RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.35■□□□□ 0.69
ERCC8-208ENST00000497892 OSCARQ8IYS5 282 aa19.34■□□□□ 0.69
ERCC8-208ENST00000497892 SYNJ2O15056 1496 aa19.33■□□□□ 0.68
ERCC8-208ENST00000497892 ERICH3Q5RHP9 1530 aa19.32■□□□□ 0.68
ERCC8-208ENST00000497892 ADAMTS12P58397 1594 aa19.31■□□□□ 0.68
ERCC8-208ENST00000497892 FBLN2P98095 1184 aa19.25■□□□□ 0.67
ERCC8-208ENST00000497892 KIF27Q86VH2 1401 aa19.25■□□□□ 0.67
ERCC8-208ENST00000497892 CHMP7Q8WUX9 453 aaPredicted RBP19.22■□□□□ 0.67
ERCC8-208ENST00000497892 FHAD1B1AJZ9 1412 aa19.22■□□□□ 0.67
ERCC8-208ENST00000497892 GRIN2AQ12879 1464 aa19.21■□□□□ 0.67
ERCC8-208ENST00000497892 CLASP1Q7Z460 1538 aa19.2■□□□□ 0.66
ERCC8-208ENST00000497892 CUL7Q14999 1698 aa19.18■□□□□ 0.66
ERCC8-208ENST00000497892 TRIM41Q8WV44 630 aa19.15■□□□□ 0.66
ERCC8-208ENST00000497892 IGF1RP08069 1367 aa19.14■□□□□ 0.65
ERCC8-208ENST00000497892 CEP170Q5SW79 1584 aa19.13■□□□□ 0.65
ERCC8-208ENST00000497892 RIMBP3CA6NJZ7 1639 aa19.12■□□□□ 0.65
ERCC8-208ENST00000497892 RIMBP3BA6NNM3 1639 aa19.12■□□□□ 0.65
ERCC8-208ENST00000497892 RIMBP3Q9UFD9 1639 aa19.12■□□□□ 0.65
ERCC8-208ENST00000497892 ARHGEF11O15085 1522 aa19.12■□□□□ 0.65
ERCC8-208ENST00000497892 NUP160Q12769 1436 aa19.12■□□□□ 0.65
ERCC8-208ENST00000497892 RUSC2Q8N2Y8 1516 aa19.07■□□□□ 0.64
ERCC8-208ENST00000497892 SHROOM2Q13796 1616 aa19.02■□□□□ 0.64
ERCC8-208ENST00000497892 CARMIL1Q5VZK9 1371 aa19.02■□□□□ 0.64
ERCC8-208ENST00000497892 U3KPZ7 1027 aaPredicted RBP18.99■□□□□ 0.63
ERCC8-208ENST00000497892 ARAP1Q96P48 1450 aa18.97■□□□□ 0.63
ERCC8-208ENST00000497892 RAPGEF2Q9Y4G8 1499 aa18.95■□□□□ 0.62
ERCC8-208ENST00000497892 KIAA0586Q9BVV6 1533 aa18.93■□□□□ 0.62
ERCC8-208ENST00000497892 EEA1Q15075 1411 aa18.91■□□□□ 0.62
ERCC8-208ENST00000497892 PRXQ9BXM0 1461 aa18.91■□□□□ 0.62
ERCC8-208ENST00000497892 ERCC6L2Q5T890 1561 aa18.91■□□□□ 0.62
ERCC8-208ENST00000497892 SLC4A2P04920 1241 aa18.88■□□□□ 0.61
ERCC8-208ENST00000497892 IQGAP2Q13576 1575 aa18.86■□□□□ 0.61
ERCC8-208ENST00000497892 PRG4Q92954 1404 aaPredicted RBP18.85■□□□□ 0.61
ERCC8-208ENST00000497892 CTTNBP2Q8WZ74 1663 aa18.85■□□□□ 0.61
ERCC8-208ENST00000497892 CYB5RLQ6IPT4 315 aa18.83■□□□□ 0.6
ERCC8-208ENST00000497892 JPH4Q96JJ6 628 aa18.83■□□□□ 0.6
ERCC8-208ENST00000497892 CSRNP3Q8WYN3 585 aa18.82■□□□□ 0.6
ERCC8-208ENST00000497892 KIF21BO75037 1637 aa18.77■□□□□ 0.6
ERCC8-208ENST00000497892 UGGT2Q9NYU1 1516 aa18.76■□□□□ 0.59
ERCC8-208ENST00000497892 FAM9AQ8IZU1 332 aaPredicted RBP18.72■□□□□ 0.59
ERCC8-208ENST00000497892 DISP1Q96F81 1524 aa18.71■□□□□ 0.59
ERCC8-208ENST00000497892 CARMIL2Q6F5E8 1435 aa18.71■□□□□ 0.59
ERCC8-208ENST00000497892 KIAA0556O60303 1618 aa18.69■□□□□ 0.58
ERCC8-208ENST00000497892 SPINK5Q9NQ38 1064 aaPredicted RBP18.67■□□□□ 0.58
ERCC8-208ENST00000497892 TNIKQ9UKE5 1360 aa18.64■□□□□ 0.57
ERCC8-208ENST00000497892 GOLGA3Q08378 1498 aa18.64■□□□□ 0.57
ERCC8-208ENST00000497892 ADCY10Q96PN6 1610 aa18.62■□□□□ 0.57
ERCC8-208ENST00000497892 PTPRGP23470 1445 aa18.61■□□□□ 0.57
ERCC8-208ENST00000497892 CAPN15O75808 1086 aa18.61■□□□□ 0.57
ERCC8-208ENST00000497892 SAMD9Q5K651 1589 aa18.59■□□□□ 0.57
ERCC8-208ENST00000497892 UHRF1BP1LA0JNW5 1464 aa18.52■□□□□ 0.56
ERCC8-208ENST00000497892 ABCC2Q92887 1545 aa18.52■□□□□ 0.56
ERCC8-208ENST00000497892 UACAQ9BZF9 1416 aa18.51■□□□□ 0.55
ERCC8-208ENST00000497892 EFCAB5A4FU69 1503 aa18.51■□□□□ 0.55
ERCC8-208ENST00000497892 DSG3P32926 999 aa18.51■□□□□ 0.55
ERCC8-208ENST00000497892 TTBK1Q5TCY1 1321 aaPredicted RBP18.5■□□□□ 0.55
ERCC8-208ENST00000497892 MAPKBP1O60336 1514 aa18.5■□□□□ 0.55
ERCC8-208ENST00000497892 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.49■□□□□ 0.55
ERCC8-208ENST00000497892 HNRNPUL2Q1KMD3 747 aaKnown RBP18.49■□□□□ 0.55
ERCC8-208ENST00000497892 ABCA8O94911 1581 aa18.47■□□□□ 0.55
ERCC8-208ENST00000497892 PLB1Q6P1J6 1458 aa18.46■□□□□ 0.55
ERCC8-208ENST00000497892 UBTFP17480 764 aaKnown RBP18.46■□□□□ 0.55
ERCC8-208ENST00000497892 APLP2Q06481 763 aa18.46■□□□□ 0.55
ERCC8-208ENST00000497892 EHMT2Q96KQ7 1210 aa18.45■□□□□ 0.54
ERCC8-208ENST00000497892 KDM5BQ9UGL1 1544 aa18.44■□□□□ 0.54
ERCC8-208ENST00000497892 NPM1P06748 294 aaKnown RBP eCLIP18.43■□□□□ 0.54
ERCC8-208ENST00000497892 TRHP20396 242 aaPredicted RBP18.43■□□□□ 0.54
ERCC8-208ENST00000497892 SLC4A1APQ9BWU0 796 aaKnown RBP18.43■□□□□ 0.54
ERCC8-208ENST00000497892 KIF13AQ9H1H9 1805 aa18.42■□□□□ 0.54
ERCC8-208ENST00000497892 ZCCHC11Q5TAX3 1644 aaKnown RBP18.42■□□□□ 0.54
ERCC8-208ENST00000497892 FHOD3Q2V2M9 1422 aa18.41■□□□□ 0.54
ERCC8-208ENST00000497892 P3H3Q8IVL6 736 aa18.41■□□□□ 0.54
ERCC8-208ENST00000497892 DIP2BQ9P265 1576 aa18.39■□□□□ 0.53
ERCC8-208ENST00000497892 RANGAP1P46060 587 aaPredicted RBP18.39■□□□□ 0.53
ERCC8-208ENST00000497892 SAMD1Q6SPF0 538 aaPredicted RBP18.39■□□□□ 0.53
ERCC8-208ENST00000497892 RAPGEF6Q8TEU7 1601 aa18.38■□□□□ 0.53
ERCC8-208ENST00000497892 ABCC10Q5T3U5 1492 aa18.38■□□□□ 0.53
ERCC8-208ENST00000497892 ARHGAP35Q9NRY4 1499 aa18.38■□□□□ 0.53
ERCC8-208ENST00000497892 ASXL2Q76L83 1435 aa18.35■□□□□ 0.53
ERCC8-208ENST00000497892 ZNF219Q9P2Y4 722 aaPredicted RBP18.34■□□□□ 0.53
ERCC8-208ENST00000497892 MYCNP04198 464 aaPredicted RBP18.3■□□□□ 0.52
ERCC8-208ENST00000497892 NUP153P49790 1475 aaKnown RBP18.3■□□□□ 0.52
ERCC8-208ENST00000497892 WDR7Q9Y4E6 1490 aa18.29■□□□□ 0.52
ERCC8-208ENST00000497892 GLI2P10070 1586 aa18.29■□□□□ 0.52
ERCC8-208ENST00000497892 FMN1Q68DA7 1419 aa18.28■□□□□ 0.52
ERCC8-208ENST00000497892 ATP10BO94823 1461 aa18.27■□□□□ 0.52
ERCC8-208ENST00000497892 FAM69CQ0P6D2 419 aa18.26■□□□□ 0.51
ERCC8-208ENST00000497892 EPRSP07814 1512 aaKnown RBP18.26■□□□□ 0.51
ERCC8-208ENST00000497892 CLIP1P30622 1438 aa18.25■□□□□ 0.51
ERCC8-208ENST00000497892 HECW1Q76N89 1606 aa18.24■□□□□ 0.51
ERCC8-208ENST00000497892 MAP3K4Q9Y6R4 1608 aa18.22■□□□□ 0.51
ERCC8-208ENST00000497892 ARID3CA6NKF2 412 aa18.2■□□□□ 0.5
ERCC8-208ENST00000497892 PCF11O94913 1555 aaKnown RBP18.2■□□□□ 0.5
ERCC8-208ENST00000497892 TSPOAP1O95153 1857 aa18.2■□□□□ 0.5
ERCC8-208ENST00000497892 ABCB7O75027 752 aa18.19■□□□□ 0.5
ERCC8-208ENST00000497892 CEP162Q5TB80 1403 aa18.19■□□□□ 0.5
ERCC8-208ENST00000497892 PPRC1Q5VV67 1664 aaKnown RBP18.18■□□□□ 0.5
ERCC8-208ENST00000497892 FOXD4L1Q9NU39 408 aa18.18■□□□□ 0.5
ERCC8-208ENST00000497892 CFAP43Q8NDM7 1665 aa18.17■□□□□ 0.5
ERCC8-208ENST00000497892 LRRIQ1Q96JM4 1722 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms