RNA–Protein interactions for RNA: ENST00000493792.1

TRAPPC12-222, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-222ENST00000493792 ERICH3Q5RHP9 1530 aa17.82■□□□□ 0.44
TRAPPC12-222ENST00000493792 ABCC10Q5T3U5 1492 aa17.82■□□□□ 0.44
TRAPPC12-222ENST00000493792 KIF13AQ9H1H9 1805 aa17.81■□□□□ 0.44
TRAPPC12-222ENST00000493792 NPM1P06748 294 aaKnown RBP eCLIP17.78■□□□□ 0.44
TRAPPC12-222ENST00000493792 ILDR1Q86SU0 546 aaPredicted RBP17.75■□□□□ 0.43
TRAPPC12-222ENST00000493792 MAPKBP1O60336 1514 aa17.71■□□□□ 0.43
TRAPPC12-222ENST00000493792 KIF27Q86VH2 1401 aa17.67■□□□□ 0.42
TRAPPC12-222ENST00000493792 DIP2BQ9P265 1576 aa17.66■□□□□ 0.42
TRAPPC12-222ENST00000493792 IGF1RP08069 1367 aa17.66■□□□□ 0.42
TRAPPC12-222ENST00000493792 ADCY10Q96PN6 1610 aa17.63■□□□□ 0.41
TRAPPC12-222ENST00000493792 RUSC2Q8N2Y8 1516 aa17.6■□□□□ 0.41
TRAPPC12-222ENST00000493792 KDM6BO15054 1643 aa17.59■□□□□ 0.41
TRAPPC12-222ENST00000493792 KIAA0586Q9BVV6 1533 aa17.59■□□□□ 0.41
TRAPPC12-222ENST00000493792 PTPRGP23470 1445 aa17.55■□□□□ 0.4
TRAPPC12-222ENST00000493792 CUL7Q14999 1698 aa17.55■□□□□ 0.4
TRAPPC12-222ENST00000493792 CARMIL1Q5VZK9 1371 aa17.51■□□□□ 0.39
TRAPPC12-222ENST00000493792 COL17A1Q9UMD9 1497 aaPredicted RBP17.5■□□□□ 0.39
TRAPPC12-222ENST00000493792 TSPOAP1O95153 1857 aa17.48■□□□□ 0.39
TRAPPC12-222ENST00000493792 TTBK1Q5TCY1 1321 aaPredicted RBP17.47■□□□□ 0.39
TRAPPC12-222ENST00000493792 ASXL2Q76L83 1435 aa17.47■□□□□ 0.39
TRAPPC12-222ENST00000493792 TNIKQ9UKE5 1360 aa17.46■□□□□ 0.39
TRAPPC12-222ENST00000493792 ABCC2Q92887 1545 aa17.46■□□□□ 0.39
TRAPPC12-222ENST00000493792 ADGRL1O94910 1474 aa17.45■□□□□ 0.38
TRAPPC12-222ENST00000493792 PLB1Q6P1J6 1458 aa17.44■□□□□ 0.38
TRAPPC12-222ENST00000493792 GLI2P10070 1586 aa17.42■□□□□ 0.38
TRAPPC12-222ENST00000493792 CHIC1Q5VXU3 224 aa17.42■□□□□ 0.38
TRAPPC12-222ENST00000493792 UHRF1BP1LA0JNW5 1464 aa17.39■□□□□ 0.37
TRAPPC12-222ENST00000493792 PPRC1Q5VV67 1664 aaKnown RBP17.39■□□□□ 0.37
TRAPPC12-222ENST00000493792 CARMIL2Q6F5E8 1435 aa17.38■□□□□ 0.37
TRAPPC12-222ENST00000493792 RAPGEF2Q9Y4G8 1499 aa17.38■□□□□ 0.37
TRAPPC12-222ENST00000493792 FAM9AQ8IZU1 332 aaPredicted RBP17.38■□□□□ 0.37
TRAPPC12-222ENST00000493792 UACAQ9BZF9 1416 aa17.38■□□□□ 0.37
TRAPPC12-222ENST00000493792 EPRSP07814 1512 aaKnown RBP17.35■□□□□ 0.37
TRAPPC12-222ENST00000493792 IQGAP2Q13576 1575 aa17.33■□□□□ 0.37
TRAPPC12-222ENST00000493792 CSRNP3Q8WYN3 585 aa17.33■□□□□ 0.36
TRAPPC12-222ENST00000493792 KDM5BQ9UGL1 1544 aa17.32■□□□□ 0.36
TRAPPC12-222ENST00000493792 DISP1Q96F81 1524 aa17.31■□□□□ 0.36
TRAPPC12-222ENST00000493792 EEA1Q15075 1411 aa17.31■□□□□ 0.36
TRAPPC12-222ENST00000493792 HECW2Q9P2P5 1572 aa17.31■□□□□ 0.36
TRAPPC12-222ENST00000493792 PRXQ9BXM0 1461 aa17.28■□□□□ 0.36
TRAPPC12-222ENST00000493792 UGGT2Q9NYU1 1516 aa17.26■□□□□ 0.35
TRAPPC12-222ENST00000493792 TEX14Q8IWB6 1497 aa17.26■□□□□ 0.35
TRAPPC12-222ENST00000493792 MAP3K4Q9Y6R4 1608 aa17.25■□□□□ 0.35
TRAPPC12-222ENST00000493792 CTTNBP2Q8WZ74 1663 aa17.23■□□□□ 0.35
TRAPPC12-222ENST00000493792 EHMT2Q96KQ7 1210 aa17.22■□□□□ 0.35
TRAPPC12-222ENST00000493792 FBXO41Q8TF61 875 aa17.21■□□□□ 0.35
TRAPPC12-222ENST00000493792 KCNH8Q96L42 1107 aa17.18■□□□□ 0.34
TRAPPC12-222ENST00000493792 CD109Q6YHK3 1445 aa17.18■□□□□ 0.34
TRAPPC12-222ENST00000493792 WDR7Q9Y4E6 1490 aa17.18■□□□□ 0.34
TRAPPC12-222ENST00000493792 KIAA0556O60303 1618 aa17.17■□□□□ 0.34
TRAPPC12-222ENST00000493792 MAGI3Q5TCQ9 1506 aa17.16■□□□□ 0.34
TRAPPC12-222ENST00000493792 ZCCHC11Q5TAX3 1644 aaKnown RBP17.16■□□□□ 0.34
TRAPPC12-222ENST00000493792 RANGAP1P46060 587 aaPredicted RBP17.14■□□□□ 0.33
TRAPPC12-222ENST00000493792 GOLGA3Q08378 1498 aa17.13■□□□□ 0.33
TRAPPC12-222ENST00000493792 KIF21BO75037 1637 aa17.13■□□□□ 0.33
TRAPPC12-222ENST00000493792 UBTFP17480 764 aaKnown RBP17.1■□□□□ 0.33
TRAPPC12-222ENST00000493792 P3H3Q8IVL6 736 aa17.08■□□□□ 0.32
TRAPPC12-222ENST00000493792 ARAP3Q8WWN8 1544 aa17.05■□□□□ 0.32
TRAPPC12-222ENST00000493792 ABCA8O94911 1581 aa17.04■□□□□ 0.32
TRAPPC12-222ENST00000493792 PTPRMP28827 1452 aa17.03■□□□□ 0.32
TRAPPC12-222ENST00000493792 RAPGEF3O95398 923 aa17.02■□□□□ 0.32
TRAPPC12-222ENST00000493792 CFAP43Q8NDM7 1665 aa17■□□□□ 0.31
TRAPPC12-222ENST00000493792 PHLDB1Q86UU1 1377 aa16.99■□□□□ 0.31
TRAPPC12-222ENST00000493792 ARID3CA6NKF2 412 aa16.97■□□□□ 0.31
TRAPPC12-222ENST00000493792 ATP10BO94823 1461 aa16.97■□□□□ 0.31
TRAPPC12-222ENST00000493792 SAMD9Q5K651 1589 aa16.97■□□□□ 0.31
TRAPPC12-222ENST00000493792 ADAMTSL3P82987 1691 aa16.95■□□□□ 0.3
TRAPPC12-222ENST00000493792 FHOD3Q2V2M9 1422 aa16.94■□□□□ 0.3
TRAPPC12-222ENST00000493792 EFCAB5A4FU69 1503 aa16.91■□□□□ 0.3
TRAPPC12-222ENST00000493792 LMTK3Q96Q04 1460 aa16.91■□□□□ 0.3
TRAPPC12-222ENST00000493792 ARID4BQ4LE39 1312 aaPredicted RBP16.9■□□□□ 0.3
TRAPPC12-222ENST00000493792 HSPA2P54652 639 aa16.89■□□□□ 0.29
TRAPPC12-222ENST00000493792 NEO1Q92859 1461 aa16.87■□□□□ 0.29
TRAPPC12-222ENST00000493792 PCF11O94913 1555 aaKnown RBP16.87■□□□□ 0.29
TRAPPC12-222ENST00000493792 RAPGEF6Q8TEU7 1601 aa16.85■□□□□ 0.29
TRAPPC12-222ENST00000493792 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.85■□□□□ 0.29
TRAPPC12-222ENST00000493792 HNRNPUL2Q1KMD3 747 aaKnown RBP16.85■□□□□ 0.29
TRAPPC12-222ENST00000493792 ABCA9Q8IUA7 1624 aa16.85■□□□□ 0.29
TRAPPC12-222ENST00000493792 CERKQ8TCT0 537 aa16.84■□□□□ 0.29
TRAPPC12-222ENST00000493792 ARHGAP35Q9NRY4 1499 aa16.83■□□□□ 0.28
TRAPPC12-222ENST00000493792 ATP1B4Q9UN42 357 aaPredicted RBP16.83■□□□□ 0.28
TRAPPC12-222ENST00000493792 NUP153P49790 1475 aaKnown RBP16.82■□□□□ 0.28
TRAPPC12-222ENST00000493792 BCORL1Q5H9F3 1711 aa16.82■□□□□ 0.28
TRAPPC12-222ENST00000493792 MADDQ8WXG6 1647 aa16.81■□□□□ 0.28
TRAPPC12-222ENST00000493792 FRMPD1Q5SYB0 1578 aa16.81■□□□□ 0.28
TRAPPC12-222ENST00000493792 FMN1Q68DA7 1419 aa16.78■□□□□ 0.28
TRAPPC12-222ENST00000493792 PLPPR3Q6T4P5 718 aa16.77■□□□□ 0.28
TRAPPC12-222ENST00000493792 ILDR2Q71H61 639 aa16.77■□□□□ 0.28
TRAPPC12-222ENST00000493792 CLIP1P30622 1438 aa16.77■□□□□ 0.27
TRAPPC12-222ENST00000493792 DENND4BO75064 1496 aaPredicted RBP16.76■□□□□ 0.27
TRAPPC12-222ENST00000493792 LOC105371045A0A1W2PR82 267 aa16.76■□□□□ 0.27
TRAPPC12-222ENST00000493792 AKNAQ7Z591 1439 aa16.76■□□□□ 0.27
TRAPPC12-222ENST00000493792 PLEKHD1A6NEE1 506 aa16.75■□□□□ 0.27
TRAPPC12-222ENST00000493792 YEATS2Q9ULM3 1422 aa16.71■□□□□ 0.27
TRAPPC12-222ENST00000493792 HECW1Q76N89 1606 aa16.71■□□□□ 0.27
TRAPPC12-222ENST00000493792 MLECQ14165 292 aa16.71■□□□□ 0.27
TRAPPC12-222ENST00000493792 SOCS7O14512 581 aa16.7■□□□□ 0.26
TRAPPC12-222ENST00000493792 CDK13Q14004 1512 aaKnown RBP16.7■□□□□ 0.26
TRAPPC12-222ENST00000493792 ARHGEF40Q8TER5 1519 aa16.7■□□□□ 0.26
TRAPPC12-222ENST00000493792 POGZQ7Z3K3 1410 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms