3-204ENST00000502653 SIN3AQ96ST3 1273 aa13.71□□□□□ -0.21
RUFY3-204ENST00000502653 GRIN2AQ12879 1464 aa13.71□□□□□ -0.21
RUFY3-204ENST00000502653 MYOM3Q5VTT5 1437 aa13.7□□□□□ -0.22
RUFY3-204ENST00000502653 THOC2Q8NI27 1593 aaKnown RBP13.7□□□□□ -0.22
RUFY3-204ENST00000502653 CCDC18Q5T9S5 1454 aa13.7□□□□□ -0.22
RUFY3-204ENST00000502653 MIER1Q8N108 512 aa13.69□□□□□ -0.22
RUFY3-204ENST00000502653 EPRSP07814 1512 aaKnown RBP13.69□□□□□ -0.22
RUFY3-204ENST00000502653 MAGI3Q5TCQ9 1506 aa13.69□□□□□ -0.22
RUFY3-204ENST00000502653 EHBP1L1Q8N3D4 1523 aa13.69□□□□□ -0.22
RUFY3-204ENST00000502653 UGGT2Q9NYU1 1516 aa13.69□□□□□ -0.22
RUFY3-204ENST00000502653 SUPT6HQ7KZ85 1726 aaKnown RBP13.68□□□□□ -0.22
RUFY3-204ENST00000502653 HECW1Q76N89 1606 aa13.68□□□□□ -0.22
RUFY3-204ENST00000502653 CHIC2Q9UKJ5 165 aa13.68□□□□□ -0.22
RUFY3-204ENST00000502653 CDK13Q14004 1512 aaKnown RBP13.68□□□□□ -0.22
RUFY3-204ENST00000502653 MAPKBP1O60336 1514 aa13.68□□□□□ -0.22
RUFY3-204ENST00000502653 PTPRKQ15262 1439 aa13.67□□□□□ -0.22
RUFY3-204ENST00000502653 DISP1Q96F81 1524 aa13.66□□□□□ -0.22
RUFY3-204ENST00000502653 MAGI1Q96QZ7 1491 aaPredicted RBP13.66□□□□□ -0.22
RUFY3-204ENST00000502653 YTHDC1Q96MU7 727 aaKnown RBP13.65□□□□□ -0.22
RUFY3-204ENST00000502653 RRP7BPQ9NSQ0 103 aa13.65□□□□□ -0.22
RUFY3-204ENST00000502653 SYNJ2O15056 1496 aa13.65□□□□□ -0.22
RUFY3-204ENST00000502653 JPH4Q96JJ6 628 aa13.64□□□□□ -0.23
RUFY3-204ENST00000502653 KIAA0556O60303 1618 aa13.63□□□□□ -0.23
RUFY3-204ENST00000502653 CENPBP07199 599 aaPredicted RBP13.63□□□□□ -0.23
RUFY3-204ENST00000502653 PTPN23Q9H3S7 1636 aa13.62□□□□□ -0.23
RUFY3-204ENST00000502653 CDK11AQ9UQ88 783 aaPredicted RBP13.62□□□□□ -0.23
RUFY3-204ENST00000502653 SCAF1Q9H7N4 1312 aaKnown RBP13.61□□□□□ -0.23
RUFY3-204ENST00000502653 ACIN1Q9UKV3 1341 aaKnown RBP13.61□□□□□ -0.23
RUFY3-204ENST00000502653 CEP170Q5SW79 1584 aa13.6□□□□□ -0.23
RUFY3-204ENST00000502653 HFM1A2PYH4 1435 aa13.6□□□□□ -0.23
RUFY3-204ENST00000502653 ARHGEF11O15085 1522 aa13.59□□□□□ -0.23
RUFY3-204ENST00000502653 TRIM52Q96A61 297 aa13.58□□□□□ -0.23
RUFY3-204ENST00000502653 NAIPQ13075 1403 aa13.58□□□□□ -0.24
RUFY3-204ENST00000502653 NUP153P49790 1475 aaKnown RBP13.58□□□□□ -0.24
RUFY3-204ENST00000502653 CARMIL2Q6F5E8 1435 aa13.57□□□□□ -0.24
RUFY3-204ENST00000502653 PLB1Q6P1J6 1458 aa13.57□□□□□ -0.24
RUFY3-204ENST00000502653 RAPGEF6Q8TEU7 1601 aa13.56□□□□□ -0.24
RUFY3-204ENST00000502653 ZNF644Q9H582 1327 aaPredicted RBP13.56□□□□□ -0.24
RUFY3-204ENST00000502653 AEBP2Q6ZN18 517 aaPredicted RBP13.56□□□□□ -0.24
RUFY3-204ENST00000502653 UACAQ9BZF9 1416 aa13.55□□□□□ -0.24
RUFY3-204ENST00000502653 MIA2Q96PC5 1412 aa13.55□□□□□ -0.24
RUFY3-204ENST00000502653 NUP160Q12769 1436 aa13.54□□□□□ -0.24
RUFY3-204ENST00000502653 TIMELESSQ9UNS1 1208 aa13.54□□□□□ -0.24
RUFY3-204ENST00000502653 TCOF1Q13428 1488 aaKnown RBP13.54□□□□□ -0.24
RUFY3-204ENST00000502653 PRG4Q92954 1404 aaPredicted RBP13.54□□□□□ -0.24
RUFY3-204ENST00000502653 ZNF777Q9ULD5 760 aaPredicted RBP13.53□□□□□ -0.24
RUFY3-204ENST00000502653 PPP1R15AO75807 674 aaPredicted RBP13.53□□□□□ -0.24
RUFY3-204ENST00000502653 TONSLQ96HA7 1378 aa13.52□□□□□ -0.24
RUFY3-204ENST00000502653 HIRIP3Q9BW71 556 aaPredicted RBP13.52□□□□□ -0.25
RUFY3-204ENST00000502653 CFDP1Q9UEE9 299 aaPredicted RBP13.52□□□□□ -0.25
RUFY3-204ENST00000502653 PLEKHD1A6NEE1 506 aa13.5□□□□□ -0.25
RUFY3-204ENST00000502653 TROQ12816 1431 aaPredicted RBP13.48□□□□□ -0.25
RUFY3-204ENST00000502653 GTF3C3Q9Y5Q9 886 aa13.47□□□□□ -0.25
RUFY3-204ENST00000502653 DAPK1P53355 1430 aa13.47□□□□□ -0.25
RUFY3-204ENST00000502653 FOXD1Q16676 465 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms