RNA–Protein interactions for RNA: ENST00000490543.5

SRRM1-217, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-217ENST00000490543 CCDC88BA6NC98 1476 aa17.01■□□□□ 0.31
SRRM1-217ENST00000490543 CYB5RLQ6IPT4 315 aa16.99■□□□□ 0.31
SRRM1-217ENST00000490543 TOPBP1Q92547 1522 aa16.99■□□□□ 0.31
SRRM1-217ENST00000490543 PRDM2Q13029 1718 aa16.99■□□□□ 0.31
SRRM1-217ENST00000490543 ZBTB12Q9Y330 459 aaPredicted RBP16.98■□□□□ 0.31
SRRM1-217ENST00000490543 EIF4G3O43432 1585 aaKnown RBP16.92■□□□□ 0.3
SRRM1-217ENST00000490543 AQRO60306 1485 aaKnown RBP eCLIP16.92■□□□□ 0.31e-15■■■■□ 19.6
SRRM1-217ENST00000490543 RBM42Q9BTD8 480 aaKnown RBP16.89■□□□□ 0.29
SRRM1-217ENST00000490543 FBLN2P98095 1184 aa16.88■□□□□ 0.29
SRRM1-217ENST00000490543 ABCC8Q09428 1581 aa16.88■□□□□ 0.29
SRRM1-217ENST00000490543 DNMBPQ6XZF7 1577 aa16.86■□□□□ 0.29
SRRM1-217ENST00000490543 ARAP1Q96P48 1450 aa16.86■□□□□ 0.29
SRRM1-217ENST00000490543 CHD1O14646 1710 aa16.85■□□□□ 0.29
SRRM1-217ENST00000490543 TARBP1Q13395 1621 aaKnown RBP16.85■□□□□ 0.29
SRRM1-217ENST00000490543 POLA1P09884 1462 aaPredicted RBP16.8■□□□□ 0.28
SRRM1-217ENST00000490543 RAD54L2Q9Y4B4 1467 aa16.79■□□□□ 0.28
SRRM1-217ENST00000490543 TDRD9Q8NDG6 1382 aaKnown RBP16.78■□□□□ 0.28
SRRM1-217ENST00000490543 SOGA1O94964 1423 aa16.73■□□□□ 0.27
SRRM1-217ENST00000490543 MKRN4PQ13434 485 aaPredicted RBP16.69■□□□□ 0.26
SRRM1-217ENST00000490543 SNAPC4Q5SXM2 1469 aa16.68■□□□□ 0.26
SRRM1-217ENST00000490543 CHMP7Q8WUX9 453 aaPredicted RBP16.68■□□□□ 0.26
SRRM1-217ENST00000490543 CLASP1Q7Z460 1538 aa16.66■□□□□ 0.26
SRRM1-217ENST00000490543 FGD5Q6ZNL6 1462 aa16.65■□□□□ 0.26
SRRM1-217ENST00000490543 CUX1P39880 1505 aa16.6■□□□□ 0.25
SRRM1-217ENST00000490543 MAGI1Q96QZ7 1491 aaPredicted RBP16.6■□□□□ 0.25
SRRM1-217ENST00000490543 SYNJ1O43426 1573 aa16.6■□□□□ 0.25
SRRM1-217ENST00000490543 AKT1S1Q96B36 256 aa16.59■□□□□ 0.25
SRRM1-217ENST00000490543 GRIN2BQ13224 1484 aa16.59■□□□□ 0.25
SRRM1-217ENST00000490543 SYNJ2O15056 1496 aa16.57■□□□□ 0.24
SRRM1-217ENST00000490543 WDR97A6NE52 1622 aa16.56■□□□□ 0.24
SRRM1-217ENST00000490543 GAPVD1Q14C86 1478 aa16.53■□□□□ 0.24
SRRM1-217ENST00000490543 SPDYE2BA6NHP3 402 aa16.5■□□□□ 0.23
SRRM1-217ENST00000490543 SPDYE6P0CI01 402 aa16.5■□□□□ 0.23
SRRM1-217ENST00000490543 SPDYE2Q495Y8 402 aa16.5■□□□□ 0.23
SRRM1-217ENST00000490543 PBRM1Q86U86 1689 aa16.46■□□□□ 0.23
SRRM1-217ENST00000490543 ERCC6L2Q5T890 1561 aa16.44■□□□□ 0.22
SRRM1-217ENST00000490543 REM2Q8IYK8 340 aaPredicted RBP16.44■□□□□ 0.22
SRRM1-217ENST00000490543 ABCA10Q8WWZ4 1543 aa16.43■□□□□ 0.22
SRRM1-217ENST00000490543 ABCA5Q8WWZ7 1642 aa16.41■□□□□ 0.22
SRRM1-217ENST00000490543 POTEHQ6S545 545 aa16.4■□□□□ 0.22
SRRM1-217ENST00000490543 CHRDL2Q6WN34 429 aa16.39■□□□□ 0.21
SRRM1-217ENST00000490543 GRIN2AQ12879 1464 aa16.38■□□□□ 0.21
SRRM1-217ENST00000490543 ZNF692Q9BU19 519 aaPredicted RBP16.37■□□□□ 0.21
SRRM1-217ENST00000490543 NUP160Q12769 1436 aa16.35■□□□□ 0.21
SRRM1-217ENST00000490543 CEP170Q5SW79 1584 aa16.34■□□□□ 0.21
SRRM1-217ENST00000490543 SSUH2Q9Y2M2 353 aa16.33■□□□□ 0.2
SRRM1-217ENST00000490543 WRNQ14191 1432 aaPredicted RBP eCLIP16.31■□□□□ 0.2
SRRM1-217ENST00000490543 ADAMTS12P58397 1594 aa16.3■□□□□ 0.2
SRRM1-217ENST00000490543 SUPT5HO00267 1087 aaKnown RBP16.28■□□□□ 0.2
SRRM1-217ENST00000490543 FHAD1B1AJZ9 1412 aa16.28■□□□□ 0.2
SRRM1-217ENST00000490543 SHROOM2Q13796 1616 aa16.27■□□□□ 0.2
SRRM1-217ENST00000490543 PITPNM1O00562 1244 aa16.27■□□□□ 0.2
SRRM1-217ENST00000490543 PRG4Q92954 1404 aaPredicted RBP16.23■□□□□ 0.19
SRRM1-217ENST00000490543 JPH4Q96JJ6 628 aa16.23■□□□□ 0.19
SRRM1-217ENST00000490543 KIF13AQ9H1H9 1805 aa16.23■□□□□ 0.19
SRRM1-217ENST00000490543 TOP2BQ02880 1626 aa16.21■□□□□ 0.19
SRRM1-217ENST00000490543 BIVM-ERCC5R4GMW8 1640 aa16.19■□□□□ 0.18
SRRM1-217ENST00000490543 ERICH3Q5RHP9 1530 aa16.19■□□□□ 0.18
SRRM1-217ENST00000490543 FAM69CQ0P6D2 419 aa16.18■□□□□ 0.18
SRRM1-217ENST00000490543 SPDYE1Q8NFV5 336 aaPredicted RBP16.13■□□□□ 0.17
SRRM1-217ENST00000490543 ABCC10Q5T3U5 1492 aa16.13■□□□□ 0.17
SRRM1-217ENST00000490543 NPM1P06748 294 aaKnown RBP eCLIP16.12■□□□□ 0.17
SRRM1-217ENST00000490543 PIP4P2Q8N4L2 257 aa16.09■□□□□ 0.17
SRRM1-217ENST00000490543 CLEC11AQ9Y240 323 aa16.09■□□□□ 0.17
SRRM1-217ENST00000490543 KDM4FA0A1W2PPD8 638 aa16.08■□□□□ 0.16
SRRM1-217ENST00000490543 RUSC2Q8N2Y8 1516 aa16.08■□□□□ 0.16
SRRM1-217ENST00000490543 SPDYE4A6NLX3 237 aa16.07■□□□□ 0.16
SRRM1-217ENST00000490543 ADCY10Q96PN6 1610 aa16.06■□□□□ 0.16
SRRM1-217ENST00000490543 MAPKBP1O60336 1514 aa16.06■□□□□ 0.16
SRRM1-217ENST00000490543 DIP2BQ9P265 1576 aa16.05■□□□□ 0.16
SRRM1-217ENST00000490543 FXR2P51116 673 aaKnown RBP eCLIP16.05■□□□□ 0.165e-6■■■□□ 14.9
SRRM1-217ENST00000490543 KIAA0586Q9BVV6 1533 aa16■□□□□ 0.15
SRRM1-217ENST00000490543 IGF1RP08069 1367 aa16■□□□□ 0.15
SRRM1-217ENST00000490543 KDM6BO15054 1643 aa15.99■□□□□ 0.15
SRRM1-217ENST00000490543 TSPOAP1O95153 1857 aa15.99■□□□□ 0.15
SRRM1-217ENST00000490543 TTBK1Q5TCY1 1321 aaPredicted RBP15.97■□□□□ 0.15
SRRM1-217ENST00000490543 PTPRGP23470 1445 aa15.94■□□□□ 0.14
SRRM1-217ENST00000490543 KIF27Q86VH2 1401 aa15.91■□□□□ 0.14
SRRM1-217ENST00000490543 ILDR1Q86SU0 546 aaPredicted RBP15.9■□□□□ 0.14
SRRM1-217ENST00000490543 PRR29P0C7W0 189 aa15.87■□□□□ 0.13
SRRM1-217ENST00000490543 CARMIL1Q5VZK9 1371 aa15.87■□□□□ 0.13
SRRM1-217ENST00000490543 ASXL2Q76L83 1435 aa15.86■□□□□ 0.13
SRRM1-217ENST00000490543 CUL7Q14999 1698 aa15.86■□□□□ 0.13
SRRM1-217ENST00000490543 ABCC2Q92887 1545 aa15.86■□□□□ 0.13
SRRM1-217ENST00000490543 TNIKQ9UKE5 1360 aa15.86■□□□□ 0.13
SRRM1-217ENST00000490543 PRKAR2AP13861 404 aaKnown RBP15.85■□□□□ 0.13
SRRM1-217ENST00000490543 PPRC1Q5VV67 1664 aaKnown RBP15.83■□□□□ 0.13
SRRM1-217ENST00000490543 CARMIL2Q6F5E8 1435 aa15.83■□□□□ 0.12
SRRM1-217ENST00000490543 PLB1Q6P1J6 1458 aa15.83■□□□□ 0.12
SRRM1-217ENST00000490543 COL17A1Q9UMD9 1497 aaPredicted RBP15.83■□□□□ 0.12
SRRM1-217ENST00000490543 GLI2P10070 1586 aa15.81■□□□□ 0.12
SRRM1-217ENST00000490543 ADGRL1O94910 1474 aa15.8■□□□□ 0.12
SRRM1-217ENST00000490543 UACAQ9BZF9 1416 aa15.79■□□□□ 0.12
SRRM1-217ENST00000490543 UHRF1BP1LA0JNW5 1464 aa15.78■□□□□ 0.12
SRRM1-217ENST00000490543 IQGAP2Q13576 1575 aa15.77■□□□□ 0.11
SRRM1-217ENST00000490543 DISP1Q96F81 1524 aa15.77■□□□□ 0.11
SRRM1-217ENST00000490543 EPRSP07814 1512 aaKnown RBP15.75■□□□□ 0.11
SRRM1-217ENST00000490543 CHADLQ6NUI6 762 aa15.75■□□□□ 0.11
SRRM1-217ENST00000490543 STAG3Q9UJ98 1225 aa15.75■□□□□ 0.11
SRRM1-217ENST00000490543 PROM2Q8N271 834 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms