RNA–Protein interactions for RNA: ENST00000489266.5

NSMCE4A-211, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

TSL 1 (best)

Gene NSMCE4A, Length 2,399 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-211ENST00000489266 MAPKBP1O60336 1514 aa29.62■■■□□ 2.33
NSMCE4A-211ENST00000489266 ANP32CO43423 234 aa29.61■■■□□ 2.33
NSMCE4A-211ENST00000489266 NBR1Q14596 966 aa29.6■■■□□ 2.33
NSMCE4A-211ENST00000489266 WDR97A6NE52 1622 aa29.59■■■□□ 2.33
NSMCE4A-211ENST00000489266 UBE2Q2Q8WVN8 375 aa29.57■■■□□ 2.32
NSMCE4A-211ENST00000489266 CCNB3Q8WWL7 1395 aa29.57■■■□□ 2.32
NSMCE4A-211ENST00000489266 IRX6P78412 446 aaPredicted RBP29.56■■■□□ 2.32
NSMCE4A-211ENST00000489266 ARAP1Q96P48 1450 aa29.56■■■□□ 2.32
NSMCE4A-211ENST00000489266 RANGAP1P46060 587 aaPredicted RBP29.54■■■□□ 2.32
NSMCE4A-211ENST00000489266 CCDC136Q96JN2 1154 aa29.53■■■□□ 2.32
NSMCE4A-211ENST00000489266 PPP4R2Q9NY27 417 aa29.52■■■□□ 2.32
NSMCE4A-211ENST00000489266 PAK3O75914 559 aaPredicted RBP29.5■■■□□ 2.31
NSMCE4A-211ENST00000489266 RAB3GAP2Q9H2M9 1393 aa29.49■■■□□ 2.31
NSMCE4A-211ENST00000489266 IL27Q8NEV9 243 aa29.45■■■□□ 2.31
NSMCE4A-211ENST00000489266 TIMELESSQ9UNS1 1208 aa29.45■■■□□ 2.31
NSMCE4A-211ENST00000489266 ERICH3Q5RHP9 1530 aa29.43■■■□□ 2.3
NSMCE4A-211ENST00000489266 RTL5Q5HYW3 569 aaPredicted RBP29.38■■■□□ 2.29
NSMCE4A-211ENST00000489266 HNRNPUQ00839 825 aaKnown RBP eCLIP29.37■■■□□ 2.29
NSMCE4A-211ENST00000489266 SETD5Q9C0A6 1442 aa29.33■■■□□ 2.29
NSMCE4A-211ENST00000489266 NCAPD3P42695 1498 aa29.33■■■□□ 2.29
NSMCE4A-211ENST00000489266 PRXQ9BXM0 1461 aa29.32■■■□□ 2.28
NSMCE4A-211ENST00000489266 SIN3AQ96ST3 1273 aa29.3■■■□□ 2.28
NSMCE4A-211ENST00000489266 ZBTB4Q9P1Z0 1013 aaPredicted RBP29.3■■■□□ 2.28
NSMCE4A-211ENST00000489266 HMGXB3Q12766 1538 aa29.29■■■□□ 2.28
NSMCE4A-211ENST00000489266 HIRIP3Q9BW71 556 aaPredicted RBP29.28■■■□□ 2.28
NSMCE4A-211ENST00000489266 RTN4Q9NQC3 1192 aaKnown RBP29.28■■■□□ 2.28
NSMCE4A-211ENST00000489266 B4GALNT3Q6L9W6 998 aa29.26■■■□□ 2.27
NSMCE4A-211ENST00000489266 IPO9Q96P70 1041 aaKnown RBP29.24■■■□□ 2.27
NSMCE4A-211ENST00000489266 TOP2BQ02880 1626 aa29.2■■■□□ 2.26
NSMCE4A-211ENST00000489266 WASHC2AQ641Q2 1341 aa29.19■■■□□ 2.26
NSMCE4A-211ENST00000489266 ANP32AP39687 249 aaKnown RBP29.17■■■□□ 2.26
NSMCE4A-211ENST00000489266 ZBTB47Q9UFB7 747 aaPredicted RBP29.15■■■□□ 2.26
NSMCE4A-211ENST00000489266 C11orf95C9JLR9 678 aaPredicted RBP29.1■■■□□ 2.25
NSMCE4A-211ENST00000489266 MAP3K1Q13233 1512 aa29.09■■■□□ 2.25
NSMCE4A-211ENST00000489266 ARHGAP35Q9NRY4 1499 aa29.08■■■□□ 2.25
NSMCE4A-211ENST00000489266 BIVM-ERCC5R4GMW8 1640 aa29.05■■■□□ 2.24
NSMCE4A-211ENST00000489266 WASHC2CQ9Y4E1 1318 aa29.02■■■□□ 2.24
NSMCE4A-211ENST00000489266 TIAM1Q13009 1591 aa29■■■□□ 2.23
NSMCE4A-211ENST00000489266 USP35Q9P2H5 1018 aa28.98■■■□□ 2.23
NSMCE4A-211ENST00000489266 CFTRP13569 1480 aa28.94■■■□□ 2.22
NSMCE4A-211ENST00000489266 PHLDB1Q86UU1 1377 aa28.91■■■□□ 2.22
NSMCE4A-211ENST00000489266 LRRC9Q6ZRR7 1453 aa28.91■■■□□ 2.22
NSMCE4A-211ENST00000489266 TONSLQ96HA7 1378 aa28.91■■■□□ 2.22
NSMCE4A-211ENST00000489266 ZBED9Q6R2W3 1325 aa28.9■■■□□ 2.22
NSMCE4A-211ENST00000489266 NEFMP07197 916 aa28.87■■■□□ 2.21
NSMCE4A-211ENST00000489266 FHAD1B1AJZ9 1412 aa28.86■■■□□ 2.21
NSMCE4A-211ENST00000489266 FAM50AQ14320 339 aaKnown RBP28.86■■■□□ 2.21
NSMCE4A-211ENST00000489266 KIF27Q86VH2 1401 aa28.84■■■□□ 2.21
NSMCE4A-211ENST00000489266 EIF5BO60841 1220 aaKnown RBP28.82■■■□□ 2.2
NSMCE4A-211ENST00000489266 CCDC184Q52MB2 194 aa28.81■■■□□ 2.2
NSMCE4A-211ENST00000489266 CUX1P39880 1505 aa28.81■■■□□ 2.2
NSMCE4A-211ENST00000489266 BRPF3Q9ULD4 1205 aa28.79■■■□□ 2.2
NSMCE4A-211ENST00000489266 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.77■■■□□ 2.2
NSMCE4A-211ENST00000489266 LAS1LQ9Y4W2 734 aaKnown RBP28.76■■■□□ 2.19
NSMCE4A-211ENST00000489266 PPM1GO15355 546 aaPredicted RBP28.72■■■□□ 2.19
NSMCE4A-211ENST00000489266 PKNOX2Q96KN3 472 aa28.72■■■□□ 2.19
NSMCE4A-211ENST00000489266 NCOA2Q15596 1464 aa28.72■■■□□ 2.19
NSMCE4A-211ENST00000489266 FAM9BQ8IZU0 186 aa28.71■■■□□ 2.19
NSMCE4A-211ENST00000489266 RNF123Q5XPI4 1314 aa28.7■■■□□ 2.19
NSMCE4A-211ENST00000489266 SMG6Q86US8 1419 aaKnown RBP28.69■■■□□ 2.18
NSMCE4A-211ENST00000489266 CNTLNQ9NXG0 1405 aa28.69■■■□□ 2.18
NSMCE4A-211ENST00000489266 PRDM2Q13029 1718 aa28.68■■■□□ 2.18
NSMCE4A-211ENST00000489266 CADPSQ9ULU8 1353 aa28.68■■■□□ 2.18
NSMCE4A-211ENST00000489266 AKNAQ7Z591 1439 aa28.68■■■□□ 2.18
NSMCE4A-211ENST00000489266 KDM5BQ9UGL1 1544 aa28.67■■■□□ 2.18
NSMCE4A-211ENST00000489266 CFAP43Q8NDM7 1665 aa28.67■■■□□ 2.18
NSMCE4A-211ENST00000489266 CC2D2AQ9P2K1 1620 aa28.66■■■□□ 2.18
NSMCE4A-211ENST00000489266 UACAQ9BZF9 1416 aa28.65■■■□□ 2.18
NSMCE4A-211ENST00000489266 GSE1Q14687 1217 aa28.64■■■□□ 2.18
NSMCE4A-211ENST00000489266 RSPH6AQ9H0K4 717 aa28.63■■■□□ 2.17
NSMCE4A-211ENST00000489266 MRS2Q9HD23 443 aa28.63■■■□□ 2.17
NSMCE4A-211ENST00000489266 PRKRIP1Q9H875 184 aaPredicted RBP28.62■■■□□ 2.17
NSMCE4A-211ENST00000489266 NPM2Q86SE8 214 aaKnown RBP28.62■■■□□ 2.17
NSMCE4A-211ENST00000489266 HSPA5P11021 654 aaKnown RBP28.61■■■□□ 2.17
NSMCE4A-211ENST00000489266 CCDC18Q5T9S5 1454 aa28.6■■■□□ 2.17
NSMCE4A-211ENST00000489266 NUDCQ9Y266 331 aa28.55■■■□□ 2.16
NSMCE4A-211ENST00000489266 HFM1A2PYH4 1435 aa28.53■■■□□ 2.16
NSMCE4A-211ENST00000489266 TCERG1O14776 1098 aaKnown RBP28.51■■■□□ 2.15
NSMCE4A-211ENST00000489266 EIF4G2P78344 907 aaKnown RBP eCLIP28.51■■■□□ 2.15
NSMCE4A-211ENST00000489266 PDE4AP27815 886 aa28.48■■■□□ 2.15
NSMCE4A-211ENST00000489266 PCF11O94913 1555 aaKnown RBP28.47■■■□□ 2.15
NSMCE4A-211ENST00000489266 FAM43AQ8N2R8 423 aa28.47■■■□□ 2.15
NSMCE4A-211ENST00000489266 PTPN23Q9H3S7 1636 aa28.46■■■□□ 2.15
NSMCE4A-211ENST00000489266 BACH2Q9BYV9 841 aa28.45■■■□□ 2.15
NSMCE4A-211ENST00000489266 FRAT1Q92837 279 aaPredicted RBP28.45■■■□□ 2.14
NSMCE4A-211ENST00000489266 NCOA1Q15788 1441 aa28.44■■■□□ 2.14
NSMCE4A-211ENST00000489266 IGF1RP08069 1367 aa28.43■■■□□ 2.14
NSMCE4A-211ENST00000489266 CCDC7Q96M83 1385 aa28.43■■■□□ 2.14
NSMCE4A-211ENST00000489266 FGD6Q6ZV73 1430 aa28.42■■■□□ 2.14
NSMCE4A-211ENST00000489266 NFKBIBQ15653 356 aa28.41■■■□□ 2.14
NSMCE4A-211ENST00000489266 MS4A1P11836 297 aa28.39■■■□□ 2.14
NSMCE4A-211ENST00000489266 NAIPQ13075 1403 aa28.37■■■□□ 2.13
NSMCE4A-211ENST00000489266 PTPRKQ15262 1439 aa28.37■■■□□ 2.13
NSMCE4A-211ENST00000489266 DDRGK1Q96HY6 314 aa28.37■■■□□ 2.13
NSMCE4A-211ENST00000489266 AQRO60306 1485 aaKnown RBP eCLIP28.36■■■□□ 2.135e-9■■□□□ 12.2
NSMCE4A-211ENST00000489266 FYCO1Q9BQS8 1478 aa28.36■■■□□ 2.13
NSMCE4A-211ENST00000489266 GLIPR1L2Q4G1C9 344 aa28.35■■■□□ 2.13
NSMCE4A-211ENST00000489266 FGD5Q6ZNL6 1462 aa28.34■■■□□ 2.13
NSMCE4A-211ENST00000489266 FANCD2Q9BXW9 1451 aa28.34■■■□□ 2.13
NSMCE4A-211ENST00000489266 FMN1Q68DA7 1419 aa28.32■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms