RNA–Protein interactions for RNA: ENST00000486577.6

KCNT1-206, Transcript of potassium sodium-activated channel subfamily T member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNT1, Length 3,760 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNT1-206ENST00000486577 SIN3AQ96ST3 1273 aa23.21■■□□□ 1.31
KCNT1-206ENST00000486577 BIVM-ERCC5R4GMW8 1640 aa23.17■■□□□ 1.3
KCNT1-206ENST00000486577 MTUS2Q5JR59 1369 aa23.17■■□□□ 1.3
KCNT1-206ENST00000486577 TRIM52Q96A61 297 aa23.17■■□□□ 1.3
KCNT1-206ENST00000486577 ERICH3Q5RHP9 1530 aa23.14■■□□□ 1.3
KCNT1-206ENST00000486577 RRP7BPQ9NSQ0 103 aa23.09■■□□□ 1.29
KCNT1-206ENST00000486577 DHX57Q6P158 1386 aaKnown RBP23.08■■□□□ 1.29
KCNT1-206ENST00000486577 POLA1P09884 1462 aaPredicted RBP23.08■■□□□ 1.28
KCNT1-206ENST00000486577 RAB3GAP2Q9H2M9 1393 aa23.06■■□□□ 1.28
KCNT1-206ENST00000486577 PDS5BQ9NTI5 1447 aa23.05■■□□□ 1.28
KCNT1-206ENST00000486577 TOPBP1Q92547 1522 aa23.05■■□□□ 1.28
KCNT1-206ENST00000486577 CNGB1Q14028 1251 aaPredicted RBP23.05■■□□□ 1.28
KCNT1-206ENST00000486577 FHAD1B1AJZ9 1412 aa23.02■■□□□ 1.28
KCNT1-206ENST00000486577 PHLDB1Q86UU1 1377 aa23.02■■□□□ 1.28
KCNT1-206ENST00000486577 ZNF777Q9ULD5 760 aaPredicted RBP23.02■■□□□ 1.28
KCNT1-206ENST00000486577 DDX10Q13206 875 aaKnown RBP23.01■■□□□ 1.27
KCNT1-206ENST00000486577 CHMP7Q8WUX9 453 aaPredicted RBP22.96■■□□□ 1.27
KCNT1-206ENST00000486577 AQRO60306 1485 aaKnown RBP eCLIP22.95■■□□□ 1.26
KCNT1-206ENST00000486577 GAPVD1Q14C86 1478 aa22.92■■□□□ 1.26
KCNT1-206ENST00000486577 POLR3GLQ9BT43 218 aa22.89■■□□□ 1.26
KCNT1-206ENST00000486577 SETD5Q9C0A6 1442 aa22.89■■□□□ 1.26
KCNT1-206ENST00000486577 URB2Q14146 1524 aaKnown RBP22.88■■□□□ 1.25
KCNT1-206ENST00000486577 ERCC6Q03468 1493 aa22.87■■□□□ 1.25
KCNT1-206ENST00000486577 LRRC9Q6ZRR7 1453 aa22.86■■□□□ 1.25
KCNT1-206ENST00000486577 DNMBPQ6XZF7 1577 aa22.86■■□□□ 1.25
KCNT1-206ENST00000486577 RRBP1Q9P2E9 1410 aaKnown RBP22.84■■□□□ 1.25
KCNT1-206ENST00000486577 ZNF326Q5BKZ1 582 aaKnown RBP22.83■■□□□ 1.24
KCNT1-206ENST00000486577 TONSLQ96HA7 1378 aa22.82■■□□□ 1.24
KCNT1-206ENST00000486577 CLSPNQ9HAW4 1339 aa22.82■■□□□ 1.24
KCNT1-206ENST00000486577 FOXD1Q16676 465 aa22.81■■□□□ 1.24
KCNT1-206ENST00000486577 ABCA10Q8WWZ4 1543 aa22.81■■□□□ 1.24
KCNT1-206ENST00000486577 FMN1Q68DA7 1419 aa22.8■■□□□ 1.24
KCNT1-206ENST00000486577 KCNH8Q96L42 1107 aa22.76■■□□□ 1.23
KCNT1-206ENST00000486577 TIAM1Q13009 1591 aa22.75■■□□□ 1.23
KCNT1-206ENST00000486577 PCF11O94913 1555 aaKnown RBP22.72■■□□□ 1.23
KCNT1-206ENST00000486577 BCANQ96GW7 911 aa22.72■■□□□ 1.23
KCNT1-206ENST00000486577 CDK11AQ9UQ88 783 aaPredicted RBP22.7■■□□□ 1.22
KCNT1-206ENST00000486577 CASKIN1Q8WXD9 1431 aa22.67■■□□□ 1.22
KCNT1-206ENST00000486577 LAMC3Q9Y6N6 1575 aa22.64■■□□□ 1.22
KCNT1-206ENST00000486577 ZNF644Q9H582 1327 aaPredicted RBP22.64■■□□□ 1.22
KCNT1-206ENST00000486577 ANP32CO43423 234 aa22.64■■□□□ 1.22
KCNT1-206ENST00000486577 FGD6Q6ZV73 1430 aa22.62■■□□□ 1.21
KCNT1-206ENST00000486577 CFDP1Q9UEE9 299 aaPredicted RBP22.61■■□□□ 1.21
KCNT1-206ENST00000486577 SLC4A1APQ9BWU0 796 aaKnown RBP22.6■■□□□ 1.21
KCNT1-206ENST00000486577 ZNF608Q9ULD9 1512 aaPredicted RBP22.59■■□□□ 1.21
KCNT1-206ENST00000486577 PPP1R15AO75807 674 aaPredicted RBP22.59■■□□□ 1.21
KCNT1-206ENST00000486577 FYCO1Q9BQS8 1478 aa22.58■■□□□ 1.2
KCNT1-206ENST00000486577 PRDM2Q13029 1718 aa22.55■■□□□ 1.2
KCNT1-206ENST00000486577 NCOA2Q15596 1464 aa22.55■■□□□ 1.2
KCNT1-206ENST00000486577 MYT1LQ9UL68 1186 aa22.54■■□□□ 1.2
KCNT1-206ENST00000486577 JPH4Q96JJ6 628 aa22.53■■□□□ 1.2
KCNT1-206ENST00000486577 PLEKHD1A6NEE1 506 aa22.5■■□□□ 1.19
KCNT1-206ENST00000486577 MRC2Q9UBG0 1479 aa22.5■■□□□ 1.19
KCNT1-206ENST00000486577 KIF21AQ7Z4S6 1674 aa22.49■■□□□ 1.19
KCNT1-206ENST00000486577 CCDC18Q5T9S5 1454 aa22.49■■□□□ 1.19
KCNT1-206ENST00000486577 SENP3-EIF4A1A0A087X0R7 540 aa22.49■■□□□ 1.19
KCNT1-206ENST00000486577 EFCAB5A4FU69 1503 aa22.48■■□□□ 1.19
KCNT1-206ENST00000486577 MPHOSPH9Q99550 1183 aa22.48■■□□□ 1.19
KCNT1-206ENST00000486577 MYOM3Q5VTT5 1437 aa22.48■■□□□ 1.19
KCNT1-206ENST00000486577 CDK13Q14004 1512 aaKnown RBP22.47■■□□□ 1.19
KCNT1-206ENST00000486577 KDM2AQ9Y2K7 1162 aa22.47■■□□□ 1.19
KCNT1-206ENST00000486577 GRIN2BQ13224 1484 aa22.47■■□□□ 1.19
KCNT1-206ENST00000486577 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.47■■□□□ 1.19
KCNT1-206ENST00000486577 PTPRKQ15262 1439 aa22.45■■□□□ 1.18
KCNT1-206ENST00000486577 CUL7Q14999 1698 aa22.45■■□□□ 1.18
KCNT1-206ENST00000486577 NEFLP07196 543 aa22.45■■□□□ 1.18
KCNT1-206ENST00000486577 SNAPC4Q5SXM2 1469 aa22.42■■□□□ 1.18
KCNT1-206ENST00000486577 WDR97A6NE52 1622 aa22.4■■□□□ 1.18
KCNT1-206ENST00000486577 L3MBTL2Q969R5 705 aa22.4■■□□□ 1.18
KCNT1-206ENST00000486577 PELP1Q8IZL8 1130 aaKnown RBP22.4■■□□□ 1.18
KCNT1-206ENST00000486577 TSPY4P0CV99 314 aa22.39■■□□□ 1.17
KCNT1-206ENST00000486577 TSPY10P0CW01 314 aa22.39■■□□□ 1.17
KCNT1-206ENST00000486577 HSPA5P11021 654 aaKnown RBP22.38■■□□□ 1.17
KCNT1-206ENST00000486577 MAPKBP1O60336 1514 aa22.38■■□□□ 1.17
KCNT1-206ENST00000486577 MAP3K1Q13233 1512 aa22.38■■□□□ 1.17
KCNT1-206ENST00000486577 EIF4G2P78344 907 aaKnown RBP eCLIP22.37■■□□□ 1.17
KCNT1-206ENST00000486577 FKBP8Q14318 412 aa22.37■■□□□ 1.17
KCNT1-206ENST00000486577 HNRNPUQ00839 825 aaKnown RBP eCLIP22.36■■□□□ 1.17
KCNT1-206ENST00000486577 FAM9BQ8IZU0 186 aa22.35■■□□□ 1.17
KCNT1-206ENST00000486577 HNRNPMP52272 730 aaKnown RBP eCLIP22.34■■□□□ 1.17
KCNT1-206ENST00000486577 TIMELESSQ9UNS1 1208 aa22.32■■□□□ 1.16
KCNT1-206ENST00000486577 NAIPQ13075 1403 aa22.32■■□□□ 1.16
KCNT1-206ENST00000486577 PRG4Q92954 1404 aaPredicted RBP22.32■■□□□ 1.16
KCNT1-206ENST00000486577 EPRSP07814 1512 aaKnown RBP22.31■■□□□ 1.16
KCNT1-206ENST00000486577 RGL3Q3MIN7 710 aa22.31■■□□□ 1.16
KCNT1-206ENST00000486577 IFT140Q96RY7 1462 aa22.31■■□□□ 1.16
KCNT1-206ENST00000486577 CTTNBP2Q8WZ74 1663 aa22.31■■□□□ 1.16
KCNT1-206ENST00000486577 IQGAP2Q13576 1575 aa22.3■■□□□ 1.16
KCNT1-206ENST00000486577 IRX6P78412 446 aaPredicted RBP22.3■■□□□ 1.16
KCNT1-206ENST00000486577 PKD2Q13563 968 aa22.3■■□□□ 1.16
KCNT1-206ENST00000486577 UACAQ9BZF9 1416 aa22.29■■□□□ 1.16
KCNT1-206ENST00000486577 ABCA5Q8WWZ7 1642 aa22.27■■□□□ 1.16
KCNT1-206ENST00000486577 HFM1A2PYH4 1435 aa22.27■■□□□ 1.16
KCNT1-206ENST00000486577 CARMIL2Q6F5E8 1435 aa22.26■■□□□ 1.15
KCNT1-206ENST00000486577 SUPT16HQ9Y5B9 1047 aaKnown RBP22.25■■□□□ 1.15
KCNT1-206ENST00000486577 PLB1Q6P1J6 1458 aa22.25■■□□□ 1.15
KCNT1-206ENST00000486577 CFAP43Q8NDM7 1665 aa22.22■■□□□ 1.15
KCNT1-206ENST00000486577 EHBP1L1Q8N3D4 1523 aa22.21■■□□□ 1.15
KCNT1-206ENST00000486577 THOC2Q8NI27 1593 aaKnown RBP22.21■■□□□ 1.15
KCNT1-206ENST00000486577 TARBP1Q13395 1621 aaKnown RBP22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms