RNA–Protein interactions for RNA: ENST00000492259.6

RTEL1-TNFRSF6B-203, Transcript of RTEL1-TNFRSF6B readthrough (NMD candidate), humanhuman

APPRIS ALT2 TSL 5

Gene RTEL1-TNFRSF6B, Length 4,824 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTEL1-TNFRSF6B-203ENST00000492259 BECN1Q14457 450 aa20.44■□□□□ 0.86
RTEL1-TNFRSF6B-203ENST00000492259 DEKP35659 375 aaKnown RBP20.42■□□□□ 0.86
RTEL1-TNFRSF6B-203ENST00000492259 MRS2Q9HD23 443 aa20.42■□□□□ 0.86
RTEL1-TNFRSF6B-203ENST00000492259 SUPT16HQ9Y5B9 1047 aaKnown RBP20.42■□□□□ 0.86
RTEL1-TNFRSF6B-203ENST00000492259 SALL2Q9Y467 1007 aaPredicted RBP20.41■□□□□ 0.86
RTEL1-TNFRSF6B-203ENST00000492259 ZNF777Q9ULD5 760 aaPredicted RBP20.41■□□□□ 0.86
RTEL1-TNFRSF6B-203ENST00000492259 NOP58Q9Y2X3 529 aaKnown RBP20.39■□□□□ 0.85
RTEL1-TNFRSF6B-203ENST00000492259 HIRIP3Q9BW71 556 aaPredicted RBP20.38■□□□□ 0.85
RTEL1-TNFRSF6B-203ENST00000492259 SLC24A1O60721 1099 aa20.36■□□□□ 0.85
RTEL1-TNFRSF6B-203ENST00000492259 TMC1Q8TDI8 760 aa20.36■□□□□ 0.85
RTEL1-TNFRSF6B-203ENST00000492259 WRNQ14191 1432 aaPredicted RBP eCLIP20.36■□□□□ 0.85
RTEL1-TNFRSF6B-203ENST00000492259 CEP164Q9UPV0 1460 aa20.35■□□□□ 0.85
RTEL1-TNFRSF6B-203ENST00000492259 NPM1P06748 294 aaKnown RBP eCLIP20.35■□□□□ 0.85
RTEL1-TNFRSF6B-203ENST00000492259 GOLGA6L22H0YM25 854 aa20.34■□□□□ 0.85
RTEL1-TNFRSF6B-203ENST00000492259 EIF4G2P78344 907 aaKnown RBP eCLIP20.33■□□□□ 0.85
RTEL1-TNFRSF6B-203ENST00000492259 DNTTIP2Q5QJE6 756 aaKnown RBP20.33■□□□□ 0.85
RTEL1-TNFRSF6B-203ENST00000492259 CHMP7Q8WUX9 453 aaPredicted RBP20.33■□□□□ 0.84
RTEL1-TNFRSF6B-203ENST00000492259 LAS1LQ9Y4W2 734 aaKnown RBP20.32■□□□□ 0.84
RTEL1-TNFRSF6B-203ENST00000492259 PTMAP06454 111 aaKnown RBP20.3■□□□□ 0.84
RTEL1-TNFRSF6B-203ENST00000492259 NCLP19338 710 aaKnown RBP20.29■□□□□ 0.84
RTEL1-TNFRSF6B-203ENST00000492259 CHIC2Q9UKJ5 165 aa20.28■□□□□ 0.84
RTEL1-TNFRSF6B-203ENST00000492259 MTUS2Q5JR59 1369 aa20.28■□□□□ 0.84
RTEL1-TNFRSF6B-203ENST00000492259 CECR2Q9BXF3 1484 aa20.25■□□□□ 0.83
RTEL1-TNFRSF6B-203ENST00000492259 KIF27Q86VH2 1401 aa20.23■□□□□ 0.83
RTEL1-TNFRSF6B-203ENST00000492259 PPP4R2Q9NY27 417 aa20.19■□□□□ 0.82
RTEL1-TNFRSF6B-203ENST00000492259 RBM19Q9Y4C8 960 aaKnown RBP20.18■□□□□ 0.82
RTEL1-TNFRSF6B-203ENST00000492259 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.18■□□□□ 0.82
RTEL1-TNFRSF6B-203ENST00000492259 TIMELESSQ9UNS1 1208 aa20.17■□□□□ 0.82
RTEL1-TNFRSF6B-203ENST00000492259 ESF1Q9H501 851 aaKnown RBP20.15■□□□□ 0.82
RTEL1-TNFRSF6B-203ENST00000492259 SOGA1O94964 1423 aa20.13■□□□□ 0.81
RTEL1-TNFRSF6B-203ENST00000492259 SIN3AQ96ST3 1273 aa20.12■□□□□ 0.81
RTEL1-TNFRSF6B-203ENST00000492259 CCER2I3L3R5 266 aa20.12■□□□□ 0.81
RTEL1-TNFRSF6B-203ENST00000492259 AMER1Q5JTC6 1135 aaPredicted RBP20.12■□□□□ 0.81
RTEL1-TNFRSF6B-203ENST00000492259 CCNB3Q8WWL7 1395 aa20.12■□□□□ 0.81
RTEL1-TNFRSF6B-203ENST00000492259 TSPY4P0CV99 314 aa20.11■□□□□ 0.81
RTEL1-TNFRSF6B-203ENST00000492259 TSPY10P0CW01 314 aa20.11■□□□□ 0.81
RTEL1-TNFRSF6B-203ENST00000492259 WDR43Q15061 677 aaKnown RBP eCLIP20.1■□□□□ 0.81
RTEL1-TNFRSF6B-203ENST00000492259 L1TD1Q5T7N2 865 aaKnown RBP20.1■□□□□ 0.81
RTEL1-TNFRSF6B-203ENST00000492259 RRP7BPQ9NSQ0 103 aa20.1■□□□□ 0.81
RTEL1-TNFRSF6B-203ENST00000492259 VPS8Q8N3P4 1428 aa20.09■□□□□ 0.81
RTEL1-TNFRSF6B-203ENST00000492259 SMARCA2P51531 1590 aa20.08■□□□□ 0.81
RTEL1-TNFRSF6B-203ENST00000492259 ERCC6Q03468 1493 aa20.06■□□□□ 0.8
RTEL1-TNFRSF6B-203ENST00000492259 PNNQ9H307 717 aaKnown RBP20.04■□□□□ 0.8
RTEL1-TNFRSF6B-203ENST00000492259 ARID4BQ4LE39 1312 aaPredicted RBP20.04■□□□□ 0.8
RTEL1-TNFRSF6B-203ENST00000492259 MROH2BQ7Z745 1585 aa20.04■□□□□ 0.8
RTEL1-TNFRSF6B-203ENST00000492259 MYH16Q9H6N6 1097 aa20.02■□□□□ 0.8
RTEL1-TNFRSF6B-203ENST00000492259 MSNP26038 577 aaKnown RBP20.01■□□□□ 0.79
RTEL1-TNFRSF6B-203ENST00000492259 KDM2AQ9Y2K7 1162 aa20.01■□□□□ 0.79
RTEL1-TNFRSF6B-203ENST00000492259 TSHZ2Q9NRE2 1034 aa20.01■□□□□ 0.79
RTEL1-TNFRSF6B-203ENST00000492259 PLEKHD1A6NEE1 506 aa20■□□□□ 0.79
RTEL1-TNFRSF6B-203ENST00000492259 B4GALNT3Q6L9W6 998 aa19.98■□□□□ 0.79
RTEL1-TNFRSF6B-203ENST00000492259 STAG3Q9UJ98 1225 aa19.97■□□□□ 0.79
RTEL1-TNFRSF6B-203ENST00000492259 CHAF1AQ13111 956 aaPredicted RBP19.97■□□□□ 0.79
RTEL1-TNFRSF6B-203ENST00000492259 CHGAP10645 457 aaKnown RBP19.95■□□□□ 0.78
RTEL1-TNFRSF6B-203ENST00000492259 PLCB2Q00722 1185 aa19.95■□□□□ 0.78
RTEL1-TNFRSF6B-203ENST00000492259 ZRSR1Q15695 479 aaKnown RBP19.94■□□□□ 0.78
RTEL1-TNFRSF6B-203ENST00000492259 CCDC88BA6NC98 1476 aa19.94■□□□□ 0.78
RTEL1-TNFRSF6B-203ENST00000492259 SETD5Q9C0A6 1442 aa19.92■□□□□ 0.78
RTEL1-TNFRSF6B-203ENST00000492259 RGS3P49796 1198 aa19.91■□□□□ 0.78
RTEL1-TNFRSF6B-203ENST00000492259 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.91■□□□□ 0.785e-7■■□□□ 14
RTEL1-TNFRSF6B-203ENST00000492259 FHAD1B1AJZ9 1412 aa19.9■□□□□ 0.78
RTEL1-TNFRSF6B-203ENST00000492259 VSIG10Q8N0Z9 540 aa19.89■□□□□ 0.77
RTEL1-TNFRSF6B-203ENST00000492259 CUX2O14529 1486 aa19.88■□□□□ 0.77
RTEL1-TNFRSF6B-203ENST00000492259 KANK4Q5T7N3 995 aaPredicted RBP19.88■□□□□ 0.77
RTEL1-TNFRSF6B-203ENST00000492259 PDS5BQ9NTI5 1447 aa19.87■□□□□ 0.77
RTEL1-TNFRSF6B-203ENST00000492259 CARMIL1Q5VZK9 1371 aa19.86■□□□□ 0.77
RTEL1-TNFRSF6B-203ENST00000492259 HSP90AA2PQ14568 343 aaPredicted RBP19.86■□□□□ 0.77
RTEL1-TNFRSF6B-203ENST00000492259 ABCC8Q09428 1581 aa19.86■□□□□ 0.77
RTEL1-TNFRSF6B-203ENST00000492259 TNNT3P45378 269 aaPredicted RBP19.85■□□□□ 0.77
RTEL1-TNFRSF6B-203ENST00000492259 TOP2AP11388 1531 aaKnown RBP19.85■□□□□ 0.77
RTEL1-TNFRSF6B-203ENST00000492259 NRDCO43847 1150 aa19.83■□□□□ 0.77
RTEL1-TNFRSF6B-203ENST00000492259 KCNH8Q96L42 1107 aa19.83■□□□□ 0.76
RTEL1-TNFRSF6B-203ENST00000492259 RSPH6AQ9H0K4 717 aa19.83■□□□□ 0.76
RTEL1-TNFRSF6B-203ENST00000492259 TPRNQ4KMQ1 711 aa19.82■□□□□ 0.76
RTEL1-TNFRSF6B-203ENST00000492259 CARD11Q9BXL7 1154 aa19.82■□□□□ 0.76
RTEL1-TNFRSF6B-203ENST00000492259 HSP90AB1P08238 724 aaKnown RBP19.81■□□□□ 0.76
RTEL1-TNFRSF6B-203ENST00000492259 RAB3GAP2Q9H2M9 1393 aa19.81■□□□□ 0.76
RTEL1-TNFRSF6B-203ENST00000492259 ARID3AQ99856 593 aa19.81■□□□□ 0.76
RTEL1-TNFRSF6B-203ENST00000492259 CFDP1Q9UEE9 299 aaPredicted RBP19.8■□□□□ 0.76
RTEL1-TNFRSF6B-203ENST00000492259 SENP3-EIF4A1A0A087X0R7 540 aa19.79■□□□□ 0.76
RTEL1-TNFRSF6B-203ENST00000492259 GOLGA6L6A8MZA4 724 aa19.79■□□□□ 0.76
RTEL1-TNFRSF6B-203ENST00000492259 PPP1R15AO75807 674 aaPredicted RBP19.78■□□□□ 0.76
RTEL1-TNFRSF6B-203ENST00000492259 CASC1Q6TDU7 716 aa19.77■□□□□ 0.76
RTEL1-TNFRSF6B-203ENST00000492259 HSPA5P11021 654 aaKnown RBP19.76■□□□□ 0.75
RTEL1-TNFRSF6B-203ENST00000492259 HSCBQ8IWL3 235 aa19.74■□□□□ 0.75
RTEL1-TNFRSF6B-203ENST00000492259 CDCA8Q53HL2 280 aa19.73■□□□□ 0.75
RTEL1-TNFRSF6B-203ENST00000492259 WIZO95785 1651 aa19.72■□□□□ 0.75
RTEL1-TNFRSF6B-203ENST00000492259 DHX57Q6P158 1386 aaKnown RBP19.72■□□□□ 0.75
RTEL1-TNFRSF6B-203ENST00000492259 KNSTRNQ9Y448 316 aa19.72■□□□□ 0.75
RTEL1-TNFRSF6B-203ENST00000492259 CADPSQ9ULU8 1353 aa19.71■□□□□ 0.75
RTEL1-TNFRSF6B-203ENST00000492259 ATAD2BQ9ULI0 1458 aa19.71■□□□□ 0.75
RTEL1-TNFRSF6B-203ENST00000492259 KIAA2012Q0VF49 1180 aa19.71■□□□□ 0.74
RTEL1-TNFRSF6B-203ENST00000492259 IPO9Q96P70 1041 aaKnown RBP19.71■□□□□ 0.74
RTEL1-TNFRSF6B-203ENST00000492259 RGL3Q3MIN7 710 aa19.7■□□□□ 0.74
RTEL1-TNFRSF6B-203ENST00000492259 FTSJ3Q8IY81 847 aaKnown RBP19.69■□□□□ 0.74
RTEL1-TNFRSF6B-203ENST00000492259 ARHGAP35Q9NRY4 1499 aa19.68■□□□□ 0.74
RTEL1-TNFRSF6B-203ENST00000492259 SMARCA4P51532 1647 aa19.67■□□□□ 0.74
RTEL1-TNFRSF6B-203ENST00000492259 EIF4G1Q04637 1599 aaKnown RBP19.67■□□□□ 0.74
RTEL1-TNFRSF6B-203ENST00000492259 GZF1Q9H116 711 aaPredicted RBP19.67■□□□□ 0.74
RTEL1-TNFRSF6B-203ENST00000492259 GOLGA6L3A6NEY3 463 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms