RNA–Protein interactions for RNA: ENST00000489617.5

CDK18-211, Transcript of cyclin dependent kinase 18, humanhuman

TSL 1 (best)

Gene CDK18, Length 3,190 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK18-211ENST00000489617 ABCA10Q8WWZ4 1543 aa17.23■□□□□ 0.35
CDK18-211ENST00000489617 CARMIL1Q5VZK9 1371 aa17.23■□□□□ 0.35
CDK18-211ENST00000489617 ARID3CA6NKF2 412 aa17.2■□□□□ 0.34
CDK18-211ENST00000489617 SNAPC4Q5SXM2 1469 aa17.2■□□□□ 0.34
CDK18-211ENST00000489617 EIF5BO60841 1220 aaKnown RBP17.2■□□□□ 0.34
CDK18-211ENST00000489617 EIF4G3O43432 1585 aaKnown RBP17.19■□□□□ 0.34
CDK18-211ENST00000489617 YTHDC1Q96MU7 727 aaKnown RBP17.16■□□□□ 0.34
CDK18-211ENST00000489617 ATP1B4Q9UN42 357 aaPredicted RBP17.16■□□□□ 0.34
CDK18-211ENST00000489617 DIEXFQ68CQ4 756 aaKnown RBP17.15■□□□□ 0.34
CDK18-211ENST00000489617 GRIN2BQ13224 1484 aa17.11■□□□□ 0.33
CDK18-211ENST00000489617 TSHZ2Q9NRE2 1034 aa17.11■□□□□ 0.33
CDK18-211ENST00000489617 ABCA5Q8WWZ7 1642 aa17.07■□□□□ 0.32
CDK18-211ENST00000489617 WDR97A6NE52 1622 aa17.06■□□□□ 0.32
CDK18-211ENST00000489617 UBE2Q2Q8WVN8 375 aa17.05■□□□□ 0.32
CDK18-211ENST00000489617 PRXQ9BXM0 1461 aa17.03■□□□□ 0.32
CDK18-211ENST00000489617 EEA1Q15075 1411 aa17.03■□□□□ 0.32
CDK18-211ENST00000489617 GOLGA3Q08378 1498 aa17.02■□□□□ 0.32
CDK18-211ENST00000489617 PLEKHG5O94827 1062 aa17.02■□□□□ 0.32
CDK18-211ENST00000489617 DAXXQ9UER7 740 aaPredicted RBP17.01■□□□□ 0.31
CDK18-211ENST00000489617 PBRM1Q86U86 1689 aa17.01■□□□□ 0.31
CDK18-211ENST00000489617 CCDC136Q96JN2 1154 aa17■□□□□ 0.31
CDK18-211ENST00000489617 CCER1Q8TC90 406 aaPredicted RBP16.99■□□□□ 0.31
CDK18-211ENST00000489617 FHAD1B1AJZ9 1412 aa16.99■□□□□ 0.31
CDK18-211ENST00000489617 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.98■□□□□ 0.31
CDK18-211ENST00000489617 SALL2Q9Y467 1007 aaPredicted RBP16.98■□□□□ 0.31
CDK18-211ENST00000489617 CEP162Q5TB80 1403 aa16.96■□□□□ 0.31
CDK18-211ENST00000489617 ERICH3Q5RHP9 1530 aa16.95■□□□□ 0.3
CDK18-211ENST00000489617 GRIN2AQ12879 1464 aa16.95■□□□□ 0.3
CDK18-211ENST00000489617 OSCARQ8IYS5 282 aa16.94■□□□□ 0.3
CDK18-211ENST00000489617 ADAMTS12P58397 1594 aa16.93■□□□□ 0.3
CDK18-211ENST00000489617 SYNJ2O15056 1496 aa16.93■□□□□ 0.3
CDK18-211ENST00000489617 JPH4Q96JJ6 628 aa16.93■□□□□ 0.3
CDK18-211ENST00000489617 CLIP1P30622 1438 aa16.91■□□□□ 0.3
CDK18-211ENST00000489617 FHOD3Q2V2M9 1422 aa16.9■□□□□ 0.3
CDK18-211ENST00000489617 MAGI1Q96QZ7 1491 aaPredicted RBP16.9■□□□□ 0.3
CDK18-211ENST00000489617 TNIKQ9UKE5 1360 aa16.88■□□□□ 0.29
CDK18-211ENST00000489617 CHD1O14646 1710 aa16.88■□□□□ 0.29
CDK18-211ENST00000489617 HNRNPUL2Q1KMD3 747 aaKnown RBP16.88■□□□□ 0.29
CDK18-211ENST00000489617 CEP170Q5SW79 1584 aa16.86■□□□□ 0.29
CDK18-211ENST00000489617 KIF21BO75037 1637 aa16.86■□□□□ 0.29
CDK18-211ENST00000489617 SUPT16HQ9Y5B9 1047 aaKnown RBP16.85■□□□□ 0.29
CDK18-211ENST00000489617 CYB5RLQ6IPT4 315 aa16.83■□□□□ 0.28
CDK18-211ENST00000489617 CUL7Q14999 1698 aa16.82■□□□□ 0.28
CDK18-211ENST00000489617 ERCC6L2Q5T890 1561 aa16.8■□□□□ 0.28
CDK18-211ENST00000489617 PRG4Q92954 1404 aaPredicted RBP16.79■□□□□ 0.28
CDK18-211ENST00000489617 ARAP1Q96P48 1450 aa16.79■□□□□ 0.28
CDK18-211ENST00000489617 ARHGAP35Q9NRY4 1499 aa16.77■□□□□ 0.28
CDK18-211ENST00000489617 PKNOX2Q96KN3 472 aa16.74■□□□□ 0.27
CDK18-211ENST00000489617 NUP160Q12769 1436 aa16.73■□□□□ 0.27
CDK18-211ENST00000489617 KIAA0586Q9BVV6 1533 aa16.73■□□□□ 0.27
CDK18-211ENST00000489617 IQGAP2Q13576 1575 aa16.73■□□□□ 0.27
CDK18-211ENST00000489617 PODXL2Q9NZ53 605 aa16.71■□□□□ 0.27
CDK18-211ENST00000489617 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.71■□□□□ 0.27
CDK18-211ENST00000489617 KANK4Q5T7N3 995 aaPredicted RBP16.69■□□□□ 0.26
CDK18-211ENST00000489617 PLB1Q6P1J6 1458 aa16.67■□□□□ 0.26
CDK18-211ENST00000489617 KCNH8Q96L42 1107 aa16.66■□□□□ 0.26
CDK18-211ENST00000489617 DEKP35659 375 aaKnown RBP16.65■□□□□ 0.26
CDK18-211ENST00000489617 DISP1Q96F81 1524 aa16.65■□□□□ 0.26
CDK18-211ENST00000489617 CTTNBP2Q8WZ74 1663 aa16.64■□□□□ 0.26
CDK18-211ENST00000489617 PTPRGP23470 1445 aa16.63■□□□□ 0.25
CDK18-211ENST00000489617 MIER1Q8N108 512 aa16.62■□□□□ 0.25
CDK18-211ENST00000489617 CARMIL2Q6F5E8 1435 aa16.6■□□□□ 0.25
CDK18-211ENST00000489617 ITGAEP38570 1179 aa16.6■□□□□ 0.25
CDK18-211ENST00000489617 RBM19Q9Y4C8 960 aaKnown RBP16.6■□□□□ 0.25
CDK18-211ENST00000489617 MSH5O43196 834 aa16.59■□□□□ 0.25
CDK18-211ENST00000489617 ZNF316A6NFI3 1004 aaPredicted RBP16.59■□□□□ 0.25
CDK18-211ENST00000489617 VPS8Q8N3P4 1428 aa16.57■□□□□ 0.24
CDK18-211ENST00000489617 CDK13Q14004 1512 aaKnown RBP16.55■□□□□ 0.24
CDK18-211ENST00000489617 CLASP1Q7Z460 1538 aa16.55■□□□□ 0.24
CDK18-211ENST00000489617 ERICH6BQ5W0A0 696 aa16.54■□□□□ 0.24
CDK18-211ENST00000489617 KIAA0556O60303 1618 aa16.54■□□□□ 0.24
CDK18-211ENST00000489617 CLSPNQ9HAW4 1339 aa16.54■□□□□ 0.24
CDK18-211ENST00000489617 ARHGEF11O15085 1522 aa16.53■□□□□ 0.24
CDK18-211ENST00000489617 UGGT2Q9NYU1 1516 aa16.52■□□□□ 0.23
CDK18-211ENST00000489617 PCF11O94913 1555 aaKnown RBP16.51■□□□□ 0.23
CDK18-211ENST00000489617 ZNF777Q9ULD5 760 aaPredicted RBP16.49■□□□□ 0.23
CDK18-211ENST00000489617 RTN4Q9NQC3 1192 aaKnown RBP16.48■□□□□ 0.23
CDK18-211ENST00000489617 BCANQ96GW7 911 aa16.47■□□□□ 0.23
CDK18-211ENST00000489617 FMN1Q68DA7 1419 aa16.47■□□□□ 0.23
CDK18-211ENST00000489617 SAMD9Q5K651 1589 aa16.47■□□□□ 0.23
CDK18-211ENST00000489617 DNAJC5Q9H3Z4 198 aa16.45■□□□□ 0.22
CDK18-211ENST00000489617 MTUS2Q5JR59 1369 aa16.45■□□□□ 0.22
CDK18-211ENST00000489617 NPM1P06748 294 aaKnown RBP eCLIP16.44■□□□□ 0.22
CDK18-211ENST00000489617 MYT1LQ9UL68 1186 aa16.44■□□□□ 0.22
CDK18-211ENST00000489617 FAM50AQ14320 339 aaKnown RBP16.43■□□□□ 0.22
CDK18-211ENST00000489617 NUP153P49790 1475 aaKnown RBP16.43■□□□□ 0.22
CDK18-211ENST00000489617 EFCAB5A4FU69 1503 aa16.43■□□□□ 0.22
CDK18-211ENST00000489617 TRHP20396 242 aaPredicted RBP16.42■□□□□ 0.22
CDK18-211ENST00000489617 RIMBP3CA6NJZ7 1639 aa16.42■□□□□ 0.22
CDK18-211ENST00000489617 RIMBP3BA6NNM3 1639 aa16.42■□□□□ 0.22
CDK18-211ENST00000489617 RIMBP3Q9UFD9 1639 aa16.42■□□□□ 0.22
CDK18-211ENST00000489617 UACAQ9BZF9 1416 aa16.41■□□□□ 0.22
CDK18-211ENST00000489617 PLEKHD1A6NEE1 506 aa16.41■□□□□ 0.22
CDK18-211ENST00000489617 IL27Q8NEV9 243 aa16.4■□□□□ 0.22
CDK18-211ENST00000489617 CASKIN1Q8WXD9 1431 aa16.38■□□□□ 0.21
CDK18-211ENST00000489617 SHROOM2Q13796 1616 aa16.38■□□□□ 0.21
CDK18-211ENST00000489617 ZNF644Q9H582 1327 aaPredicted RBP16.38■□□□□ 0.21
CDK18-211ENST00000489617 EPRSP07814 1512 aaKnown RBP16.37■□□□□ 0.21
CDK18-211ENST00000489617 ATP10BO94823 1461 aa16.37■□□□□ 0.21
CDK18-211ENST00000489617 MAGI3Q5TCQ9 1506 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms