RNA–Protein interactions for RNA: ENST00000497663.1

TNRC18-210, Transcript of trinucleotide repeat containing 18, humanhuman

TSL 2

Gene TNRC18, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-210ENST00000497663 CSRNP3Q8WYN3 585 aa27.31■■□□□ 1.96
TNRC18-210ENST00000497663 ARAP1Q96P48 1450 aa27.31■■□□□ 1.96
TNRC18-210ENST00000497663 WDR97A6NE52 1622 aa27.29■■□□□ 1.96
TNRC18-210ENST00000497663 GRIN2BQ13224 1484 aa27.27■■□□□ 1.96
TNRC18-210ENST00000497663 CHMP7Q8WUX9 453 aaPredicted RBP27.25■■□□□ 1.95
TNRC18-210ENST00000497663 MAGI1Q96QZ7 1491 aaPredicted RBP27.23■■□□□ 1.95
TNRC18-210ENST00000497663 CLASP1Q7Z460 1538 aa27.22■■□□□ 1.95
TNRC18-210ENST00000497663 GAPVD1Q14C86 1478 aa27.2■■□□□ 1.95
TNRC18-210ENST00000497663 ABCA10Q8WWZ4 1543 aa27.18■■□□□ 1.94
TNRC18-210ENST00000497663 SYNJ2O15056 1496 aa27.18■■□□□ 1.94
TNRC18-210ENST00000497663 ABCA5Q8WWZ7 1642 aa27.15■■□□□ 1.94
TNRC18-210ENST00000497663 PBRM1Q86U86 1689 aa27.14■■□□□ 1.94
TNRC18-210ENST00000497663 SYNJ1O43426 1573 aa27.11■■□□□ 1.93
TNRC18-210ENST00000497663 WRNQ14191 1432 aaPredicted RBP eCLIP27.06■■□□□ 1.92
TNRC18-210ENST00000497663 TOP2BQ02880 1626 aa27.04■■□□□ 1.92
TNRC18-210ENST00000497663 MYCNP04198 464 aaPredicted RBP27.03■■□□□ 1.92
TNRC18-210ENST00000497663 BIVM-ERCC5R4GMW8 1640 aa27.03■■□□□ 1.92
TNRC18-210ENST00000497663 U3KPZ7 1027 aaPredicted RBP27■■□□□ 1.91
TNRC18-210ENST00000497663 TRHP20396 242 aaPredicted RBP26.99■■□□□ 1.91
TNRC18-210ENST00000497663 GRIN2AQ12879 1464 aa26.95■■□□□ 1.91
TNRC18-210ENST00000497663 ERCC6L2Q5T890 1561 aa26.95■■□□□ 1.9
TNRC18-210ENST00000497663 ADAMTS12P58397 1594 aa26.94■■□□□ 1.9
TNRC18-210ENST00000497663 RNF39Q9H2S5 420 aa26.91■■□□□ 1.9
TNRC18-210ENST00000497663 CEP170Q5SW79 1584 aa26.9■■□□□ 1.9
TNRC18-210ENST00000497663 NUP160Q12769 1436 aa26.87■■□□□ 1.89
TNRC18-210ENST00000497663 FHAD1B1AJZ9 1412 aa26.84■■□□□ 1.89
TNRC18-210ENST00000497663 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.8■■□□□ 1.88
TNRC18-210ENST00000497663 HNRNPUL2Q1KMD3 747 aaKnown RBP26.8■■□□□ 1.88
TNRC18-210ENST00000497663 ERICH3Q5RHP9 1530 aa26.79■■□□□ 1.88
TNRC18-210ENST00000497663 SHROOM2Q13796 1616 aa26.71■■□□□ 1.87
TNRC18-210ENST00000497663 SAMD1Q6SPF0 538 aaPredicted RBP26.69■■□□□ 1.86
TNRC18-210ENST00000497663 C1QBPQ07021 282 aaKnown RBP26.65■■□□□ 1.86
TNRC18-210ENST00000497663 PRG4Q92954 1404 aaPredicted RBP26.63■■□□□ 1.85
TNRC18-210ENST00000497663 JPH4Q96JJ6 628 aa26.61■■□□□ 1.85
TNRC18-210ENST00000497663 IGF1RP08069 1367 aa26.6■■□□□ 1.85
TNRC18-210ENST00000497663 RUSC2Q8N2Y8 1516 aa26.56■■□□□ 1.84
TNRC18-210ENST00000497663 APLP2Q06481 763 aa26.53■■□□□ 1.84
TNRC18-210ENST00000497663 KIF27Q86VH2 1401 aa26.49■■□□□ 1.83
TNRC18-210ENST00000497663 ATXN8OSP0DMR3 200 aa26.48■■□□□ 1.83
TNRC18-210ENST00000497663 KIAA0586Q9BVV6 1533 aa26.4■■□□□ 1.82
TNRC18-210ENST00000497663 CARMIL1Q5VZK9 1371 aa26.37■■□□□ 1.81
TNRC18-210ENST00000497663 CUL7Q14999 1698 aa26.37■■□□□ 1.81
TNRC18-210ENST00000497663 KIF13AQ9H1H9 1805 aa26.32■■□□□ 1.8
TNRC18-210ENST00000497663 ADCY10Q96PN6 1610 aa26.32■■□□□ 1.8
TNRC18-210ENST00000497663 TTBK1Q5TCY1 1321 aaPredicted RBP26.27■■□□□ 1.8
TNRC18-210ENST00000497663 FAM69CQ0P6D2 419 aa26.23■■□□□ 1.79
TNRC18-210ENST00000497663 ABCC10Q5T3U5 1492 aa26.21■■□□□ 1.79
TNRC18-210ENST00000497663 CACNB1Q02641 598 aaPredicted RBP26.2■■□□□ 1.78
TNRC18-210ENST00000497663 SPINK5Q9NQ38 1064 aaPredicted RBP26.2■■□□□ 1.78
TNRC18-210ENST00000497663 ATF5Q9Y2D1 282 aaPredicted RBP26.2■■□□□ 1.78
TNRC18-210ENST00000497663 MAPKBP1O60336 1514 aa26.19■■□□□ 1.78
TNRC18-210ENST00000497663 NPM1P06748 294 aaKnown RBP eCLIP26.19■■□□□ 1.78
TNRC18-210ENST00000497663 PTPRGP23470 1445 aa26.18■■□□□ 1.78
TNRC18-210ENST00000497663 CAPN15O75808 1086 aa26.17■■□□□ 1.78
TNRC18-210ENST00000497663 DIP2BQ9P265 1576 aa26.16■■□□□ 1.78
TNRC18-210ENST00000497663 IQGAP2Q13576 1575 aa26.13■■□□□ 1.77
TNRC18-210ENST00000497663 DISP1Q96F81 1524 aa26.12■■□□□ 1.77
TNRC18-210ENST00000497663 TNIKQ9UKE5 1360 aa26.11■■□□□ 1.77
TNRC18-210ENST00000497663 RAPGEF2Q9Y4G8 1499 aa26.1■■□□□ 1.77
TNRC18-210ENST00000497663 ZNF219Q9P2Y4 722 aaPredicted RBP26.09■■□□□ 1.77
TNRC18-210ENST00000497663 CARMIL2Q6F5E8 1435 aa26.06■■□□□ 1.76
TNRC18-210ENST00000497663 ABCC2Q92887 1545 aa26.02■■□□□ 1.76
TNRC18-210ENST00000497663 UGGT2Q9NYU1 1516 aa25.99■■□□□ 1.75
TNRC18-210ENST00000497663 UACAQ9BZF9 1416 aa25.97■■□□□ 1.75
TNRC18-210ENST00000497663 TSPOAP1O95153 1857 aa25.97■■□□□ 1.75
TNRC18-210ENST00000497663 ASXL2Q76L83 1435 aa25.97■■□□□ 1.75
TNRC18-210ENST00000497663 UHRF1BP1LA0JNW5 1464 aa25.96■■□□□ 1.75
TNRC18-210ENST00000497663 KIAA0556O60303 1618 aa25.93■■□□□ 1.74
TNRC18-210ENST00000497663 PRXQ9BXM0 1461 aa25.89■■□□□ 1.73
TNRC18-210ENST00000497663 KDM6BO15054 1643 aa25.87■■□□□ 1.73
TNRC18-210ENST00000497663 KDM5BQ9UGL1 1544 aa25.87■■□□□ 1.73
TNRC18-210ENST00000497663 PLB1Q6P1J6 1458 aa25.86■■□□□ 1.73
TNRC18-210ENST00000497663 PPRC1Q5VV67 1664 aaKnown RBP25.85■■□□□ 1.73
TNRC18-210ENST00000497663 GLI2P10070 1586 aa25.82■■□□□ 1.72
TNRC18-210ENST00000497663 ZCCHC11Q5TAX3 1644 aaKnown RBP25.81■■□□□ 1.72
TNRC18-210ENST00000497663 CTTNBP2Q8WZ74 1663 aa25.81■■□□□ 1.72
TNRC18-210ENST00000497663 EPRSP07814 1512 aaKnown RBP25.81■■□□□ 1.72
TNRC18-210ENST00000497663 COL17A1Q9UMD9 1497 aaPredicted RBP25.79■■□□□ 1.72
TNRC18-210ENST00000497663 KDM4FA0A1W2PPD8 638 aa25.78■■□□□ 1.72
TNRC18-210ENST00000497663 P3H3Q8IVL6 736 aa25.73■■□□□ 1.71
TNRC18-210ENST00000497663 ABCA8O94911 1581 aa25.72■■□□□ 1.71
TNRC18-210ENST00000497663 MAP3K4Q9Y6R4 1608 aa25.7■■□□□ 1.7
TNRC18-210ENST00000497663 GOLGA3Q08378 1498 aa25.69■■□□□ 1.7
TNRC18-210ENST00000497663 ARID3CA6NKF2 412 aa25.69■■□□□ 1.7
TNRC18-210ENST00000497663 WDR7Q9Y4E6 1490 aa25.67■■□□□ 1.7
TNRC18-210ENST00000497663 ABCB7O75027 752 aa25.65■■□□□ 1.7
TNRC18-210ENST00000497663 DSG3P32926 999 aa25.64■■□□□ 1.7
TNRC18-210ENST00000497663 KCNH8Q96L42 1107 aa25.64■■□□□ 1.7
TNRC18-210ENST00000497663 POLA2Q14181 598 aa25.63■■□□□ 1.69
TNRC18-210ENST00000497663 FAM9AQ8IZU1 332 aaPredicted RBP25.6■■□□□ 1.69
TNRC18-210ENST00000497663 RANGAP1P46060 587 aaPredicted RBP25.57■■□□□ 1.68
TNRC18-210ENST00000497663 ATP10BO94823 1461 aa25.55■■□□□ 1.68
TNRC18-210ENST00000497663 CD109Q6YHK3 1445 aa25.54■■□□□ 1.68
TNRC18-210ENST00000497663 TEX14Q8IWB6 1497 aa25.53■■□□□ 1.68
TNRC18-210ENST00000497663 SAMD9Q5K651 1589 aa25.53■■□□□ 1.68
TNRC18-210ENST00000497663 MAGI3Q5TCQ9 1506 aa25.48■■□□□ 1.67
TNRC18-210ENST00000497663 ADGRL1O94910 1474 aa25.48■■□□□ 1.67
TNRC18-210ENST00000497663 FHOD3Q2V2M9 1422 aa25.46■■□□□ 1.67
TNRC18-210ENST00000497663 CFAP43Q8NDM7 1665 aa25.44■■□□□ 1.66
TNRC18-210ENST00000497663 EEA1Q15075 1411 aa25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms