RNA–Protein interactions for RNA: ENST00000495265.5

BRD9-212, Transcript of bromodomain containing 9, humanhuman

TSL 2

Gene BRD9, Length 2,843 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-212ENST00000495265 NISCHQ9Y2I1 1504 aa34.58■■■■□ 3.13
BRD9-212ENST00000495265 SHROOM4Q9ULL8 1493 aa30.32■■■□□ 2.44
BRD9-212ENST00000495265 SUPT5HO00267 1087 aaKnown RBP30.05■■■□□ 2.4
BRD9-212ENST00000495265 HRCP23327 699 aa29.79■■■□□ 2.36
BRD9-212ENST00000495265 CCDC180Q9P1Z9 1646 aa29.71■■■□□ 2.35
BRD9-212ENST00000495265 MYO15BQ96JP2 1530 aa29.6■■■□□ 2.33
BRD9-212ENST00000495265 CHIC1Q5VXU3 224 aa29.46■■■□□ 2.31
BRD9-212ENST00000495265 PCGF6Q9BYE7 350 aa29.38■■■□□ 2.29
BRD9-212ENST00000495265 ZCCHC6Q5VYS8 1495 aaKnown RBP29.38■■■□□ 2.29
BRD9-212ENST00000495265 PPARGC1BQ86YN6 1023 aaKnown RBP29.23■■■□□ 2.27
BRD9-212ENST00000495265 DCAF1Q9Y4B6 1507 aa28.83■■■□□ 2.21
BRD9-212ENST00000495265 DCAF8L2P0C7V8 631 aa28.78■■■□□ 2.2
BRD9-212ENST00000495265 LOC105371045A0A1W2PR82 267 aa28.75■■■□□ 2.19
BRD9-212ENST00000495265 TRIM26Q12899 539 aaPredicted RBP28.51■■■□□ 2.16
BRD9-212ENST00000495265 ZEB1P37275 1124 aaPredicted RBP28.12■■■□□ 2.09
BRD9-212ENST00000495265 PELP1Q8IZL8 1130 aaKnown RBP28.07■■■□□ 2.08
BRD9-212ENST00000495265 SCAF1Q9H7N4 1312 aaKnown RBP27.99■■■□□ 2.07
BRD9-212ENST00000495265 ABCC9O60706 1549 aa27.86■■■□□ 2.05
BRD9-212ENST00000495265 TRIM41Q8WV44 630 aa27.82■■■□□ 2.04
BRD9-212ENST00000495265 FAM9AQ8IZU1 332 aaPredicted RBP27.79■■■□□ 2.04
BRD9-212ENST00000495265 RSF1Q96T23 1441 aaPredicted RBP27.71■■■□□ 2.03
BRD9-212ENST00000495265 EHMT2Q96KQ7 1210 aa27.66■■■□□ 2.02
BRD9-212ENST00000495265 RB1CC1Q8TDY2 1594 aa27.57■■■□□ 2
BRD9-212ENST00000495265 NACADO15069 1562 aa27.57■■■□□ 2
BRD9-212ENST00000495265 SCRIBQ14160 1630 aa27.48■■□□□ 1.99
BRD9-212ENST00000495265 ACIN1Q9UKV3 1341 aaKnown RBP27.4■■□□□ 1.98
BRD9-212ENST00000495265 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.37■■□□□ 1.97
BRD9-212ENST00000495265 NEUROD1Q13562 356 aa27.36■■□□□ 1.97
BRD9-212ENST00000495265 CCER1Q8TC90 406 aaPredicted RBP27.28■■□□□ 1.96
BRD9-212ENST00000495265 GTF3C3Q9Y5Q9 886 aa27.16■■□□□ 1.94
BRD9-212ENST00000495265 DIEXFQ68CQ4 756 aaKnown RBP27.14■■□□□ 1.94
BRD9-212ENST00000495265 CECR2Q9BXF3 1484 aa27.07■■□□□ 1.92
BRD9-212ENST00000495265 CENPBP07199 599 aaPredicted RBP27.07■■□□□ 1.92
BRD9-212ENST00000495265 MROH2BQ7Z745 1585 aa27.01■■□□□ 1.91
BRD9-212ENST00000495265 TTBK1Q5TCY1 1321 aaPredicted RBP26.94■■□□□ 1.9
BRD9-212ENST00000495265 WIZO95785 1651 aa26.92■■□□□ 1.9
BRD9-212ENST00000495265 UNC13AQ9UPW8 1703 aa26.85■■□□□ 1.89
BRD9-212ENST00000495265 MYT1Q01538 1121 aa26.82■■□□□ 1.88
BRD9-212ENST00000495265 EIF4G1Q04637 1599 aaKnown RBP26.77■■□□□ 1.88
BRD9-212ENST00000495265 WRNQ14191 1432 aaPredicted RBP eCLIP26.77■■□□□ 1.887e-9■■□□□ 11.4
BRD9-212ENST00000495265 ZNF316A6NFI3 1004 aaPredicted RBP26.71■■□□□ 1.87
BRD9-212ENST00000495265 CEP162Q5TB80 1403 aa26.7■■□□□ 1.86
BRD9-212ENST00000495265 BAZ1AQ9NRL2 1556 aaPredicted RBP26.69■■□□□ 1.86
BRD9-212ENST00000495265 YTHDC1Q96MU7 727 aaKnown RBP26.67■■□□□ 1.86
BRD9-212ENST00000495265 CCDC88BA6NC98 1476 aa26.64■■□□□ 1.85
BRD9-212ENST00000495265 ABCC8Q09428 1581 aa26.63■■□□□ 1.85
BRD9-212ENST00000495265 TNIKQ9UKE5 1360 aa26.53■■□□□ 1.84
BRD9-212ENST00000495265 SOGA1O94964 1423 aa26.53■■□□□ 1.84
BRD9-212ENST00000495265 MIER1Q8N108 512 aa26.51■■□□□ 1.83
BRD9-212ENST00000495265 BICRAQ9NZM4 1560 aa26.5■■□□□ 1.83
BRD9-212ENST00000495265 UBTFP17480 764 aaKnown RBP26.43■■□□□ 1.82
BRD9-212ENST00000495265 RUSC2Q8N2Y8 1516 aa26.39■■□□□ 1.82
BRD9-212ENST00000495265 CSRNP3Q8WYN3 585 aa26.39■■□□□ 1.82
BRD9-212ENST00000495265 TOP2AP11388 1531 aaKnown RBP26.38■■□□□ 1.81
BRD9-212ENST00000495265 HNRNPUL2Q1KMD3 747 aaKnown RBP26.35■■□□□ 1.81
BRD9-212ENST00000495265 SMARCA2P51531 1590 aa26.31■■□□□ 1.8
BRD9-212ENST00000495265 EEA1Q15075 1411 aa26.29■■□□□ 1.8
BRD9-212ENST00000495265 GOLGA3Q08378 1498 aa26.25■■□□□ 1.79
BRD9-212ENST00000495265 PABPN1Q86U42 306 aaKnown RBP eCLIP26.2■■□□□ 1.78
BRD9-212ENST00000495265 SMARCA4P51532 1647 aa26.19■■□□□ 1.78
BRD9-212ENST00000495265 CLIP1P30622 1438 aa26.03■■□□□ 1.76
BRD9-212ENST00000495265 CEP164Q9UPV0 1460 aa26.01■■□□□ 1.75
BRD9-212ENST00000495265 VPS8Q8N3P4 1428 aa25.98■■□□□ 1.75
BRD9-212ENST00000495265 SUPT16HQ9Y5B9 1047 aaKnown RBP25.95■■□□□ 1.74
BRD9-212ENST00000495265 KIF21BO75037 1637 aa25.94■■□□□ 1.74
BRD9-212ENST00000495265 APLP2Q06481 763 aa25.94■■□□□ 1.74
BRD9-212ENST00000495265 RANGAP1P46060 587 aaPredicted RBP25.89■■□□□ 1.73
BRD9-212ENST00000495265 SYNJ1O43426 1573 aa25.87■■□□□ 1.73
BRD9-212ENST00000495265 PEG3Q9GZU2 1588 aa25.87■■□□□ 1.73
BRD9-212ENST00000495265 CLSPNQ9HAW4 1339 aa25.85■■□□□ 1.73
BRD9-212ENST00000495265 DHX57Q6P158 1386 aaKnown RBP25.82■■□□□ 1.72
BRD9-212ENST00000495265 RAPGEF2Q9Y4G8 1499 aa25.81■■□□□ 1.72
BRD9-212ENST00000495265 BAZ1BQ9UIG0 1483 aaKnown RBP25.78■■□□□ 1.72
BRD9-212ENST00000495265 TSHZ2Q9NRE2 1034 aa25.74■■□□□ 1.71
BRD9-212ENST00000495265 ATAD2BQ9ULI0 1458 aa25.65■■□□□ 1.7
BRD9-212ENST00000495265 KANK4Q5T7N3 995 aaPredicted RBP25.6■■□□□ 1.69
BRD9-212ENST00000495265 ANP32EQ9BTT0 268 aa25.58■■□□□ 1.69
BRD9-212ENST00000495265 KCNH8Q96L42 1107 aa25.57■■□□□ 1.68
BRD9-212ENST00000495265 ARAP1Q96P48 1450 aa25.53■■□□□ 1.68
BRD9-212ENST00000495265 RRBP1Q9P2E9 1410 aaKnown RBP25.46■■□□□ 1.67
BRD9-212ENST00000495265 BCANQ96GW7 911 aa25.46■■□□□ 1.67
BRD9-212ENST00000495265 HMGXB3Q12766 1538 aa25.44■■□□□ 1.66
BRD9-212ENST00000495265 NCAPD3P42695 1498 aa25.41■■□□□ 1.66
BRD9-212ENST00000495265 TOP2BQ02880 1626 aa25.4■■□□□ 1.66
BRD9-212ENST00000495265 CUX2O14529 1486 aa25.4■■□□□ 1.66
BRD9-212ENST00000495265 ITGAEP38570 1179 aa25.4■■□□□ 1.66
BRD9-212ENST00000495265 PRXQ9BXM0 1461 aa25.39■■□□□ 1.65
BRD9-212ENST00000495265 ERICH3Q5RHP9 1530 aa25.38■■□□□ 1.65
BRD9-212ENST00000495265 CCNB3Q8WWL7 1395 aa25.36■■□□□ 1.65
BRD9-212ENST00000495265 FKBP8Q14318 412 aa25.35■■□□□ 1.65
BRD9-212ENST00000495265 MAPKBP1O60336 1514 aa25.28■■□□□ 1.64
BRD9-212ENST00000495265 RAB3GAP2Q9H2M9 1393 aa25.27■■□□□ 1.64
BRD9-212ENST00000495265 BIVM-ERCC5R4GMW8 1640 aa25.27■■□□□ 1.64
BRD9-212ENST00000495265 DDX10Q13206 875 aaKnown RBP25.27■■□□□ 1.64
BRD9-212ENST00000495265 BCL11AQ9H165 835 aa25.26■■□□□ 1.63
BRD9-212ENST00000495265 CC2D2AQ9P2K1 1620 aa25.25■■□□□ 1.63
BRD9-212ENST00000495265 ARHGAP35Q9NRY4 1499 aa25.18■■□□□ 1.62
BRD9-212ENST00000495265 WDR97A6NE52 1622 aa25.17■■□□□ 1.62
BRD9-212ENST00000495265 RBM19Q9Y4C8 960 aaKnown RBP25.17■■□□□ 1.62
BRD9-212ENST00000495265 SIN3AQ96ST3 1273 aa25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms