RNA–Protein interactions for RNA: ENST00000489617.5

CDK18-211, Transcript of cyclin dependent kinase 18, humanhuman

TSL 1 (best)

Gene CDK18, Length 3,190 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK18-211ENST00000489617 NISCHQ9Y2I1 1504 aa24.31■■□□□ 1.48
CDK18-211ENST00000489617 DCAF8L2P0C7V8 631 aa21.18■□□□□ 0.98
CDK18-211ENST00000489617 ABCC9O60706 1549 aa20.99■□□□□ 0.95
CDK18-211ENST00000489617 CCDC180Q9P1Z9 1646 aa20.96■□□□□ 0.95
CDK18-211ENST00000489617 SHROOM4Q9ULL8 1493 aa20.46■□□□□ 0.87
CDK18-211ENST00000489617 ZCCHC6Q5VYS8 1495 aaKnown RBP20.28■□□□□ 0.84
CDK18-211ENST00000489617 PELP1Q8IZL8 1130 aaKnown RBP20.27■□□□□ 0.84
CDK18-211ENST00000489617 PABPN1Q86U42 306 aaKnown RBP eCLIP19.99■□□□□ 0.791e-6■■□□□ 13.6
CDK18-211ENST00000489617 SCRIBQ14160 1630 aa19.88■□□□□ 0.77
CDK18-211ENST00000489617 MYT1Q01538 1121 aa19.79■□□□□ 0.76
CDK18-211ENST00000489617 RB1CC1Q8TDY2 1594 aa19.78■□□□□ 0.76
CDK18-211ENST00000489617 NACADO15069 1562 aa19.76■□□□□ 0.75
CDK18-211ENST00000489617 DCAF1Q9Y4B6 1507 aa19.68■□□□□ 0.74
CDK18-211ENST00000489617 SUPT5HO00267 1087 aaKnown RBP19.49■□□□□ 0.71
CDK18-211ENST00000489617 MYO15BQ96JP2 1530 aa19.49■□□□□ 0.71
CDK18-211ENST00000489617 UNC13AQ9UPW8 1703 aa19.4■□□□□ 0.7
CDK18-211ENST00000489617 BICRAQ9NZM4 1560 aa19.3■□□□□ 0.68
CDK18-211ENST00000489617 HRCP23327 699 aa19.26■□□□□ 0.67
CDK18-211ENST00000489617 CECR2Q9BXF3 1484 aa19.25■□□□□ 0.67
CDK18-211ENST00000489617 DNAJC5BQ9UF47 199 aa19.03■□□□□ 0.64
CDK18-211ENST00000489617 PPARGC1BQ86YN6 1023 aaKnown RBP18.99■□□□□ 0.63
CDK18-211ENST00000489617 SCAF1Q9H7N4 1312 aaKnown RBP18.97■□□□□ 0.63
CDK18-211ENST00000489617 MROH2BQ7Z745 1585 aa18.97■□□□□ 0.63
CDK18-211ENST00000489617 TTBK1Q5TCY1 1321 aaPredicted RBP18.9■□□□□ 0.62
CDK18-211ENST00000489617 RSF1Q96T23 1441 aaPredicted RBP18.89■□□□□ 0.61
CDK18-211ENST00000489617 PRKCSHP14314 528 aaPredicted RBP18.81■□□□□ 0.6
CDK18-211ENST00000489617 EIF4G1Q04637 1599 aaKnown RBP18.8■□□□□ 0.6
CDK18-211ENST00000489617 WIZO95785 1651 aa18.79■□□□□ 0.6
CDK18-211ENST00000489617 SMARCA4P51532 1647 aa18.73■□□□□ 0.59
CDK18-211ENST00000489617 BAZ1AQ9NRL2 1556 aaPredicted RBP18.72■□□□□ 0.59
CDK18-211ENST00000489617 CC2D2AQ9P2K1 1620 aa18.67■□□□□ 0.58
CDK18-211ENST00000489617 ATAD2BQ9ULI0 1458 aa18.62■□□□□ 0.57
CDK18-211ENST00000489617 BCL11AQ9H165 835 aa18.57■□□□□ 0.56
CDK18-211ENST00000489617 BAZ1BQ9UIG0 1483 aaKnown RBP18.55■□□□□ 0.56
CDK18-211ENST00000489617 PCGF6Q9BYE7 350 aa18.41■□□□□ 0.54
CDK18-211ENST00000489617 FAM9AQ8IZU1 332 aaPredicted RBP18.41■□□□□ 0.54
CDK18-211ENST00000489617 SMARCA2P51531 1590 aa18.4■□□□□ 0.54
CDK18-211ENST00000489617 CCDC88BA6NC98 1476 aa18.37■□□□□ 0.53
CDK18-211ENST00000489617 NCAPD3P42695 1498 aa18.37■□□□□ 0.53
CDK18-211ENST00000489617 TOP2AP11388 1531 aaKnown RBP18.33■□□□□ 0.52
CDK18-211ENST00000489617 CHIC1Q5VXU3 224 aa18.33■□□□□ 0.52
CDK18-211ENST00000489617 NESP48681 1621 aa18.3■□□□□ 0.52
CDK18-211ENST00000489617 EHMT2Q96KQ7 1210 aa18.28■□□□□ 0.52
CDK18-211ENST00000489617 PEG3Q9GZU2 1588 aa18.24■□□□□ 0.51
CDK18-211ENST00000489617 ERICH6Q7L0X2 663 aa18.19■□□□□ 0.5
CDK18-211ENST00000489617 HMGXB3Q12766 1538 aa18.18■□□□□ 0.5
CDK18-211ENST00000489617 APLP2Q06481 763 aa18.11■□□□□ 0.49
CDK18-211ENST00000489617 ABCC8Q09428 1581 aa18.07■□□□□ 0.48
CDK18-211ENST00000489617 ACIN1Q9UKV3 1341 aaKnown RBP18.07■□□□□ 0.48
CDK18-211ENST00000489617 CENPBP07199 599 aaPredicted RBP18.07■□□□□ 0.48
CDK18-211ENST00000489617 GTF3C3Q9Y5Q9 886 aa18.07■□□□□ 0.48
CDK18-211ENST00000489617 TRIM41Q8WV44 630 aa18.06■□□□□ 0.48
CDK18-211ENST00000489617 CADPSQ9ULU8 1353 aa18.05■□□□□ 0.48
CDK18-211ENST00000489617 NEUROD1Q13562 356 aa18.03■□□□□ 0.48
CDK18-211ENST00000489617 ERCC6Q03468 1493 aa17.94■□□□□ 0.46
CDK18-211ENST00000489617 CFTRP13569 1480 aa17.93■□□□□ 0.46
CDK18-211ENST00000489617 FANCD2Q9BXW9 1451 aa17.9■□□□□ 0.46
CDK18-211ENST00000489617 LOC105371045A0A1W2PR82 267 aa17.85■□□□□ 0.45
CDK18-211ENST00000489617 WRNQ14191 1432 aaPredicted RBP eCLIP17.81■□□□□ 0.44
CDK18-211ENST00000489617 PDS5BQ9NTI5 1447 aa17.79■□□□□ 0.44
CDK18-211ENST00000489617 CEP164Q9UPV0 1460 aa17.77■□□□□ 0.44
CDK18-211ENST00000489617 RANGAP1P46060 587 aaPredicted RBP17.77■□□□□ 0.43
CDK18-211ENST00000489617 KIF21AQ7Z4S6 1674 aa17.76■□□□□ 0.43
CDK18-211ENST00000489617 TRIM26Q12899 539 aaPredicted RBP17.73■□□□□ 0.43
CDK18-211ENST00000489617 SYNJ1O43426 1573 aa17.73■□□□□ 0.43
CDK18-211ENST00000489617 LAMC3Q9Y6N6 1575 aa17.73■□□□□ 0.43
CDK18-211ENST00000489617 ANP32EQ9BTT0 268 aa17.71■□□□□ 0.42
CDK18-211ENST00000489617 RAD54L2Q9Y4B4 1467 aa17.7■□□□□ 0.42
CDK18-211ENST00000489617 CUX1P39880 1505 aa17.7■□□□□ 0.42
CDK18-211ENST00000489617 URB2Q14146 1524 aaKnown RBP17.69■□□□□ 0.42
CDK18-211ENST00000489617 SOGA1O94964 1423 aa17.69■□□□□ 0.42
CDK18-211ENST00000489617 RUSC2Q8N2Y8 1516 aa17.69■□□□□ 0.42
CDK18-211ENST00000489617 TDRD9Q8NDG6 1382 aaKnown RBP17.66■□□□□ 0.42
CDK18-211ENST00000489617 ZEB1P37275 1124 aaPredicted RBP17.64■□□□□ 0.41
CDK18-211ENST00000489617 CSRNP3Q8WYN3 585 aa17.64■□□□□ 0.41
CDK18-211ENST00000489617 SLC24A1O60721 1099 aa17.62■□□□□ 0.41
CDK18-211ENST00000489617 FGD5Q6ZNL6 1462 aa17.61■□□□□ 0.41
CDK18-211ENST00000489617 TOPBP1Q92547 1522 aa17.61■□□□□ 0.41
CDK18-211ENST00000489617 FBLN2P98095 1184 aa17.6■□□□□ 0.41
CDK18-211ENST00000489617 MRC2Q9UBG0 1479 aa17.56■□□□□ 0.4
CDK18-211ENST00000489617 POLA1P09884 1462 aaPredicted RBP17.55■□□□□ 0.4
CDK18-211ENST00000489617 AQRO60306 1485 aaKnown RBP eCLIP17.54■□□□□ 0.41e-7■■■□□ 16.7
CDK18-211ENST00000489617 CUX2O14529 1486 aa17.52■□□□□ 0.4
CDK18-211ENST00000489617 ZNF608Q9ULD9 1512 aaPredicted RBP17.52■□□□□ 0.39
CDK18-211ENST00000489617 TOP2BQ02880 1626 aa17.47■□□□□ 0.39
CDK18-211ENST00000489617 UBTFP17480 764 aaKnown RBP17.46■□□□□ 0.39
CDK18-211ENST00000489617 DNMBPQ6XZF7 1577 aa17.46■□□□□ 0.39
CDK18-211ENST00000489617 PRDM2Q13029 1718 aa17.45■□□□□ 0.38
CDK18-211ENST00000489617 THOC2Q8NI27 1593 aaKnown RBP17.43■□□□□ 0.38
CDK18-211ENST00000489617 WDR62O43379 1518 aa17.36■□□□□ 0.37
CDK18-211ENST00000489617 ANO8Q9HCE9 1232 aaPredicted RBP17.36■□□□□ 0.37
CDK18-211ENST00000489617 BIVM-ERCC5R4GMW8 1640 aa17.34■□□□□ 0.37
CDK18-211ENST00000489617 KIF27Q86VH2 1401 aa17.33■□□□□ 0.36
CDK18-211ENST00000489617 P3H3Q8IVL6 736 aa17.32■□□□□ 0.36
CDK18-211ENST00000489617 IGF1RP08069 1367 aa17.29■□□□□ 0.36
CDK18-211ENST00000489617 GAPVD1Q14C86 1478 aa17.29■□□□□ 0.36
CDK18-211ENST00000489617 CHMP7Q8WUX9 453 aaPredicted RBP17.29■□□□□ 0.36
CDK18-211ENST00000489617 RAPGEF2Q9Y4G8 1499 aa17.25■□□□□ 0.35
CDK18-211ENST00000489617 IFT140Q96RY7 1462 aa17.24■□□□□ 0.35
CDK18-211ENST00000489617 TARBP1Q13395 1621 aaKnown RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms