RNA–Protein interactions for RNA: ENST00000486577.6

KCNT1-206, Transcript of potassium sodium-activated channel subfamily T member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNT1, Length 3,760 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNT1-206ENST00000486577 NISCHQ9Y2I1 1504 aa32.4■■■□□ 2.78
KCNT1-206ENST00000486577 DCAF8L2P0C7V8 631 aa28.96■■■□□ 2.23
KCNT1-206ENST00000486577 SHROOM4Q9ULL8 1493 aa28.86■■■□□ 2.21
KCNT1-206ENST00000486577 SUPT5HO00267 1087 aaKnown RBP28.35■■■□□ 2.13
KCNT1-206ENST00000486577 ZCCHC6Q5VYS8 1495 aaKnown RBP27.17■■□□□ 1.94
KCNT1-206ENST00000486577 CCDC180Q9P1Z9 1646 aa27.05■■□□□ 1.92
KCNT1-206ENST00000486577 CHIC1Q5VXU3 224 aa26.7■■□□□ 1.86
KCNT1-206ENST00000486577 EHMT2Q96KQ7 1210 aa26.69■■□□□ 1.86
KCNT1-206ENST00000486577 ABCC9O60706 1549 aa26.68■■□□□ 1.86
KCNT1-206ENST00000486577 FAM9AQ8IZU1 332 aaPredicted RBP26.44■■□□□ 1.82
KCNT1-206ENST00000486577 LOC105371045A0A1W2PR82 267 aa26.36■■□□□ 1.81
KCNT1-206ENST00000486577 SCRIBQ14160 1630 aa26.27■■□□□ 1.8
KCNT1-206ENST00000486577 PCGF6Q9BYE7 350 aa26.21■■□□□ 1.79
KCNT1-206ENST00000486577 MYO15BQ96JP2 1530 aa26.13■■□□□ 1.77
KCNT1-206ENST00000486577 TRIM41Q8WV44 630 aa26.13■■□□□ 1.77
KCNT1-206ENST00000486577 DCAF1Q9Y4B6 1507 aa26■■□□□ 1.75
KCNT1-206ENST00000486577 PABPN1Q86U42 306 aaKnown RBP eCLIP25.92■■□□□ 1.74
KCNT1-206ENST00000486577 RSF1Q96T23 1441 aaPredicted RBP25.78■■□□□ 1.72
KCNT1-206ENST00000486577 PPARGC1BQ86YN6 1023 aaKnown RBP25.71■■□□□ 1.71
KCNT1-206ENST00000486577 CECR2Q9BXF3 1484 aa25.67■■□□□ 1.7
KCNT1-206ENST00000486577 TTBK1Q5TCY1 1321 aaPredicted RBP25.66■■□□□ 1.7
KCNT1-206ENST00000486577 NACADO15069 1562 aa25.47■■□□□ 1.67
KCNT1-206ENST00000486577 HRCP23327 699 aa25.44■■□□□ 1.66
KCNT1-206ENST00000486577 RB1CC1Q8TDY2 1594 aa25.39■■□□□ 1.66
KCNT1-206ENST00000486577 MROH2BQ7Z745 1585 aa25.36■■□□□ 1.65
KCNT1-206ENST00000486577 RANGAP1P46060 587 aaPredicted RBP25.34■■□□□ 1.65
KCNT1-206ENST00000486577 TRIM26Q12899 539 aaPredicted RBP25.28■■□□□ 1.64
KCNT1-206ENST00000486577 UBTFP17480 764 aaKnown RBP25.2■■□□□ 1.63
KCNT1-206ENST00000486577 WIZO95785 1651 aa25.15■■□□□ 1.62
KCNT1-206ENST00000486577 BAZ1AQ9NRL2 1556 aaPredicted RBP24.92■■□□□ 1.58
KCNT1-206ENST00000486577 ABCC8Q09428 1581 aa24.79■■□□□ 1.56
KCNT1-206ENST00000486577 CCER1Q8TC90 406 aaPredicted RBP24.79■■□□□ 1.56
KCNT1-206ENST00000486577 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.79■■□□□ 1.56
KCNT1-206ENST00000486577 CCDC88BA6NC98 1476 aa24.78■■□□□ 1.56
KCNT1-206ENST00000486577 CSRNP3Q8WYN3 585 aa24.73■■□□□ 1.55
KCNT1-206ENST00000486577 APLP2Q06481 763 aa24.67■■□□□ 1.54
KCNT1-206ENST00000486577 SOGA1O94964 1423 aa24.64■■□□□ 1.54
KCNT1-206ENST00000486577 SMARCA4P51532 1647 aa24.63■■□□□ 1.53
KCNT1-206ENST00000486577 ZEB1P37275 1124 aaPredicted RBP24.55■■□□□ 1.52
KCNT1-206ENST00000486577 TOP2AP11388 1531 aaKnown RBP24.55■■□□□ 1.52
KCNT1-206ENST00000486577 HNRNPUL2Q1KMD3 747 aaKnown RBP24.54■■□□□ 1.52
KCNT1-206ENST00000486577 BAZ1BQ9UIG0 1483 aaKnown RBP24.47■■□□□ 1.51
KCNT1-206ENST00000486577 RUSC2Q8N2Y8 1516 aa24.47■■□□□ 1.51
KCNT1-206ENST00000486577 WRNQ14191 1432 aaPredicted RBP eCLIP24.44■■□□□ 1.5
KCNT1-206ENST00000486577 SMARCA2P51531 1590 aa24.43■■□□□ 1.5
KCNT1-206ENST00000486577 UNC13AQ9UPW8 1703 aa24.4■■□□□ 1.5
KCNT1-206ENST00000486577 ATP1B4Q9UN42 357 aaPredicted RBP24.4■■□□□ 1.5
KCNT1-206ENST00000486577 CEP162Q5TB80 1403 aa24.36■■□□□ 1.49
KCNT1-206ENST00000486577 BICRAQ9NZM4 1560 aa24.35■■□□□ 1.49
KCNT1-206ENST00000486577 ATAD2BQ9ULI0 1458 aa24.32■■□□□ 1.48
KCNT1-206ENST00000486577 ITGAEP38570 1179 aa24.27■■□□□ 1.48
KCNT1-206ENST00000486577 TNIKQ9UKE5 1360 aa24.17■■□□□ 1.46
KCNT1-206ENST00000486577 P3H3Q8IVL6 736 aa24.12■■□□□ 1.45
KCNT1-206ENST00000486577 GOLGA3Q08378 1498 aa24.11■■□□□ 1.45
KCNT1-206ENST00000486577 CLIP1P30622 1438 aa24.09■■□□□ 1.45
KCNT1-206ENST00000486577 EEA1Q15075 1411 aa24.05■■□□□ 1.44
KCNT1-206ENST00000486577 EIF4G1Q04637 1599 aaKnown RBP23.96■■□□□ 1.43
KCNT1-206ENST00000486577 SYNJ1O43426 1573 aa23.95■■□□□ 1.43
KCNT1-206ENST00000486577 CEP164Q9UPV0 1460 aa23.95■■□□□ 1.42
KCNT1-206ENST00000486577 RAPGEF2Q9Y4G8 1499 aa23.94■■□□□ 1.42
KCNT1-206ENST00000486577 YTHDC1Q96MU7 727 aaKnown RBP23.92■■□□□ 1.42
KCNT1-206ENST00000486577 DIEXFQ68CQ4 756 aaKnown RBP23.88■■□□□ 1.41
KCNT1-206ENST00000486577 FAM50AQ14320 339 aaKnown RBP23.77■■□□□ 1.4
KCNT1-206ENST00000486577 KANK4Q5T7N3 995 aaPredicted RBP23.77■■□□□ 1.4
KCNT1-206ENST00000486577 KIF27Q86VH2 1401 aa23.76■■□□□ 1.39
KCNT1-206ENST00000486577 NCAPD3P42695 1498 aa23.72■■□□□ 1.39
KCNT1-206ENST00000486577 ARID3CA6NKF2 412 aa23.71■■□□□ 1.39
KCNT1-206ENST00000486577 CUX2O14529 1486 aa23.71■■□□□ 1.39
KCNT1-206ENST00000486577 PEG3Q9GZU2 1588 aa23.71■■□□□ 1.39
KCNT1-206ENST00000486577 VPS8Q8N3P4 1428 aa23.67■■□□□ 1.38
KCNT1-206ENST00000486577 DNAJC5BQ9UF47 199 aa23.66■■□□□ 1.38
KCNT1-206ENST00000486577 CADPSQ9ULU8 1353 aa23.63■■□□□ 1.37
KCNT1-206ENST00000486577 ZNF316A6NFI3 1004 aaPredicted RBP23.61■■□□□ 1.37
KCNT1-206ENST00000486577 CUX1P39880 1505 aa23.55■■□□□ 1.36
KCNT1-206ENST00000486577 CARMIL1Q5VZK9 1371 aa23.55■■□□□ 1.36
KCNT1-206ENST00000486577 NEUROD1Q13562 356 aa23.54■■□□□ 1.36
KCNT1-206ENST00000486577 CENPBP07199 599 aaPredicted RBP23.51■■□□□ 1.35
KCNT1-206ENST00000486577 CFTRP13569 1480 aa23.51■■□□□ 1.35
KCNT1-206ENST00000486577 TOP2BQ02880 1626 aa23.49■■□□□ 1.35
KCNT1-206ENST00000486577 NESP48681 1621 aa23.47■■□□□ 1.35
KCNT1-206ENST00000486577 KIF21BO75037 1637 aa23.45■■□□□ 1.34
KCNT1-206ENST00000486577 TDRD9Q8NDG6 1382 aaKnown RBP23.45■■□□□ 1.34
KCNT1-206ENST00000486577 IGF1RP08069 1367 aa23.44■■□□□ 1.34
KCNT1-206ENST00000486577 HMGXB3Q12766 1538 aa23.44■■□□□ 1.34
KCNT1-206ENST00000486577 RAD54L2Q9Y4B4 1467 aa23.42■■□□□ 1.34
KCNT1-206ENST00000486577 FBLN2P98095 1184 aa23.42■■□□□ 1.34
KCNT1-206ENST00000486577 FGD5Q6ZNL6 1462 aa23.41■■□□□ 1.34
KCNT1-206ENST00000486577 CC2D2AQ9P2K1 1620 aa23.41■■□□□ 1.34
KCNT1-206ENST00000486577 FANCD2Q9BXW9 1451 aa23.4■■□□□ 1.34
KCNT1-206ENST00000486577 SCAF1Q9H7N4 1312 aaKnown RBP23.38■■□□□ 1.33
KCNT1-206ENST00000486577 ARAP1Q96P48 1450 aa23.37■■□□□ 1.33
KCNT1-206ENST00000486577 PRXQ9BXM0 1461 aa23.36■■□□□ 1.33
KCNT1-206ENST00000486577 MIER1Q8N108 512 aa23.35■■□□□ 1.33
KCNT1-206ENST00000486577 GTF3C3Q9Y5Q9 886 aa23.3■■□□□ 1.32
KCNT1-206ENST00000486577 ACIN1Q9UKV3 1341 aaKnown RBP23.27■■□□□ 1.32
KCNT1-206ENST00000486577 FHOD3Q2V2M9 1422 aa23.26■■□□□ 1.31
KCNT1-206ENST00000486577 CCNB3Q8WWL7 1395 aa23.26■■□□□ 1.31
KCNT1-206ENST00000486577 HIRIP3Q9BW71 556 aaPredicted RBP23.25■■□□□ 1.31
KCNT1-206ENST00000486577 CHIC2Q9UKJ5 165 aa23.24■■□□□ 1.31
KCNT1-206ENST00000486577 ARHGAP35Q9NRY4 1499 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms