RNA–Protein interactions for RNA: ENST00000494980.5

CHMP2B-205, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 3 BASIC

Gene CHMP2B, Length 1,175 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-205ENST00000494980 ADAMTS12P58397 1594 aa27.74■■■□□ 2.03
CHMP2B-205ENST00000494980 ABCA10Q8WWZ4 1543 aa27.69■■■□□ 2.02
CHMP2B-205ENST00000494980 FBXO41Q8TF61 875 aa27.68■■■□□ 2.02
CHMP2B-205ENST00000494980 PRG4Q92954 1404 aaPredicted RBP27.67■■■□□ 2.02
CHMP2B-205ENST00000494980 NPM1P06748 294 aaKnown RBP eCLIP27.65■■■□□ 2.02
CHMP2B-205ENST00000494980 ADCY10Q96PN6 1610 aa27.63■■■□□ 2.01
CHMP2B-205ENST00000494980 FHAD1B1AJZ9 1412 aa27.51■■□□□ 1.99
CHMP2B-205ENST00000494980 JPH4Q96JJ6 628 aa27.46■■□□□ 1.99
CHMP2B-205ENST00000494980 LMTK3Q96Q04 1460 aa27.45■■□□□ 1.99
CHMP2B-205ENST00000494980 PPRC1Q5VV67 1664 aaKnown RBP27.45■■□□□ 1.98
CHMP2B-205ENST00000494980 RUSC2Q8N2Y8 1516 aa27.4■■□□□ 1.98
CHMP2B-205ENST00000494980 ERICH3Q5RHP9 1530 aa27.32■■□□□ 1.96
CHMP2B-205ENST00000494980 COL17A1Q9UMD9 1497 aaPredicted RBP27.29■■□□□ 1.96
CHMP2B-205ENST00000494980 WRNQ14191 1432 aaPredicted RBP eCLIP27.28■■□□□ 1.96
CHMP2B-205ENST00000494980 TOP2BQ02880 1626 aa27.24■■□□□ 1.95
CHMP2B-205ENST00000494980 GLI2P10070 1586 aa27.24■■□□□ 1.95
CHMP2B-205ENST00000494980 SOCS7O14512 581 aa27.16■■□□□ 1.94
CHMP2B-205ENST00000494980 ASXL2Q76L83 1435 aa27.16■■□□□ 1.94
CHMP2B-205ENST00000494980 PLB1Q6P1J6 1458 aa27.13■■□□□ 1.93
CHMP2B-205ENST00000494980 ILDR2Q71H61 639 aa27.11■■□□□ 1.93
CHMP2B-205ENST00000494980 ABCC2Q92887 1545 aa27.11■■□□□ 1.93
CHMP2B-205ENST00000494980 MAP3K4Q9Y6R4 1608 aa27.1■■□□□ 1.93
CHMP2B-205ENST00000494980 BIVM-ERCC5R4GMW8 1640 aa27.09■■□□□ 1.93
CHMP2B-205ENST00000494980 CUL7Q14999 1698 aa27.09■■□□□ 1.93
CHMP2B-205ENST00000494980 TEX14Q8IWB6 1497 aa27.06■■□□□ 1.92
CHMP2B-205ENST00000494980 PTPRGP23470 1445 aa27.02■■□□□ 1.92
CHMP2B-205ENST00000494980 DISP3Q9P2K9 1392 aa27■■□□□ 1.91
CHMP2B-205ENST00000494980 TTBK1Q5TCY1 1321 aaPredicted RBP27■■□□□ 1.91
CHMP2B-205ENST00000494980 KIAA0586Q9BVV6 1533 aa27■■□□□ 1.91
CHMP2B-205ENST00000494980 EPRSP07814 1512 aaKnown RBP26.99■■□□□ 1.91
CHMP2B-205ENST00000494980 KIF21BO75037 1637 aa26.98■■□□□ 1.91
CHMP2B-205ENST00000494980 UHRF1BP1LA0JNW5 1464 aa26.87■■□□□ 1.89
CHMP2B-205ENST00000494980 TNIKQ9UKE5 1360 aa26.85■■□□□ 1.89
CHMP2B-205ENST00000494980 PCF11O94913 1555 aaKnown RBP26.85■■□□□ 1.89
CHMP2B-205ENST00000494980 PTPRMP28827 1452 aa26.85■■□□□ 1.89
CHMP2B-205ENST00000494980 ZCCHC11Q5TAX3 1644 aaKnown RBP26.79■■□□□ 1.88
CHMP2B-205ENST00000494980 ADAMTSL3P82987 1691 aa26.79■■□□□ 1.88
CHMP2B-205ENST00000494980 KDM5BQ9UGL1 1544 aa26.77■■□□□ 1.88
CHMP2B-205ENST00000494980 CARMIL2Q6F5E8 1435 aa26.77■■□□□ 1.88
CHMP2B-205ENST00000494980 UACAQ9BZF9 1416 aa26.77■■□□□ 1.88
CHMP2B-205ENST00000494980 SPATA31D1Q6ZQQ2 1576 aa26.75■■□□□ 1.87
CHMP2B-205ENST00000494980 CERKQ8TCT0 537 aa26.72■■□□□ 1.87
CHMP2B-205ENST00000494980 CFAP43Q8NDM7 1665 aa26.67■■□□□ 1.86
CHMP2B-205ENST00000494980 MAGI3Q5TCQ9 1506 aa26.67■■□□□ 1.86
CHMP2B-205ENST00000494980 WDR7Q9Y4E6 1490 aa26.67■■□□□ 1.86
CHMP2B-205ENST00000494980 MADDQ8WXG6 1647 aa26.64■■□□□ 1.85
CHMP2B-205ENST00000494980 CD109Q6YHK3 1445 aa26.62■■□□□ 1.85
CHMP2B-205ENST00000494980 IQGAP2Q13576 1575 aa26.61■■□□□ 1.85
CHMP2B-205ENST00000494980 BCORL1Q5H9F3 1711 aa26.59■■□□□ 1.85
CHMP2B-205ENST00000494980 IGF1RP08069 1367 aa26.58■■□□□ 1.85
CHMP2B-205ENST00000494980 DISP1Q96F81 1524 aa26.57■■□□□ 1.84
CHMP2B-205ENST00000494980 HSPA2P54652 639 aa26.57■■□□□ 1.84
CHMP2B-205ENST00000494980 RIMS1Q86UR5 1692 aaKnown RBP26.51■■□□□ 1.83
CHMP2B-205ENST00000494980 ARAP3Q8WWN8 1544 aa26.5■■□□□ 1.83
CHMP2B-205ENST00000494980 KCNH8Q96L42 1107 aa26.44■■□□□ 1.82
CHMP2B-205ENST00000494980 KIF27Q86VH2 1401 aa26.43■■□□□ 1.82
CHMP2B-205ENST00000494980 ARID4BQ4LE39 1312 aaPredicted RBP26.4■■□□□ 1.82
CHMP2B-205ENST00000494980 KIAA0556O60303 1618 aa26.4■■□□□ 1.82
CHMP2B-205ENST00000494980 CARMIL1Q5VZK9 1371 aa26.38■■□□□ 1.81
CHMP2B-205ENST00000494980 UGGT2Q9NYU1 1516 aa26.35■■□□□ 1.81
CHMP2B-205ENST00000494980 PLPPR3Q6T4P5 718 aa26.34■■□□□ 1.81
CHMP2B-205ENST00000494980 RAPGEF3O95398 923 aa26.3■■□□□ 1.8
CHMP2B-205ENST00000494980 FRMPD1Q5SYB0 1578 aa26.29■■□□□ 1.8
CHMP2B-205ENST00000494980 ARHGEF40Q8TER5 1519 aa26.24■■□□□ 1.79
CHMP2B-205ENST00000494980 PHLDB1Q86UU1 1377 aa26.22■■□□□ 1.79
CHMP2B-205ENST00000494980 ABCA8O94911 1581 aa26.22■■□□□ 1.79
CHMP2B-205ENST00000494980 ABCA9Q8IUA7 1624 aa26.18■■□□□ 1.78
CHMP2B-205ENST00000494980 STRCQ7RTU9 1775 aa26.18■■□□□ 1.78
CHMP2B-205ENST00000494980 PREX1Q8TCU6 1659 aa26.15■■□□□ 1.78
CHMP2B-205ENST00000494980 NEO1Q92859 1461 aa26.15■■□□□ 1.78
CHMP2B-205ENST00000494980 FER1L4A9Z1Z3 1794 aa26.15■■□□□ 1.78
CHMP2B-205ENST00000494980 YEATS2Q9ULM3 1422 aa26.13■■□□□ 1.77
CHMP2B-205ENST00000494980 SIGLEC1Q9BZZ2 1709 aa26.11■■□□□ 1.77
CHMP2B-205ENST00000494980 TTC37Q6PGP7 1564 aa26.11■■□□□ 1.77
CHMP2B-205ENST00000494980 SUPT5HO00267 1087 aaKnown RBP26.1■■□□□ 1.77
CHMP2B-205ENST00000494980 POGZQ7Z3K3 1410 aa26.1■■□□□ 1.77
CHMP2B-205ENST00000494980 FANCAO15360 1455 aa26.09■■□□□ 1.77
CHMP2B-205ENST00000494980 DMRT2Q9Y5R5 561 aa26.07■■□□□ 1.76
CHMP2B-205ENST00000494980 RICTORQ6R327 1708 aa26.06■■□□□ 1.76
CHMP2B-205ENST00000494980 ARID3CA6NKF2 412 aa26.02■■□□□ 1.76
CHMP2B-205ENST00000494980 RAPGEF2Q9Y4G8 1499 aa26■■□□□ 1.75
CHMP2B-205ENST00000494980 CTTNBP2Q8WZ74 1663 aa25.99■■□□□ 1.75
CHMP2B-205ENST00000494980 LTBP4Q8N2S1 1624 aa25.99■■□□□ 1.75
CHMP2B-205ENST00000494980 AKNAQ7Z591 1439 aa25.99■■□□□ 1.75
CHMP2B-205ENST00000494980 GOLGA3Q08378 1498 aa25.98■■□□□ 1.75
CHMP2B-205ENST00000494980 IQSEC2Q5JU85 1478 aa25.98■■□□□ 1.75
CHMP2B-205ENST00000494980 MLECQ14165 292 aa25.97■■□□□ 1.75
CHMP2B-205ENST00000494980 DENND4BO75064 1496 aaPredicted RBP25.96■■□□□ 1.75
CHMP2B-205ENST00000494980 ATP10BO94823 1461 aa25.95■■□□□ 1.74
CHMP2B-205ENST00000494980 ZFYVE16Q7Z3T8 1539 aa25.93■■□□□ 1.74
CHMP2B-205ENST00000494980 PTPRTO14522 1441 aa25.93■■□□□ 1.74
CHMP2B-205ENST00000494980 ZMYM4Q5VZL5 1548 aa25.92■■□□□ 1.74
CHMP2B-205ENST00000494980 EFCAB5A4FU69 1503 aa25.91■■□□□ 1.74
CHMP2B-205ENST00000494980 FHOD3Q2V2M9 1422 aa25.9■■□□□ 1.74
CHMP2B-205ENST00000494980 UHRF1BP1Q6BDS2 1440 aa25.88■■□□□ 1.73
CHMP2B-205ENST00000494980 ARHGEF12Q9NZN5 1544 aa25.88■■□□□ 1.73
CHMP2B-205ENST00000494980 MED1Q15648 1581 aaPredicted RBP25.86■■□□□ 1.73
CHMP2B-205ENST00000494980 SETD1BQ9UPS6 1966 aaKnown RBP25.86■■□□□ 1.73
CHMP2B-205ENST00000494980 CEBPAP49715 358 aaPredicted RBP25.85■■□□□ 1.73
CHMP2B-205ENST00000494980 CHIC1Q5VXU3 224 aa25.84■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms