RNA–Protein interactions for RNA: ENST00000495511.1

PDE1A-209, Transcript of phosphodiesterase 1A, humanhuman

TSL 4

Gene PDE1A, Length 565 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1A-209ENST00000495511 ABCC8Q09428 1581 aa10.89□□□□□ -0.67
PDE1A-209ENST00000495511 TOPBP1Q92547 1522 aa10.89□□□□□ -0.67
PDE1A-209ENST00000495511 SP7Q8TDD2 431 aaPredicted RBP10.88□□□□□ -0.67
PDE1A-209ENST00000495511 SUPT5HO00267 1087 aaKnown RBP10.86□□□□□ -0.67
PDE1A-209ENST00000495511 FBLN2P98095 1184 aa10.86□□□□□ -0.67
PDE1A-209ENST00000495511 AQRO60306 1485 aaKnown RBP eCLIP10.86□□□□□ -0.67
PDE1A-209ENST00000495511 SOGA1O94964 1423 aa10.83□□□□□ -0.68
PDE1A-209ENST00000495511 TDRD9Q8NDG6 1382 aaKnown RBP10.82□□□□□ -0.68
PDE1A-209ENST00000495511 CYB5RLQ6IPT4 315 aa10.8□□□□□ -0.68
PDE1A-209ENST00000495511 DNMBPQ6XZF7 1577 aa10.8□□□□□ -0.68
PDE1A-209ENST00000495511 RAD54L2Q9Y4B4 1467 aa10.8□□□□□ -0.68
PDE1A-209ENST00000495511 POLA1P09884 1462 aaPredicted RBP10.79□□□□□ -0.68
PDE1A-209ENST00000495511 CHMP7Q8WUX9 453 aaPredicted RBP10.77□□□□□ -0.69
PDE1A-209ENST00000495511 TARBP1Q13395 1621 aaKnown RBP10.75□□□□□ -0.69
PDE1A-209ENST00000495511 PRDM2Q13029 1718 aa10.74□□□□□ -0.69
PDE1A-209ENST00000495511 CUX1P39880 1505 aa10.71□□□□□ -0.69
PDE1A-209ENST00000495511 FGD5Q6ZNL6 1462 aa10.71□□□□□ -0.69
PDE1A-209ENST00000495511 ARHGEF11O15085 1522 aa10.7□□□□□ -0.7
PDE1A-209ENST00000495511 EIF4G3O43432 1585 aaKnown RBP10.69□□□□□ -0.7
PDE1A-209ENST00000495511 MKRN4PQ13434 485 aaPredicted RBP10.69□□□□□ -0.7
PDE1A-209ENST00000495511 RIMBP3CA6NJZ7 1639 aa10.69□□□□□ -0.7
PDE1A-209ENST00000495511 RIMBP3BA6NNM3 1639 aa10.69□□□□□ -0.7
PDE1A-209ENST00000495511 RIMBP3Q9UFD9 1639 aa10.69□□□□□ -0.7
PDE1A-209ENST00000495511 AKT1S1Q96B36 256 aa10.67□□□□□ -0.7
PDE1A-209ENST00000495511 GRIN2BQ13224 1484 aa10.67□□□□□ -0.7
PDE1A-209ENST00000495511 SPDYE2BA6NHP3 402 aa10.66□□□□□ -0.7
PDE1A-209ENST00000495511 SPDYE6P0CI01 402 aa10.66□□□□□ -0.7
PDE1A-209ENST00000495511 SPDYE2Q495Y8 402 aa10.66□□□□□ -0.7
PDE1A-209ENST00000495511 CHRDL2Q6WN34 429 aa10.65□□□□□ -0.7
PDE1A-209ENST00000495511 SNAPC4Q5SXM2 1469 aa10.65□□□□□ -0.7
PDE1A-209ENST00000495511 GAPVD1Q14C86 1478 aa10.64□□□□□ -0.71
PDE1A-209ENST00000495511 MAGI1Q96QZ7 1491 aaPredicted RBP10.62□□□□□ -0.71
PDE1A-209ENST00000495511 WRNQ14191 1432 aaPredicted RBP eCLIP10.62□□□□□ -0.71
PDE1A-209ENST00000495511 ARAP1Q96P48 1450 aa10.61□□□□□ -0.71
PDE1A-209ENST00000495511 SYNJ2O15056 1496 aa10.61□□□□□ -0.71
PDE1A-209ENST00000495511 ABCA10Q8WWZ4 1543 aa10.6□□□□□ -0.71
PDE1A-209ENST00000495511 PLSCR2Q9NRY7 297 aa10.6□□□□□ -0.71
PDE1A-209ENST00000495511 WDR97A6NE52 1622 aa10.58□□□□□ -0.72
PDE1A-209ENST00000495511 CHD1O14646 1710 aa10.57□□□□□ -0.72
PDE1A-209ENST00000495511 ZNF692Q9BU19 519 aaPredicted RBP10.56□□□□□ -0.72
PDE1A-209ENST00000495511 CLASP1Q7Z460 1538 aa10.55□□□□□ -0.72
PDE1A-209ENST00000495511 SYNJ1O43426 1573 aa10.53□□□□□ -0.72
PDE1A-209ENST00000495511 JPH4Q96JJ6 628 aa10.53□□□□□ -0.72
PDE1A-209ENST00000495511 REM2Q8IYK8 340 aaPredicted RBP10.52□□□□□ -0.73
PDE1A-209ENST00000495511 FHAD1B1AJZ9 1412 aa10.51□□□□□ -0.73
PDE1A-209ENST00000495511 FKBP8Q14318 412 aa10.51□□□□□ -0.73
PDE1A-209ENST00000495511 SSUH2Q9Y2M2 353 aa10.51□□□□□ -0.73
PDE1A-209ENST00000495511 TOP2BQ02880 1626 aa10.5□□□□□ -0.73
PDE1A-209ENST00000495511 GRIN2AQ12879 1464 aa10.49□□□□□ -0.73
PDE1A-209ENST00000495511 NUP160Q12769 1436 aa10.49□□□□□ -0.73
PDE1A-209ENST00000495511 ABCA5Q8WWZ7 1642 aa10.48□□□□□ -0.73
PDE1A-209ENST00000495511 IGF1RP08069 1367 aa10.48□□□□□ -0.73
PDE1A-209ENST00000495511 BIVM-ERCC5R4GMW8 1640 aa10.44□□□□□ -0.74
PDE1A-209ENST00000495511 ERICH3Q5RHP9 1530 aa10.44□□□□□ -0.74
PDE1A-209ENST00000495511 PRG4Q92954 1404 aaPredicted RBP10.43□□□□□ -0.74
PDE1A-209ENST00000495511 ERCC6L2Q5T890 1561 aa10.43□□□□□ -0.74
PDE1A-209ENST00000495511 PBRM1Q86U86 1689 aa10.42□□□□□ -0.74
PDE1A-209ENST00000495511 SPDYE4A6NLX3 237 aa10.42□□□□□ -0.74
PDE1A-209ENST00000495511 CEP170Q5SW79 1584 aa10.41□□□□□ -0.74
PDE1A-209ENST00000495511 PITPNM1O00562 1244 aa10.41□□□□□ -0.74
PDE1A-209ENST00000495511 SPDYE1Q8NFV5 336 aaPredicted RBP10.41□□□□□ -0.74
PDE1A-209ENST00000495511 ADAMTS12P58397 1594 aa10.39□□□□□ -0.75
PDE1A-209ENST00000495511 NPM1P06748 294 aaKnown RBP eCLIP10.39□□□□□ -0.75
PDE1A-209ENST00000495511 KIF27Q86VH2 1401 aa10.39□□□□□ -0.75
PDE1A-209ENST00000495511 CARMIL1Q5VZK9 1371 aa10.38□□□□□ -0.75
PDE1A-209ENST00000495511 KIAA0586Q9BVV6 1533 aa10.35□□□□□ -0.75
PDE1A-209ENST00000495511 FAM69CQ0P6D2 419 aa10.35□□□□□ -0.75
PDE1A-209ENST00000495511 CLEC11AQ9Y240 323 aa10.34□□□□□ -0.75
PDE1A-209ENST00000495511 SHROOM2Q13796 1616 aa10.33□□□□□ -0.76
PDE1A-209ENST00000495511 HAX1O00165 279 aa10.31□□□□□ -0.76
PDE1A-209ENST00000495511 PTPRGP23470 1445 aa10.31□□□□□ -0.76
PDE1A-209ENST00000495511 TTBK1Q5TCY1 1321 aaPredicted RBP10.31□□□□□ -0.76
PDE1A-209ENST00000495511 PROM2Q8N271 834 aa10.28□□□□□ -0.76
PDE1A-209ENST00000495511 PIP4P2Q8N4L2 257 aa10.27□□□□□ -0.77
PDE1A-209ENST00000495511 FXR2P51116 673 aaKnown RBP eCLIP10.26□□□□□ -0.77
PDE1A-209ENST00000495511 TNIKQ9UKE5 1360 aa10.26□□□□□ -0.77
PDE1A-209ENST00000495511 ABCC10Q5T3U5 1492 aa10.25□□□□□ -0.77
PDE1A-209ENST00000495511 STAG3Q9UJ98 1225 aa10.25□□□□□ -0.77
PDE1A-209ENST00000495511 CARMIL2Q6F5E8 1435 aa10.24□□□□□ -0.77
PDE1A-209ENST00000495511 RUSC2Q8N2Y8 1516 aa10.24□□□□□ -0.77
PDE1A-209ENST00000495511 PRR29P0C7W0 189 aa10.24□□□□□ -0.77
PDE1A-209ENST00000495511 RAPGEF2Q9Y4G8 1499 aa10.21□□□□□ -0.78
PDE1A-209ENST00000495511 CUL7Q14999 1698 aa10.2□□□□□ -0.78
PDE1A-209ENST00000495511 LHX8Q68G74 356 aa10.2□□□□□ -0.78
PDE1A-209ENST00000495511 ADCY10Q96PN6 1610 aa10.18□□□□□ -0.78
PDE1A-209ENST00000495511 MAPKBP1O60336 1514 aa10.18□□□□□ -0.78
PDE1A-209ENST00000495511 UACAQ9BZF9 1416 aa10.18□□□□□ -0.78
PDE1A-209ENST00000495511 DISP1Q96F81 1524 aa10.17□□□□□ -0.78
PDE1A-209ENST00000495511 ASXL2Q76L83 1435 aa10.16□□□□□ -0.78
PDE1A-209ENST00000495511 PRKAR2AP13861 404 aaKnown RBP10.16□□□□□ -0.78
PDE1A-209ENST00000495511 ABCC2Q92887 1545 aa10.16□□□□□ -0.78
PDE1A-209ENST00000495511 UHRF1BP1LA0JNW5 1464 aa10.16□□□□□ -0.78
PDE1A-209ENST00000495511 KDM4FA0A1W2PPD8 638 aa10.15□□□□□ -0.78
PDE1A-209ENST00000495511 IQGAP2Q13576 1575 aa10.14□□□□□ -0.79
PDE1A-209ENST00000495511 PLB1Q6P1J6 1458 aa10.14□□□□□ -0.79
PDE1A-209ENST00000495511 UGGT2Q9NYU1 1516 aa10.13□□□□□ -0.79
PDE1A-209ENST00000495511 EVX2Q03828 476 aa10.13□□□□□ -0.79
PDE1A-209ENST00000495511 P3H3Q8IVL6 736 aa10.13□□□□□ -0.79
PDE1A-209ENST00000495511 KCNH8Q96L42 1107 aa10.13□□□□□ -0.79
PDE1A-209ENST00000495511 KIF13AQ9H1H9 1805 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms