RNA–Protein interactions for RNA: ENST00000491383.5

KDM3A-214, Transcript of lysine demethylase 3A, humanhuman

TSL 1 (best)

Gene KDM3A, Length 4,485 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-214ENST00000491383 POLA1P09884 1462 aaPredicted RBP7.29□□□□□ -1.24
KDM3A-214ENST00000491383 THOC2Q8NI27 1593 aaKnown RBP7.29□□□□□ -1.24
KDM3A-214ENST00000491383 KIF27Q86VH2 1401 aa7.29□□□□□ -1.24
KDM3A-214ENST00000491383 FKBP8Q14318 412 aa7.29□□□□□ -1.24
KDM3A-214ENST00000491383 KLHL34Q8N239 644 aa7.28□□□□□ -1.24
KDM3A-214ENST00000491383 TIMELESSQ9UNS1 1208 aa7.27□□□□□ -1.25
KDM3A-214ENST00000491383 MIER1Q8N108 512 aa7.27□□□□□ -1.25
KDM3A-214ENST00000491383 IFT140Q96RY7 1462 aa7.27□□□□□ -1.25
KDM3A-214ENST00000491383 CUX2O14529 1486 aa7.26□□□□□ -1.25
KDM3A-214ENST00000491383 ABCA10Q8WWZ4 1543 aa7.26□□□□□ -1.25
KDM3A-214ENST00000491383 CSRNP3Q8WYN3 585 aa7.25□□□□□ -1.25
KDM3A-214ENST00000491383 AEBP2Q6ZN18 517 aaPredicted RBP7.25□□□□□ -1.25
KDM3A-214ENST00000491383 ITGAEP38570 1179 aa7.25□□□□□ -1.25
KDM3A-214ENST00000491383 RAD54L2Q9Y4B4 1467 aa7.25□□□□□ -1.25
KDM3A-214ENST00000491383 WDR97A6NE52 1622 aa7.24□□□□□ -1.25
KDM3A-214ENST00000491383 ANP32CO43423 234 aa7.23□□□□□ -1.25
KDM3A-214ENST00000491383 ANP32AP39687 249 aaKnown RBP7.23□□□□□ -1.25
KDM3A-214ENST00000491383 TARBP1Q13395 1621 aaKnown RBP7.22□□□□□ -1.25
KDM3A-214ENST00000491383 ATP1B4Q9UN42 357 aaPredicted RBP7.22□□□□□ -1.25
KDM3A-214ENST00000491383 RUSC2Q8N2Y8 1516 aa7.21□□□□□ -1.26
KDM3A-214ENST00000491383 GAPVD1Q14C86 1478 aa7.21□□□□□ -1.26
KDM3A-214ENST00000491383 GLIPR1L2Q4G1C9 344 aa7.21□□□□□ -1.26
KDM3A-214ENST00000491383 GOLGA3Q08378 1498 aa7.2□□□□□ -1.26
KDM3A-214ENST00000491383 KIF21BO75037 1637 aa7.2□□□□□ -1.26
KDM3A-214ENST00000491383 TDRD9Q8NDG6 1382 aaKnown RBP7.19□□□□□ -1.26
KDM3A-214ENST00000491383 ABCA5Q8WWZ7 1642 aa7.19□□□□□ -1.26
KDM3A-214ENST00000491383 ERICH3Q5RHP9 1530 aa7.19□□□□□ -1.26
KDM3A-214ENST00000491383 CUL7Q14999 1698 aa7.19□□□□□ -1.26
KDM3A-214ENST00000491383 NBR1Q14596 966 aa7.19□□□□□ -1.26
KDM3A-214ENST00000491383 GRIN2BQ13224 1484 aa7.18□□□□□ -1.26
KDM3A-214ENST00000491383 IGF1RP08069 1367 aa7.18□□□□□ -1.26
KDM3A-214ENST00000491383 SUPT16HQ9Y5B9 1047 aaKnown RBP7.17□□□□□ -1.26
KDM3A-214ENST00000491383 CARMIL1Q5VZK9 1371 aa7.17□□□□□ -1.26
KDM3A-214ENST00000491383 PBRM1Q86U86 1689 aa7.17□□□□□ -1.26
KDM3A-214ENST00000491383 PRXQ9BXM0 1461 aa7.16□□□□□ -1.26
KDM3A-214ENST00000491383 AQRO60306 1485 aaKnown RBP eCLIP7.16□□□□□ -1.264e-7■■■■□ 24.7
KDM3A-214ENST00000491383 RAPGEF2Q9Y4G8 1499 aa7.16□□□□□ -1.26
KDM3A-214ENST00000491383 EIF4G3O43432 1585 aaKnown RBP7.16□□□□□ -1.26
KDM3A-214ENST00000491383 ZNF608Q9ULD9 1512 aaPredicted RBP7.15□□□□□ -1.26
KDM3A-214ENST00000491383 FHAD1B1AJZ9 1412 aa7.14□□□□□ -1.27
KDM3A-214ENST00000491383 TNIKQ9UKE5 1360 aa7.14□□□□□ -1.27
KDM3A-214ENST00000491383 MAGI1Q96QZ7 1491 aaPredicted RBP7.14□□□□□ -1.27
KDM3A-214ENST00000491383 POLR3GLQ9BT43 218 aa7.14□□□□□ -1.27
KDM3A-214ENST00000491383 ZBTB47Q9UFB7 747 aaPredicted RBP7.13□□□□□ -1.27
KDM3A-214ENST00000491383 CNGB1Q14028 1251 aaPredicted RBP7.13□□□□□ -1.27
KDM3A-214ENST00000491383 ARXQ96QS3 562 aa7.12□□□□□ -1.27
KDM3A-214ENST00000491383 ADAMTS12P58397 1594 aa7.12□□□□□ -1.27
KDM3A-214ENST00000491383 SNAPC4Q5SXM2 1469 aa7.12□□□□□ -1.27
KDM3A-214ENST00000491383 NPM2Q86SE8 214 aaKnown RBP7.11□□□□□ -1.27
KDM3A-214ENST00000491383 PODXL2Q9NZ53 605 aa7.11□□□□□ -1.27
KDM3A-214ENST00000491383 CHMP7Q8WUX9 453 aaPredicted RBP7.1□□□□□ -1.27
KDM3A-214ENST00000491383 TSHZ2Q9NRE2 1034 aa7.1□□□□□ -1.27
KDM3A-214ENST00000491383 SYNJ2O15056 1496 aa7.1□□□□□ -1.27
KDM3A-214ENST00000491383 TRIM52Q96A61 297 aa7.09□□□□□ -1.27
KDM3A-214ENST00000491383 TULP1O00294 542 aaPredicted RBP7.08□□□□□ -1.28
KDM3A-214ENST00000491383 DEKP35659 375 aaKnown RBP7.08□□□□□ -1.28
KDM3A-214ENST00000491383 HNRNPUQ00839 825 aaKnown RBP eCLIP7.08□□□□□ -1.28
KDM3A-214ENST00000491383 DDX10Q13206 875 aaKnown RBP7.08□□□□□ -1.28
KDM3A-214ENST00000491383 RBM19Q9Y4C8 960 aaKnown RBP7.08□□□□□ -1.28
KDM3A-214ENST00000491383 FBLN2P98095 1184 aa7.08□□□□□ -1.28
KDM3A-214ENST00000491383 CEP162Q5TB80 1403 aa7.07□□□□□ -1.28
KDM3A-214ENST00000491383 GRIN2AQ12879 1464 aa7.07□□□□□ -1.28
KDM3A-214ENST00000491383 CTTNBP2Q8WZ74 1663 aa7.07□□□□□ -1.28
KDM3A-214ENST00000491383 CLIP1P30622 1438 aa7.06□□□□□ -1.28
KDM3A-214ENST00000491383 IRX6P78412 446 aaPredicted RBP7.04□□□□□ -1.28
KDM3A-214ENST00000491383 FAM50AQ14320 339 aaKnown RBP7.04□□□□□ -1.28
KDM3A-214ENST00000491383 KIAA0586Q9BVV6 1533 aa7.03□□□□□ -1.28
KDM3A-214ENST00000491383 IQGAP2Q13576 1575 aa7.03□□□□□ -1.28
KDM3A-214ENST00000491383 EFCAB5A4FU69 1503 aa7.03□□□□□ -1.28
KDM3A-214ENST00000491383 CCDC136Q96JN2 1154 aa7.03□□□□□ -1.28
KDM3A-214ENST00000491383 CHD1O14646 1710 aa7.02□□□□□ -1.29
KDM3A-214ENST00000491383 NOP58Q9Y2X3 529 aaKnown RBP7.02□□□□□ -1.29
KDM3A-214ENST00000491383 NUP160Q12769 1436 aa7.02□□□□□ -1.29
KDM3A-214ENST00000491383 CEP170Q5SW79 1584 aa7□□□□□ -1.29
KDM3A-214ENST00000491383 CARMIL2Q6F5E8 1435 aa7□□□□□ -1.29
KDM3A-214ENST00000491383 NEFMP07197 916 aa6.99□□□□□ -1.29
KDM3A-214ENST00000491383 UGGT2Q9NYU1 1516 aa6.99□□□□□ -1.29
KDM3A-214ENST00000491383 ARHGAP35Q9NRY4 1499 aa6.99□□□□□ -1.29
KDM3A-214ENST00000491383 ERICH6BQ5W0A0 696 aa6.99□□□□□ -1.29
KDM3A-214ENST00000491383 VPS8Q8N3P4 1428 aa6.98□□□□□ -1.29
KDM3A-214ENST00000491383 PPM1GO15355 546 aaPredicted RBP6.98□□□□□ -1.29
KDM3A-214ENST00000491383 FAM9BQ8IZU0 186 aa6.98□□□□□ -1.29
KDM3A-214ENST00000491383 SAMD9Q5K651 1589 aa6.97□□□□□ -1.29
KDM3A-214ENST00000491383 UBE2Q2Q8WVN8 375 aa6.97□□□□□ -1.29
KDM3A-214ENST00000491383 FMN1Q68DA7 1419 aa6.97□□□□□ -1.29
KDM3A-214ENST00000491383 JPH4Q96JJ6 628 aa6.97□□□□□ -1.29
KDM3A-214ENST00000491383 PPP4R2Q9NY27 417 aa6.97□□□□□ -1.29
KDM3A-214ENST00000491383 ARAP1Q96P48 1450 aa6.97□□□□□ -1.29
KDM3A-214ENST00000491383 OSCARQ8IYS5 282 aa6.97□□□□□ -1.29
KDM3A-214ENST00000491383 P3H3Q8IVL6 736 aa6.96□□□□□ -1.3
KDM3A-214ENST00000491383 ANO8Q9HCE9 1232 aaPredicted RBP6.96□□□□□ -1.3
KDM3A-214ENST00000491383 FHOD3Q2V2M9 1422 aa6.95□□□□□ -1.3
KDM3A-214ENST00000491383 KIAA0556O60303 1618 aa6.95□□□□□ -1.3
KDM3A-214ENST00000491383 ANP32BQ92688 251 aaKnown RBP6.95□□□□□ -1.3
KDM3A-214ENST00000491383 DDRGK1Q96HY6 314 aa6.95□□□□□ -1.3
KDM3A-214ENST00000491383 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.95□□□□□ -1.3
KDM3A-214ENST00000491383 CLASP1Q7Z460 1538 aa6.95□□□□□ -1.3
KDM3A-214ENST00000491383 PRG4Q92954 1404 aaPredicted RBP6.94□□□□□ -1.3
KDM3A-214ENST00000491383 KCNA4P22459 653 aa6.93□□□□□ -1.3
KDM3A-214ENST00000491383 SHROOM2Q13796 1616 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms