RNA–Protein interactions for RNA: ENST00000502653.5

RUFY3-204, Transcript of RUN and FYVE domain containing 3, humanhuman

TSL 2 BASIC

Gene RUFY3, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY3-204ENST00000502653 NISCHQ9Y2I1 1504 aa20.14■□□□□ 0.81
RUFY3-204ENST00000502653 CCDC180Q9P1Z9 1646 aa17.21■□□□□ 0.35
RUFY3-204ENST00000502653 SHROOM4Q9ULL8 1493 aa17.06■□□□□ 0.32
RUFY3-204ENST00000502653 DCAF8L2P0C7V8 631 aa16.96■□□□□ 0.31
RUFY3-204ENST00000502653 ZCCHC6Q5VYS8 1495 aaKnown RBP16.95■□□□□ 0.3
RUFY3-204ENST00000502653 SUPT5HO00267 1087 aaKnown RBP16.63■□□□□ 0.25
RUFY3-204ENST00000502653 DCAF1Q9Y4B6 1507 aa16.49■□□□□ 0.23
RUFY3-204ENST00000502653 ABCC9O60706 1549 aa16.28■□□□□ 0.2
RUFY3-204ENST00000502653 SCRIBQ14160 1630 aa16.14■□□□□ 0.17
RUFY3-204ENST00000502653 MYO15BQ96JP2 1530 aa16.12■□□□□ 0.17
RUFY3-204ENST00000502653 NACADO15069 1562 aa16.02■□□□□ 0.16
RUFY3-204ENST00000502653 CHIC1Q5VXU3 224 aa15.97■□□□□ 0.15
RUFY3-204ENST00000502653 RSF1Q96T23 1441 aaPredicted RBP15.84■□□□□ 0.13
RUFY3-204ENST00000502653 RB1CC1Q8TDY2 1594 aa15.83■□□□□ 0.12
RUFY3-204ENST00000502653 CECR2Q9BXF3 1484 aa15.75■□□□□ 0.11
RUFY3-204ENST00000502653 MROH2BQ7Z745 1585 aa15.65■□□□□ 0.1
RUFY3-204ENST00000502653 PABPN1Q86U42 306 aaKnown RBP eCLIP15.56■□□□□ 0.08
RUFY3-204ENST00000502653 WIZO95785 1651 aa15.55■□□□□ 0.08
RUFY3-204ENST00000502653 LOC105371045A0A1W2PR82 267 aa15.53■□□□□ 0.08
RUFY3-204ENST00000502653 UNC13AQ9UPW8 1703 aa15.52■□□□□ 0.08
RUFY3-204ENST00000502653 TRIM41Q8WV44 630 aa15.51■□□□□ 0.07
RUFY3-204ENST00000502653 BAZ1AQ9NRL2 1556 aaPredicted RBP15.5■□□□□ 0.07
RUFY3-204ENST00000502653 FAM9AQ8IZU1 332 aaPredicted RBP15.39■□□□□ 0.05
RUFY3-204ENST00000502653 SMARCA4P51532 1647 aa15.38■□□□□ 0.05
RUFY3-204ENST00000502653 BICRAQ9NZM4 1560 aa15.36■□□□□ 0.05
RUFY3-204ENST00000502653 EHMT2Q96KQ7 1210 aa15.3■□□□□ 0.04
RUFY3-204ENST00000502653 TOP2AP11388 1531 aaKnown RBP15.29■□□□□ 0.04
RUFY3-204ENST00000502653 CCDC88BA6NC98 1476 aa15.25■□□□□ 0.03
RUFY3-204ENST00000502653 PCGF6Q9BYE7 350 aa15.24■□□□□ 0.03
RUFY3-204ENST00000502653 SMARCA2P51531 1590 aa15.19■□□□□ 0.02
RUFY3-204ENST00000502653 EIF4G1Q04637 1599 aaKnown RBP15.12■□□□□ 0.01
RUFY3-204ENST00000502653 ABCC8Q09428 1581 aa15.11■□□□□ 0.01
RUFY3-204ENST00000502653 ATAD2BQ9ULI0 1458 aa15.08■□□□□ 0.01
RUFY3-204ENST00000502653 PEG3Q9GZU2 1588 aa15.07■□□□□ 0
RUFY3-204ENST00000502653 BAZ1BQ9UIG0 1483 aaKnown RBP15.05■□□□□ -0
RUFY3-204ENST00000502653 TRIM26Q12899 539 aaPredicted RBP14.99□□□□□ -0.01
RUFY3-204ENST00000502653 HRCP23327 699 aa14.98□□□□□ -0.01
RUFY3-204ENST00000502653 SOGA1O94964 1423 aa14.94□□□□□ -0.02
RUFY3-204ENST00000502653 WRNQ14191 1432 aaPredicted RBP eCLIP14.92□□□□□ -0.02
RUFY3-204ENST00000502653 PPARGC1BQ86YN6 1023 aaKnown RBP14.88□□□□□ -0.03
RUFY3-204ENST00000502653 CSRNP3Q8WYN3 585 aa14.87□□□□□ -0.03
RUFY3-204ENST00000502653 RUSC2Q8N2Y8 1516 aa14.87□□□□□ -0.03
RUFY3-204ENST00000502653 UBTFP17480 764 aaKnown RBP14.84□□□□□ -0.03
RUFY3-204ENST00000502653 NCAPD3P42695 1498 aa14.84□□□□□ -0.03
RUFY3-204ENST00000502653 SYNJ1O43426 1573 aa14.8□□□□□ -0.04
RUFY3-204ENST00000502653 EEA1Q15075 1411 aa14.79□□□□□ -0.04
RUFY3-204ENST00000502653 HMGXB3Q12766 1538 aa14.78□□□□□ -0.04
RUFY3-204ENST00000502653 TNIKQ9UKE5 1360 aa14.73□□□□□ -0.05
RUFY3-204ENST00000502653 CEP162Q5TB80 1403 aa14.72□□□□□ -0.05
RUFY3-204ENST00000502653 TTBK1Q5TCY1 1321 aaPredicted RBP14.71□□□□□ -0.05
RUFY3-204ENST00000502653 GOLGA3Q08378 1498 aa14.69□□□□□ -0.06
RUFY3-204ENST00000502653 RANGAP1P46060 587 aaPredicted RBP14.65□□□□□ -0.06
RUFY3-204ENST00000502653 TOP2BQ02880 1626 aa14.65□□□□□ -0.06
RUFY3-204ENST00000502653 CFTRP13569 1480 aa14.64□□□□□ -0.07
RUFY3-204ENST00000502653 CEP164Q9UPV0 1460 aa14.64□□□□□ -0.07
RUFY3-204ENST00000502653 CC2D2AQ9P2K1 1620 aa14.62□□□□□ -0.07
RUFY3-204ENST00000502653 CUX1P39880 1505 aa14.58□□□□□ -0.08
RUFY3-204ENST00000502653 BIVM-ERCC5R4GMW8 1640 aa14.57□□□□□ -0.08
RUFY3-204ENST00000502653 RAPGEF2Q9Y4G8 1499 aa14.57□□□□□ -0.08
RUFY3-204ENST00000502653 CADPSQ9ULU8 1353 aa14.57□□□□□ -0.08
RUFY3-204ENST00000502653 KIF21BO75037 1637 aa14.56□□□□□ -0.08
RUFY3-204ENST00000502653 ZEB1P37275 1124 aaPredicted RBP14.54□□□□□ -0.08
RUFY3-204ENST00000502653 CLIP1P30622 1438 aa14.53□□□□□ -0.08
RUFY3-204ENST00000502653 KIF27Q86VH2 1401 aa14.49□□□□□ -0.09
RUFY3-204ENST00000502653 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.48□□□□□ -0.09
RUFY3-204ENST00000502653 APLP2Q06481 763 aa14.46□□□□□ -0.09
RUFY3-204ENST00000502653 CCER1Q8TC90 406 aaPredicted RBP14.44□□□□□ -0.1
RUFY3-204ENST00000502653 PRXQ9BXM0 1461 aa14.44□□□□□ -0.1
RUFY3-204ENST00000502653 PRDM2Q13029 1718 aa14.43□□□□□ -0.1
RUFY3-204ENST00000502653 FANCD2Q9BXW9 1451 aa14.42□□□□□ -0.1
RUFY3-204ENST00000502653 CUX2O14529 1486 aa14.41□□□□□ -0.1
RUFY3-204ENST00000502653 VPS8Q8N3P4 1428 aa14.41□□□□□ -0.1
RUFY3-204ENST00000502653 NESP48681 1621 aa14.4□□□□□ -0.1
RUFY3-204ENST00000502653 ERICH3Q5RHP9 1530 aa14.39□□□□□ -0.11
RUFY3-204ENST00000502653 FGD5Q6ZNL6 1462 aa14.39□□□□□ -0.11
RUFY3-204ENST00000502653 DNAJC5BQ9UF47 199 aa14.38□□□□□ -0.11
RUFY3-204ENST00000502653 IGF1RP08069 1367 aa14.36□□□□□ -0.11
RUFY3-204ENST00000502653 HNRNPUL2Q1KMD3 747 aaKnown RBP14.33□□□□□ -0.12
RUFY3-204ENST00000502653 CARMIL1Q5VZK9 1371 aa14.31□□□□□ -0.12
RUFY3-204ENST00000502653 RAD54L2Q9Y4B4 1467 aa14.29□□□□□ -0.12
RUFY3-204ENST00000502653 ARAP1Q96P48 1450 aa14.28□□□□□ -0.12
RUFY3-204ENST00000502653 TOPBP1Q92547 1522 aa14.27□□□□□ -0.13
RUFY3-204ENST00000502653 DNMBPQ6XZF7 1577 aa14.26□□□□□ -0.13
RUFY3-204ENST00000502653 POLA1P09884 1462 aaPredicted RBP14.25□□□□□ -0.13
RUFY3-204ENST00000502653 KANK4Q5T7N3 995 aaPredicted RBP14.24□□□□□ -0.13
RUFY3-204ENST00000502653 LAMC3Q9Y6N6 1575 aa14.24□□□□□ -0.13
RUFY3-204ENST00000502653 ARHGAP35Q9NRY4 1499 aa14.23□□□□□ -0.13
RUFY3-204ENST00000502653 PDS5BQ9NTI5 1447 aa14.21□□□□□ -0.13
RUFY3-204ENST00000502653 P3H3Q8IVL6 736 aa14.21□□□□□ -0.13
RUFY3-204ENST00000502653 URB2Q14146 1524 aaKnown RBP14.19□□□□□ -0.14
RUFY3-204ENST00000502653 ABCA10Q8WWZ4 1543 aa14.19□□□□□ -0.14
RUFY3-204ENST00000502653 TDRD9Q8NDG6 1382 aaKnown RBP14.17□□□□□ -0.14
RUFY3-204ENST00000502653 ATP1B4Q9UN42 357 aaPredicted RBP14.17□□□□□ -0.14
RUFY3-204ENST00000502653 KIF21AQ7Z4S6 1674 aa14.1□□□□□ -0.15
RUFY3-204ENST00000502653 ITGAEP38570 1179 aa14.09□□□□□ -0.15
RUFY3-204ENST00000502653 GAPVD1Q14C86 1478 aa14.07□□□□□ -0.16
RUFY3-204ENST00000502653 FHOD3Q2V2M9 1422 aa14.05□□□□□ -0.16
RUFY3-204ENST00000502653 CUL7Q14999 1698 aa14.05□□□□□ -0.16
RUFY3-204ENST00000502653 FHAD1B1AJZ9 1412 aa14.04□□□□□ -0.16
RUFY3-204ENST00000502653 CCNB3Q8WWL7 1395 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms