RNA–Protein interactions for RNA: ENST00000488144.5

LCLAT1-210, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 3

Gene LCLAT1, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-210ENST00000488144 SPATA31D1Q6ZQQ2 1576 aa13.17□□□□□ -0.3
LCLAT1-210ENST00000488144 FGD5Q6ZNL6 1462 aa13.14□□□□□ -0.31
LCLAT1-210ENST00000488144 NPM1P06748 294 aaKnown RBP eCLIP13.13□□□□□ -0.31
LCLAT1-210ENST00000488144 TOP2BQ02880 1626 aa13.13□□□□□ -0.31
LCLAT1-210ENST00000488144 GRIN2AQ12879 1464 aa13.12□□□□□ -0.31
LCLAT1-210ENST00000488144 CCDC88BA6NC98 1476 aa13.11□□□□□ -0.31
LCLAT1-210ENST00000488144 SENP3Q9H4L4 574 aaPredicted RBP13.11□□□□□ -0.31
LCLAT1-210ENST00000488144 NUP160Q12769 1436 aa13.11□□□□□ -0.31
LCLAT1-210ENST00000488144 ADCY10Q96PN6 1610 aa13.1□□□□□ -0.31
LCLAT1-210ENST00000488144 PPRC1Q5VV67 1664 aaKnown RBP13.09□□□□□ -0.31
LCLAT1-210ENST00000488144 PRG4Q92954 1404 aaPredicted RBP13.05□□□□□ -0.32
LCLAT1-210ENST00000488144 ABCA5Q8WWZ7 1642 aa13.04□□□□□ -0.32
LCLAT1-210ENST00000488144 COL17A1Q9UMD9 1497 aaPredicted RBP13.04□□□□□ -0.32
LCLAT1-210ENST00000488144 ADAMTS12P58397 1594 aa13.03□□□□□ -0.32
LCLAT1-210ENST00000488144 CERKQ8TCT0 537 aa12.99□□□□□ -0.33
LCLAT1-210ENST00000488144 CUX1P39880 1505 aa12.98□□□□□ -0.33
LCLAT1-210ENST00000488144 GLI2P10070 1586 aa12.96□□□□□ -0.33
LCLAT1-210ENST00000488144 PCF11O94913 1555 aaKnown RBP12.95□□□□□ -0.34
LCLAT1-210ENST00000488144 ABCA10Q8WWZ4 1543 aa12.92□□□□□ -0.34
LCLAT1-210ENST00000488144 JPH4Q96JJ6 628 aa12.91□□□□□ -0.34
LCLAT1-210ENST00000488144 KIF21BO75037 1637 aa12.91□□□□□ -0.34
LCLAT1-210ENST00000488144 PHF23Q9BUL5 403 aaPredicted RBP12.9□□□□□ -0.34
LCLAT1-210ENST00000488144 PTPRMP28827 1452 aa12.9□□□□□ -0.34
LCLAT1-210ENST00000488144 MAP3K4Q9Y6R4 1608 aa12.88□□□□□ -0.35
LCLAT1-210ENST00000488144 TEX14Q8IWB6 1497 aa12.88□□□□□ -0.35
LCLAT1-210ENST00000488144 RUSC2Q8N2Y8 1516 aa12.88□□□□□ -0.35
LCLAT1-210ENST00000488144 FHAD1B1AJZ9 1412 aa12.88□□□□□ -0.35
LCLAT1-210ENST00000488144 ASXL2Q76L83 1435 aa12.85□□□□□ -0.35
LCLAT1-210ENST00000488144 PLB1Q6P1J6 1458 aa12.85□□□□□ -0.35
LCLAT1-210ENST00000488144 ADAMTSL3P82987 1691 aa12.83□□□□□ -0.35
LCLAT1-210ENST00000488144 ABCC2Q92887 1545 aa12.8□□□□□ -0.36
LCLAT1-210ENST00000488144 CUL7Q14999 1698 aa12.8□□□□□ -0.36
LCLAT1-210ENST00000488144 EPRSP07814 1512 aaKnown RBP12.78□□□□□ -0.36
LCLAT1-210ENST00000488144 KIAA0586Q9BVV6 1533 aa12.77□□□□□ -0.37
LCLAT1-210ENST00000488144 HSPA2P54652 639 aa12.76□□□□□ -0.37
LCLAT1-210ENST00000488144 ERICH3Q5RHP9 1530 aa12.74□□□□□ -0.37
LCLAT1-210ENST00000488144 MADDQ8WXG6 1647 aa12.73□□□□□ -0.37
LCLAT1-210ENST00000488144 BCORL1Q5H9F3 1711 aa12.71□□□□□ -0.38
LCLAT1-210ENST00000488144 PTPRGP23470 1445 aa12.7□□□□□ -0.38
LCLAT1-210ENST00000488144 RIMS1Q86UR5 1692 aaKnown RBP12.67□□□□□ -0.38
LCLAT1-210ENST00000488144 UHRF1BP1LA0JNW5 1464 aa12.65□□□□□ -0.38
LCLAT1-210ENST00000488144 TTBK1Q5TCY1 1321 aaPredicted RBP12.64□□□□□ -0.39
LCLAT1-210ENST00000488144 WRNQ14191 1432 aaPredicted RBP eCLIP12.64□□□□□ -0.39
LCLAT1-210ENST00000488144 MAGI3Q5TCQ9 1506 aa12.63□□□□□ -0.39
LCLAT1-210ENST00000488144 ZCCHC11Q5TAX3 1644 aaKnown RBP12.62□□□□□ -0.39
LCLAT1-210ENST00000488144 CFAP43Q8NDM7 1665 aa12.61□□□□□ -0.39
LCLAT1-210ENST00000488144 KDM5BQ9UGL1 1544 aa12.61□□□□□ -0.39
LCLAT1-210ENST00000488144 MED1Q15648 1581 aaPredicted RBP12.6□□□□□ -0.39
LCLAT1-210ENST00000488144 TNIKQ9UKE5 1360 aa12.58□□□□□ -0.4
LCLAT1-210ENST00000488144 CD109Q6YHK3 1445 aa12.57□□□□□ -0.4
LCLAT1-210ENST00000488144 UACAQ9BZF9 1416 aa12.57□□□□□ -0.4
LCLAT1-210ENST00000488144 STRCQ7RTU9 1775 aa12.57□□□□□ -0.4
LCLAT1-210ENST00000488144 IQSEC2Q5JU85 1478 aa12.57□□□□□ -0.4
LCLAT1-210ENST00000488144 WDR7Q9Y4E6 1490 aa12.57□□□□□ -0.4
LCLAT1-210ENST00000488144 ARAP3Q8WWN8 1544 aa12.57□□□□□ -0.4
LCLAT1-210ENST00000488144 PLPPR3Q6T4P5 718 aa12.54□□□□□ -0.4
LCLAT1-210ENST00000488144 ARID4BQ4LE39 1312 aaPredicted RBP12.54□□□□□ -0.4
LCLAT1-210ENST00000488144 YEATS2Q9ULM3 1422 aa12.54□□□□□ -0.4
LCLAT1-210ENST00000488144 LTBP4Q8N2S1 1624 aa12.53□□□□□ -0.4
LCLAT1-210ENST00000488144 DMRT2Q9Y5R5 561 aa12.53□□□□□ -0.4
LCLAT1-210ENST00000488144 CARMIL2Q6F5E8 1435 aa12.53□□□□□ -0.4
LCLAT1-210ENST00000488144 BIVM-ERCC5R4GMW8 1640 aa12.51□□□□□ -0.41
LCLAT1-210ENST00000488144 PREX1Q8TCU6 1659 aa12.51□□□□□ -0.41
LCLAT1-210ENST00000488144 FRMPD1Q5SYB0 1578 aa12.45□□□□□ -0.42
LCLAT1-210ENST00000488144 PTPRTO14522 1441 aa12.45□□□□□ -0.42
LCLAT1-210ENST00000488144 TTC37Q6PGP7 1564 aa12.44□□□□□ -0.42
LCLAT1-210ENST00000488144 ARHGEF40Q8TER5 1519 aa12.44□□□□□ -0.42
LCLAT1-210ENST00000488144 FER1L4A9Z1Z3 1794 aa12.43□□□□□ -0.42
LCLAT1-210ENST00000488144 RAPGEF3O95398 923 aa12.42□□□□□ -0.42
LCLAT1-210ENST00000488144 UBAP1LF5GYI3 381 aa12.41□□□□□ -0.42
LCLAT1-210ENST00000488144 KCNH8Q96L42 1107 aa12.41□□□□□ -0.42
LCLAT1-210ENST00000488144 DISP1Q96F81 1524 aa12.4□□□□□ -0.42
LCLAT1-210ENST00000488144 PHLDB1Q86UU1 1377 aa12.39□□□□□ -0.43
LCLAT1-210ENST00000488144 IQGAP2Q13576 1575 aa12.39□□□□□ -0.43
LCLAT1-210ENST00000488144 POGZQ7Z3K3 1410 aa12.38□□□□□ -0.43
LCLAT1-210ENST00000488144 SIGLEC1Q9BZZ2 1709 aa12.38□□□□□ -0.43
LCLAT1-210ENST00000488144 FANCAO15360 1455 aa12.38□□□□□ -0.43
LCLAT1-210ENST00000488144 HSPA1LP34931 641 aa12.36□□□□□ -0.43
LCLAT1-210ENST00000488144 UHRF1BP1Q6BDS2 1440 aa12.34□□□□□ -0.43
LCLAT1-210ENST00000488144 NEO1Q92859 1461 aa12.33□□□□□ -0.44
LCLAT1-210ENST00000488144 ABCA9Q8IUA7 1624 aa12.31□□□□□ -0.44
LCLAT1-210ENST00000488144 RICTORQ6R327 1708 aa12.31□□□□□ -0.44
LCLAT1-210ENST00000488144 KIAA0556O60303 1618 aa12.3□□□□□ -0.44
LCLAT1-210ENST00000488144 AKNAQ7Z591 1439 aa12.29□□□□□ -0.44
LCLAT1-210ENST00000488144 MLECQ14165 292 aa12.29□□□□□ -0.44
LCLAT1-210ENST00000488144 IGF1RP08069 1367 aa12.29□□□□□ -0.44
LCLAT1-210ENST00000488144 ARHGEF12Q9NZN5 1544 aa12.28□□□□□ -0.44
LCLAT1-210ENST00000488144 SCAF1Q9H7N4 1312 aaKnown RBP12.27□□□□□ -0.45
LCLAT1-210ENST00000488144 SETD1BQ9UPS6 1966 aaKnown RBP12.27□□□□□ -0.45
LCLAT1-210ENST00000488144 UGGT2Q9NYU1 1516 aa12.27□□□□□ -0.45
LCLAT1-210ENST00000488144 SRCAPQ6ZRS2 3230 aa12.26□□□□□ -0.45
LCLAT1-210ENST00000488144 CEBPAP49715 358 aaPredicted RBP12.26□□□□□ -0.45
LCLAT1-210ENST00000488144 NCOA1Q15788 1441 aa12.26□□□□□ -0.45
LCLAT1-210ENST00000488144 ZNF335Q9H4Z2 1342 aaPredicted RBP12.25□□□□□ -0.45
LCLAT1-210ENST00000488144 ZFYVE16Q7Z3T8 1539 aa12.25□□□□□ -0.45
LCLAT1-210ENST00000488144 ABCA8O94911 1581 aa12.25□□□□□ -0.45
LCLAT1-210ENST00000488144 EFCAB5A4FU69 1503 aa12.24□□□□□ -0.45
LCLAT1-210ENST00000488144 ZMYM4Q5VZL5 1548 aa12.24□□□□□ -0.45
LCLAT1-210ENST00000488144 PIP4K2BP78356 416 aa12.23□□□□□ -0.45
LCLAT1-210ENST00000488144 DENND4BO75064 1496 aaPredicted RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms