RNA–Protein interactions for RNA: ENST00000495265.5

BRD9-212, Transcript of bromodomain containing 9, humanhuman

TSL 2

Gene BRD9, Length 2,843 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-212ENST00000495265 PPP1R15AO75807 674 aaPredicted RBP25.12■■□□□ 1.61
BRD9-212ENST00000495265 NEFLP07196 543 aa25.12■■□□□ 1.61
BRD9-212ENST00000495265 TRIM52Q96A61 297 aa25.1■■□□□ 1.61
BRD9-212ENST00000495265 KIF27Q86VH2 1401 aa25.1■■□□□ 1.61
BRD9-212ENST00000495265 SETD5Q9C0A6 1442 aa25.09■■□□□ 1.61
BRD9-212ENST00000495265 HIRIP3Q9BW71 556 aaPredicted RBP25.09■■□□□ 1.61
BRD9-212ENST00000495265 CUX1P39880 1505 aa25.08■■□□□ 1.61
BRD9-212ENST00000495265 TIAM1Q13009 1591 aa25■■□□□ 1.59
BRD9-212ENST00000495265 CCER2I3L3R5 266 aa24.99■■□□□ 1.59
BRD9-212ENST00000495265 FAM50AQ14320 339 aaKnown RBP24.98■■□□□ 1.59
BRD9-212ENST00000495265 PHLDB1Q86UU1 1377 aa24.98■■□□□ 1.59
BRD9-212ENST00000495265 ANP32CO43423 234 aa24.97■■□□□ 1.59
BRD9-212ENST00000495265 MSH5O43196 834 aa24.92■■□□□ 1.58
BRD9-212ENST00000495265 LRRC9Q6ZRR7 1453 aa24.92■■□□□ 1.58
BRD9-212ENST00000495265 PRDM2Q13029 1718 aa24.92■■□□□ 1.58
BRD9-212ENST00000495265 MAP3K1Q13233 1512 aa24.9■■□□□ 1.58
BRD9-212ENST00000495265 CFTRP13569 1480 aa24.89■■□□□ 1.58
BRD9-212ENST00000495265 TIMELESSQ9UNS1 1208 aa24.89■■□□□ 1.57
BRD9-212ENST00000495265 IGF1RP08069 1367 aa24.81■■□□□ 1.56
BRD9-212ENST00000495265 IRX6P78412 446 aaPredicted RBP24.77■■□□□ 1.56
BRD9-212ENST00000495265 ATP1B4Q9UN42 357 aaPredicted RBP24.76■■□□□ 1.55
BRD9-212ENST00000495265 P3H3Q8IVL6 736 aa24.75■■□□□ 1.55
BRD9-212ENST00000495265 CADPSQ9ULU8 1353 aa24.73■■□□□ 1.55
BRD9-212ENST00000495265 CARMIL1Q5VZK9 1371 aa24.72■■□□□ 1.55
BRD9-212ENST00000495265 TONSLQ96HA7 1378 aa24.72■■□□□ 1.55
BRD9-212ENST00000495265 CFAP43Q8NDM7 1665 aa24.71■■□□□ 1.55
BRD9-212ENST00000495265 HNRNPUQ00839 825 aaKnown RBP eCLIP24.71■■□□□ 1.55
BRD9-212ENST00000495265 FANCIQ9NVI1 1328 aa24.71■■□□□ 1.55
BRD9-212ENST00000495265 PCF11O94913 1555 aaKnown RBP24.71■■□□□ 1.55
BRD9-212ENST00000495265 FHAD1B1AJZ9 1412 aa24.69■■□□□ 1.54
BRD9-212ENST00000495265 CDK11AQ9UQ88 783 aaPredicted RBP24.69■■□□□ 1.54
BRD9-212ENST00000495265 ERICH6Q7L0X2 663 aa24.62■■□□□ 1.53
BRD9-212ENST00000495265 FHOD3Q2V2M9 1422 aa24.58■■□□□ 1.53
BRD9-212ENST00000495265 CCDC18Q5T9S5 1454 aa24.58■■□□□ 1.53
BRD9-212ENST00000495265 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.57■■□□□ 1.522e-9■■□□□ 11.7
BRD9-212ENST00000495265 LAMC3Q9Y6N6 1575 aa24.56■■□□□ 1.52
BRD9-212ENST00000495265 FGD5Q6ZNL6 1462 aa24.52■■□□□ 1.52
BRD9-212ENST00000495265 FGD6Q6ZV73 1430 aa24.52■■□□□ 1.52
BRD9-212ENST00000495265 UACAQ9BZF9 1416 aa24.52■■□□□ 1.52
BRD9-212ENST00000495265 PTPRKQ15262 1439 aa24.52■■□□□ 1.52
BRD9-212ENST00000495265 FYCO1Q9BQS8 1478 aa24.51■■□□□ 1.51
BRD9-212ENST00000495265 NESP48681 1621 aa24.49■■□□□ 1.51
BRD9-212ENST00000495265 WASHC2AQ641Q2 1341 aa24.49■■□□□ 1.51
BRD9-212ENST00000495265 KDM5BQ9UGL1 1544 aa24.49■■□□□ 1.51
BRD9-212ENST00000495265 FANCD2Q9BXW9 1451 aa24.49■■□□□ 1.51
BRD9-212ENST00000495265 PPP4R2Q9NY27 417 aa24.48■■□□□ 1.51
BRD9-212ENST00000495265 HFM1A2PYH4 1435 aa24.48■■□□□ 1.51
BRD9-212ENST00000495265 CASKIN1Q8WXD9 1431 aa24.48■■□□□ 1.51
BRD9-212ENST00000495265 CCDC184Q52MB2 194 aa24.47■■□□□ 1.51
BRD9-212ENST00000495265 PTPN23Q9H3S7 1636 aa24.46■■□□□ 1.51
BRD9-212ENST00000495265 AQRO60306 1485 aaKnown RBP eCLIP24.45■■□□□ 1.514e-7■■■■■ 37.4
BRD9-212ENST00000495265 HSPA5P11021 654 aaKnown RBP24.45■■□□□ 1.51
BRD9-212ENST00000495265 DNAJC5BQ9UF47 199 aa24.45■■□□□ 1.5
BRD9-212ENST00000495265 ERICH6BQ5W0A0 696 aa24.44■■□□□ 1.5
BRD9-212ENST00000495265 B4GALNT3Q6L9W6 998 aa24.41■■□□□ 1.5
BRD9-212ENST00000495265 NAIPQ13075 1403 aa24.41■■□□□ 1.5
BRD9-212ENST00000495265 MTUS2Q5JR59 1369 aa24.37■■□□□ 1.49
BRD9-212ENST00000495265 EFCAB5A4FU69 1503 aa24.37■■□□□ 1.49
BRD9-212ENST00000495265 FAM9BQ8IZU0 186 aa24.36■■□□□ 1.49
BRD9-212ENST00000495265 DNMBPQ6XZF7 1577 aa24.34■■□□□ 1.49
BRD9-212ENST00000495265 DEKP35659 375 aaKnown RBP24.34■■□□□ 1.49
BRD9-212ENST00000495265 CNTLNQ9NXG0 1405 aa24.33■■□□□ 1.49
BRD9-212ENST00000495265 NCOA2Q15596 1464 aa24.32■■□□□ 1.48
BRD9-212ENST00000495265 EIF4G2P78344 907 aaKnown RBP eCLIP24.32■■□□□ 1.484e-8■■■■■ 75.7
BRD9-212ENST00000495265 FMN1Q68DA7 1419 aa24.31■■□□□ 1.48
BRD9-212ENST00000495265 SNAPC4Q5SXM2 1469 aa24.3■■□□□ 1.48
BRD9-212ENST00000495265 MYT1LQ9UL68 1186 aa24.3■■□□□ 1.48
BRD9-212ENST00000495265 C11orf95C9JLR9 678 aaPredicted RBP24.3■■□□□ 1.48
BRD9-212ENST00000495265 PDS5BQ9NTI5 1447 aa24.29■■□□□ 1.48
BRD9-212ENST00000495265 PRKRIP1Q9H875 184 aaPredicted RBP24.29■■□□□ 1.48
BRD9-212ENST00000495265 KIF21AQ7Z4S6 1674 aa24.29■■□□□ 1.48
BRD9-212ENST00000495265 MRS2Q9HD23 443 aa24.28■■□□□ 1.48
BRD9-212ENST00000495265 RRP7BPQ9NSQ0 103 aa24.28■■□□□ 1.48
BRD9-212ENST00000495265 MYOM3Q5VTT5 1437 aa24.27■■□□□ 1.48
BRD9-212ENST00000495265 RAD54L2Q9Y4B4 1467 aa24.26■■□□□ 1.47
BRD9-212ENST00000495265 ZBED9Q6R2W3 1325 aa24.26■■□□□ 1.47
BRD9-212ENST00000495265 TOPBP1Q92547 1522 aa24.26■■□□□ 1.47
BRD9-212ENST00000495265 DENND4BO75064 1496 aaPredicted RBP24.25■■□□□ 1.47
BRD9-212ENST00000495265 CHIC2Q9UKJ5 165 aa24.24■■□□□ 1.47
BRD9-212ENST00000495265 NOP58Q9Y2X3 529 aaKnown RBP24.23■■□□□ 1.47
BRD9-212ENST00000495265 CTTNBP2Q8WZ74 1663 aa24.22■■□□□ 1.47
BRD9-212ENST00000495265 CCDC7Q96M83 1385 aa24.22■■□□□ 1.47
BRD9-212ENST00000495265 PAK3O75914 559 aaPredicted RBP24.22■■□□□ 1.47
BRD9-212ENST00000495265 LRRIQ1Q96JM4 1722 aa24.22■■□□□ 1.47
BRD9-212ENST00000495265 NBR1Q14596 966 aa24.21■■□□□ 1.47
BRD9-212ENST00000495265 URB2Q14146 1524 aaKnown RBP24.2■■□□□ 1.46
BRD9-212ENST00000495265 NCOA1Q15788 1441 aa24.19■■□□□ 1.46
BRD9-212ENST00000495265 L3MBTL2Q969R5 705 aa24.19■■□□□ 1.46
BRD9-212ENST00000495265 ABCA10Q8WWZ4 1543 aa24.16■■□□□ 1.46
BRD9-212ENST00000495265 FOXD1Q16676 465 aa24.15■■□□□ 1.46
BRD9-212ENST00000495265 SUPT6HQ7KZ85 1726 aaKnown RBP24.15■■□□□ 1.46
BRD9-212ENST00000495265 POLA1P09884 1462 aaPredicted RBP24.15■■□□□ 1.46
BRD9-212ENST00000495265 KDM6BO15054 1643 aa24.14■■□□□ 1.45
BRD9-212ENST00000495265 HECW1Q76N89 1606 aa24.14■■□□□ 1.45
BRD9-212ENST00000495265 CUL7Q14999 1698 aa24.12■■□□□ 1.45
BRD9-212ENST00000495265 GRIN2BQ13224 1484 aa24.12■■□□□ 1.45
BRD9-212ENST00000495265 MPHOSPH9Q99550 1183 aa24.12■■□□□ 1.45
BRD9-212ENST00000495265 AKNAQ7Z591 1439 aa24.11■■□□□ 1.45
BRD9-212ENST00000495265 EHBP1L1Q8N3D4 1523 aa24.09■■□□□ 1.45
BRD9-212ENST00000495265 NBPF8Q3BBV2 869 aa24.09■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms