RNA–Protein interactions for RNA: ENST00000498607.2

SCG5-209, Transcript of secretogranin V, humanhuman

TSL 2

Gene SCG5, Length 853 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG5-209ENST00000498607 SYNJ2O15056 1496 aa18.97■□□□□ 0.63
SCG5-209ENST00000498607 LOC105371045A0A1W2PR82 267 aa18.97■□□□□ 0.63
SCG5-209ENST00000498607 GRIN2AQ12879 1464 aa18.93■□□□□ 0.62
SCG5-209ENST00000498607 EHMT2Q96KQ7 1210 aa18.93■□□□□ 0.62
SCG5-209ENST00000498607 TNIKQ9UKE5 1360 aa18.91■□□□□ 0.62
SCG5-209ENST00000498607 CHD1O14646 1710 aa18.9■□□□□ 0.62
SCG5-209ENST00000498607 UBTFP17480 764 aaKnown RBP18.89■□□□□ 0.61
SCG5-209ENST00000498607 CTTNBP2Q8WZ74 1663 aa18.89■□□□□ 0.61
SCG5-209ENST00000498607 CHMP7Q8WUX9 453 aaPredicted RBP18.87■□□□□ 0.61
SCG5-209ENST00000498607 FBLN2P98095 1184 aa18.82■□□□□ 0.6
SCG5-209ENST00000498607 NUP160Q12769 1436 aa18.82■□□□□ 0.6
SCG5-209ENST00000498607 CEP170Q5SW79 1584 aa18.81■□□□□ 0.6
SCG5-209ENST00000498607 IQGAP2Q13576 1575 aa18.77■□□□□ 0.6
SCG5-209ENST00000498607 NCBP3Q53F19 620 aaKnown RBP18.77■□□□□ 0.6
SCG5-209ENST00000498607 KIAA0586Q9BVV6 1533 aa18.77■□□□□ 0.6
SCG5-209ENST00000498607 CEP162Q5TB80 1403 aa18.76■□□□□ 0.59
SCG5-209ENST00000498607 CLIP1P30622 1438 aa18.71■□□□□ 0.59
SCG5-209ENST00000498607 CLASP1Q7Z460 1538 aa18.69■□□□□ 0.58
SCG5-209ENST00000498607 UGGT2Q9NYU1 1516 aa18.69■□□□□ 0.58
SCG5-209ENST00000498607 EFCAB5A4FU69 1503 aa18.68■□□□□ 0.58
SCG5-209ENST00000498607 MSH5O43196 834 aa18.67■□□□□ 0.58
SCG5-209ENST00000498607 SAMD9Q5K651 1589 aa18.65■□□□□ 0.58
SCG5-209ENST00000498607 ARHGAP35Q9NRY4 1499 aa18.65■□□□□ 0.58
SCG5-209ENST00000498607 SHROOM2Q13796 1616 aa18.63■□□□□ 0.57
SCG5-209ENST00000498607 RANGAP1P46060 587 aaPredicted RBP18.62■□□□□ 0.57
SCG5-209ENST00000498607 OSCARQ8IYS5 282 aa18.59■□□□□ 0.57
SCG5-209ENST00000498607 JPH4Q96JJ6 628 aa18.58■□□□□ 0.56
SCG5-209ENST00000498607 KIAA0556O60303 1618 aa18.58■□□□□ 0.56
SCG5-209ENST00000498607 ARAP1Q96P48 1450 aa18.58■□□□□ 0.56
SCG5-209ENST00000498607 DISP1Q96F81 1524 aa18.57■□□□□ 0.56
SCG5-209ENST00000498607 CARMIL2Q6F5E8 1435 aa18.54■□□□□ 0.56
SCG5-209ENST00000498607 FHOD3Q2V2M9 1422 aa18.53■□□□□ 0.56
SCG5-209ENST00000498607 PRG4Q92954 1404 aaPredicted RBP18.53■□□□□ 0.56
SCG5-209ENST00000498607 SLC4A1APQ9BWU0 796 aaKnown RBP18.52■□□□□ 0.56
SCG5-209ENST00000498607 VPS8Q8N3P4 1428 aa18.5■□□□□ 0.55
SCG5-209ENST00000498607 NPM3O75607 178 aaKnown RBP18.5■□□□□ 0.55
SCG5-209ENST00000498607 SCAF1Q9H7N4 1312 aaKnown RBP18.49■□□□□ 0.55
SCG5-209ENST00000498607 P3H3Q8IVL6 736 aa18.49■□□□□ 0.55
SCG5-209ENST00000498607 FMN1Q68DA7 1419 aa18.47■□□□□ 0.55
SCG5-209ENST00000498607 ERCC6L2Q5T890 1561 aa18.46■□□□□ 0.55
SCG5-209ENST00000498607 CNKSR2Q8WXI2 1034 aa18.43■□□□□ 0.54
SCG5-209ENST00000498607 PCF11O94913 1555 aaKnown RBP18.42■□□□□ 0.54
SCG5-209ENST00000498607 FYCO1Q9BQS8 1478 aa18.39■□□□□ 0.54
SCG5-209ENST00000498607 CASKIN1Q8WXD9 1431 aa18.39■□□□□ 0.53
SCG5-209ENST00000498607 PTPRGP23470 1445 aa18.37■□□□□ 0.53
SCG5-209ENST00000498607 RAPGEF6Q8TEU7 1601 aa18.36■□□□□ 0.53
SCG5-209ENST00000498607 HECW1Q76N89 1606 aa18.35■□□□□ 0.53
SCG5-209ENST00000498607 ABCA8O94911 1581 aa18.34■□□□□ 0.53
SCG5-209ENST00000498607 ARHGEF11O15085 1522 aa18.34■□□□□ 0.53
SCG5-209ENST00000498607 PLB1Q6P1J6 1458 aa18.32■□□□□ 0.52
SCG5-209ENST00000498607 TTBK1Q5TCY1 1321 aaPredicted RBP18.31■□□□□ 0.52
SCG5-209ENST00000498607 CFAP43Q8NDM7 1665 aa18.3■□□□□ 0.52
SCG5-209ENST00000498607 LRRIQ1Q96JM4 1722 aa18.29■□□□□ 0.52
SCG5-209ENST00000498607 RIMBP3CA6NJZ7 1639 aa18.29■□□□□ 0.52
SCG5-209ENST00000498607 RIMBP3BA6NNM3 1639 aa18.29■□□□□ 0.52
SCG5-209ENST00000498607 RIMBP3Q9UFD9 1639 aa18.29■□□□□ 0.52
SCG5-209ENST00000498607 MAP3K1Q13233 1512 aa18.28■□□□□ 0.52
SCG5-209ENST00000498607 NUP153P49790 1475 aaKnown RBP18.27■□□□□ 0.52
SCG5-209ENST00000498607 TIAM1Q13009 1591 aa18.27■□□□□ 0.52
SCG5-209ENST00000498607 UACAQ9BZF9 1416 aa18.27■□□□□ 0.52
SCG5-209ENST00000498607 ABCC2Q92887 1545 aa18.27■□□□□ 0.51
SCG5-209ENST00000498607 CCDC18Q5T9S5 1454 aa18.26■□□□□ 0.51
SCG5-209ENST00000498607 EPRSP07814 1512 aaKnown RBP18.25■□□□□ 0.51
SCG5-209ENST00000498607 APLP2Q06481 763 aa18.25■□□□□ 0.51
SCG5-209ENST00000498607 UHRF1BP1LA0JNW5 1464 aa18.25■□□□□ 0.51
SCG5-209ENST00000498607 ATP1B4Q9UN42 357 aaPredicted RBP18.24■□□□□ 0.51
SCG5-209ENST00000498607 CDK13Q14004 1512 aaKnown RBP18.21■□□□□ 0.51
SCG5-209ENST00000498607 ADCY10Q96PN6 1610 aa18.2■□□□□ 0.5
SCG5-209ENST00000498607 ATP10BO94823 1461 aa18.16■□□□□ 0.5
SCG5-209ENST00000498607 KDM5BQ9UGL1 1544 aa18.16■□□□□ 0.5
SCG5-209ENST00000498607 LRRC9Q6ZRR7 1453 aa18.15■□□□□ 0.5
SCG5-209ENST00000498607 ZCCHC11Q5TAX3 1644 aaKnown RBP18.14■□□□□ 0.49
SCG5-209ENST00000498607 EHBP1L1Q8N3D4 1523 aa18.13■□□□□ 0.49
SCG5-209ENST00000498607 ARID3CA6NKF2 412 aa18.12■□□□□ 0.49
SCG5-209ENST00000498607 MAPK8IP2Q13387 824 aaPredicted RBP18.11■□□□□ 0.49
SCG5-209ENST00000498607 KANK4Q5T7N3 995 aaPredicted RBP18.11■□□□□ 0.49
SCG5-209ENST00000498607 MTUS2Q5JR59 1369 aa18.11■□□□□ 0.49
SCG5-209ENST00000498607 MAGI3Q5TCQ9 1506 aa18.11■□□□□ 0.49
SCG5-209ENST00000498607 CDK11AQ9UQ88 783 aaPredicted RBP18.09■□□□□ 0.49
SCG5-209ENST00000498607 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.08■□□□□ 0.48
SCG5-209ENST00000498607 HNRNPUL2Q1KMD3 747 aaKnown RBP18.08■□□□□ 0.48
SCG5-209ENST00000498607 PPARGC1BQ86YN6 1023 aaKnown RBP18.08■□□□□ 0.48
SCG5-209ENST00000498607 TROQ12816 1431 aaPredicted RBP18.07■□□□□ 0.48
SCG5-209ENST00000498607 CYB5RLQ6IPT4 315 aa18.07■□□□□ 0.48
SCG5-209ENST00000498607 SUPT6HQ7KZ85 1726 aaKnown RBP18.06■□□□□ 0.48
SCG5-209ENST00000498607 DNAJC5Q9H3Z4 198 aa18.03■□□□□ 0.48
SCG5-209ENST00000498607 PLEKHD1A6NEE1 506 aa18.02■□□□□ 0.48
SCG5-209ENST00000498607 KIF14Q15058 1648 aa18.01■□□□□ 0.47
SCG5-209ENST00000498607 NCOA2Q15596 1464 aa18.01■□□□□ 0.47
SCG5-209ENST00000498607 NPM1P06748 294 aaKnown RBP eCLIP18■□□□□ 0.47
SCG5-209ENST00000498607 WDR7Q9Y4E6 1490 aa17.99■□□□□ 0.47
SCG5-209ENST00000498607 MAPKBP1O60336 1514 aa17.98■□□□□ 0.47
SCG5-209ENST00000498607 ASXL2Q76L83 1435 aa17.98■□□□□ 0.47
SCG5-209ENST00000498607 ABCC10Q5T3U5 1492 aa17.95■□□□□ 0.46
SCG5-209ENST00000498607 PHLDB1Q86UU1 1377 aa17.94■□□□□ 0.46
SCG5-209ENST00000498607 RNF216Q9NWF9 866 aaPredicted RBP17.94■□□□□ 0.46
SCG5-209ENST00000498607 ITSN2Q9NZM3 1697 aa17.93■□□□□ 0.46
SCG5-209ENST00000498607 MYOM3Q5VTT5 1437 aa17.92■□□□□ 0.46
SCG5-209ENST00000498607 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.91■□□□□ 0.46
SCG5-209ENST00000498607 TTC37Q6PGP7 1564 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms