RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 OSCARQ8IYS5 282 aa25.89■■□□□ 1.74
APOE-205ENST00000485628 CTTNBP2Q8WZ74 1663 aa25.88■■□□□ 1.73
APOE-205ENST00000485628 TNIKQ9UKE5 1360 aa25.86■■□□□ 1.73
APOE-205ENST00000485628 UBTFP17480 764 aaKnown RBP25.8■■□□□ 1.72
APOE-205ENST00000485628 IQGAP2Q13576 1575 aa25.8■■□□□ 1.72
APOE-205ENST00000485628 SHROOM2Q13796 1616 aa25.79■■□□□ 1.72
APOE-205ENST00000485628 EHMT2Q96KQ7 1210 aa25.78■■□□□ 1.72
APOE-205ENST00000485628 UGGT2Q9NYU1 1516 aa25.76■■□□□ 1.71
APOE-205ENST00000485628 JPH4Q96JJ6 628 aa25.73■■□□□ 1.71
APOE-205ENST00000485628 DISP1Q96F81 1524 aa25.65■■□□□ 1.7
APOE-205ENST00000485628 SAMD9Q5K651 1589 aa25.65■■□□□ 1.7
APOE-205ENST00000485628 CEP162Q5TB80 1403 aa25.6■■□□□ 1.69
APOE-205ENST00000485628 PRG4Q92954 1404 aaPredicted RBP25.6■■□□□ 1.69
APOE-205ENST00000485628 EFCAB5A4FU69 1503 aa25.59■■□□□ 1.69
APOE-205ENST00000485628 ARHGAP35Q9NRY4 1499 aa25.59■■□□□ 1.69
APOE-205ENST00000485628 ERCC6L2Q5T890 1561 aa25.57■■□□□ 1.68
APOE-205ENST00000485628 KIAA0556O60303 1618 aa25.56■■□□□ 1.68
APOE-205ENST00000485628 CLIP1P30622 1438 aa25.54■■□□□ 1.68
APOE-205ENST00000485628 CARMIL2Q6F5E8 1435 aa25.53■■□□□ 1.68
APOE-205ENST00000485628 ARHGEF11O15085 1522 aa25.49■■□□□ 1.67
APOE-205ENST00000485628 ARAP1Q96P48 1450 aa25.47■■□□□ 1.67
APOE-205ENST00000485628 RANGAP1P46060 587 aaPredicted RBP25.44■■□□□ 1.66
APOE-205ENST00000485628 DNAJC5Q9H3Z4 198 aa25.43■■□□□ 1.66
APOE-205ENST00000485628 RIMBP3CA6NJZ7 1639 aa25.43■■□□□ 1.66
APOE-205ENST00000485628 RIMBP3BA6NNM3 1639 aa25.43■■□□□ 1.66
APOE-205ENST00000485628 RIMBP3Q9UFD9 1639 aa25.43■■□□□ 1.66
APOE-205ENST00000485628 FHOD3Q2V2M9 1422 aa25.43■■□□□ 1.66
APOE-205ENST00000485628 P3H3Q8IVL6 736 aa25.4■■□□□ 1.66
APOE-205ENST00000485628 PTPRGP23470 1445 aa25.37■■□□□ 1.65
APOE-205ENST00000485628 FMN1Q68DA7 1419 aa25.32■■□□□ 1.64
APOE-205ENST00000485628 ABCA8O94911 1581 aa25.31■■□□□ 1.64
APOE-205ENST00000485628 VPS8Q8N3P4 1428 aa25.27■■□□□ 1.64
APOE-205ENST00000485628 PLB1Q6P1J6 1458 aa25.26■■□□□ 1.63
APOE-205ENST00000485628 UHRF1BP1LA0JNW5 1464 aa25.25■■□□□ 1.63
APOE-205ENST00000485628 UACAQ9BZF9 1416 aa25.24■■□□□ 1.63
APOE-205ENST00000485628 CASKIN1Q8WXD9 1431 aa25.23■■□□□ 1.63
APOE-205ENST00000485628 RAPGEF6Q8TEU7 1601 aa25.22■■□□□ 1.63
APOE-205ENST00000485628 ABCC2Q92887 1545 aa25.19■■□□□ 1.62
APOE-205ENST00000485628 PCF11O94913 1555 aaKnown RBP25.18■■□□□ 1.62
APOE-205ENST00000485628 FYCO1Q9BQS8 1478 aa25.18■■□□□ 1.62
APOE-205ENST00000485628 ADCY10Q96PN6 1610 aa25.18■■□□□ 1.62
APOE-205ENST00000485628 NUP153P49790 1475 aaKnown RBP25.17■■□□□ 1.62
APOE-205ENST00000485628 CYB5RLQ6IPT4 315 aa25.16■■□□□ 1.62
APOE-205ENST00000485628 TTBK1Q5TCY1 1321 aaPredicted RBP25.14■■□□□ 1.62
APOE-205ENST00000485628 LRRIQ1Q96JM4 1722 aa25.13■■□□□ 1.61
APOE-205ENST00000485628 KDM5BQ9UGL1 1544 aa25.12■■□□□ 1.61
APOE-205ENST00000485628 HECW1Q76N89 1606 aa25.12■■□□□ 1.61
APOE-205ENST00000485628 ATP10BO94823 1461 aa25.09■■□□□ 1.61
APOE-205ENST00000485628 EPRSP07814 1512 aaKnown RBP25.08■■□□□ 1.61
APOE-205ENST00000485628 MAP3K1Q13233 1512 aa25.06■■□□□ 1.6
APOE-205ENST00000485628 CCDC18Q5T9S5 1454 aa25.02■■□□□ 1.6
APOE-205ENST00000485628 ZCCHC11Q5TAX3 1644 aaKnown RBP25.01■■□□□ 1.59
APOE-205ENST00000485628 CDK13Q14004 1512 aaKnown RBP25■■□□□ 1.59
APOE-205ENST00000485628 CFAP43Q8NDM7 1665 aa24.97■■□□□ 1.59
APOE-205ENST00000485628 TIAM1Q13009 1591 aa24.97■■□□□ 1.59
APOE-205ENST00000485628 ATP1B4Q9UN42 357 aaPredicted RBP24.93■■□□□ 1.58
APOE-205ENST00000485628 MAPKBP1O60336 1514 aa24.92■■□□□ 1.58
APOE-205ENST00000485628 MAGI3Q5TCQ9 1506 aa24.92■■□□□ 1.58
APOE-205ENST00000485628 ARID3CA6NKF2 412 aa24.89■■□□□ 1.58
APOE-205ENST00000485628 NPM1P06748 294 aaKnown RBP eCLIP24.87■■□□□ 1.57
APOE-205ENST00000485628 LRRC9Q6ZRR7 1453 aa24.87■■□□□ 1.57
APOE-205ENST00000485628 KANK4Q5T7N3 995 aaPredicted RBP24.86■■□□□ 1.57
APOE-205ENST00000485628 ASXL2Q76L83 1435 aa24.86■■□□□ 1.57
APOE-205ENST00000485628 TROQ12816 1431 aaPredicted RBP24.85■■□□□ 1.57
APOE-205ENST00000485628 CDK11AQ9UQ88 783 aaPredicted RBP24.83■■□□□ 1.57
APOE-205ENST00000485628 WDR7Q9Y4E6 1490 aa24.83■■□□□ 1.56
APOE-205ENST00000485628 PLEKHD1A6NEE1 506 aa24.82■■□□□ 1.56
APOE-205ENST00000485628 APLP2Q06481 763 aa24.8■■□□□ 1.56
APOE-205ENST00000485628 EHBP1L1Q8N3D4 1523 aa24.8■■□□□ 1.56
APOE-205ENST00000485628 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.79■■□□□ 1.56
APOE-205ENST00000485628 HNRNPUL2Q1KMD3 747 aaKnown RBP24.79■■□□□ 1.56
APOE-205ENST00000485628 MTUS2Q5JR59 1369 aa24.76■■□□□ 1.55
APOE-205ENST00000485628 ABCC10Q5T3U5 1492 aa24.73■■□□□ 1.55
APOE-205ENST00000485628 KIF14Q15058 1648 aa24.72■■□□□ 1.55
APOE-205ENST00000485628 GLI2P10070 1586 aa24.71■■□□□ 1.55
APOE-205ENST00000485628 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.69■■□□□ 1.54
APOE-205ENST00000485628 SUPT6HQ7KZ85 1726 aaKnown RBP24.69■■□□□ 1.54
APOE-205ENST00000485628 ABCA9Q8IUA7 1624 aa24.68■■□□□ 1.54
APOE-205ENST00000485628 DIP2BQ9P265 1576 aa24.68■■□□□ 1.54
APOE-205ENST00000485628 NCOA2Q15596 1464 aa24.67■■□□□ 1.54
APOE-205ENST00000485628 KCNH8Q96L42 1107 aa24.65■■□□□ 1.54
APOE-205ENST00000485628 TTC37Q6PGP7 1564 aa24.63■■□□□ 1.53
APOE-205ENST00000485628 KIF13AQ9H1H9 1805 aa24.63■■□□□ 1.53
APOE-205ENST00000485628 PPARGC1BQ86YN6 1023 aaKnown RBP24.6■■□□□ 1.53
APOE-205ENST00000485628 MAP3K4Q9Y6R4 1608 aa24.6■■□□□ 1.53
APOE-205ENST00000485628 GPATCH8Q9UKJ3 1502 aaKnown RBP24.59■■□□□ 1.53
APOE-205ENST00000485628 PHLDB1Q86UU1 1377 aa24.58■■□□□ 1.53
APOE-205ENST00000485628 CDC42BPAQ5VT25 1732 aa24.58■■□□□ 1.52
APOE-205ENST00000485628 ARAP3Q8WWN8 1544 aa24.57■■□□□ 1.52
APOE-205ENST00000485628 PLCH2O75038 1416 aa24.56■■□□□ 1.52
APOE-205ENST00000485628 FAM69CQ0P6D2 419 aa24.55■■□□□ 1.52
APOE-205ENST00000485628 CDC42BPBQ9Y5S2 1711 aa24.54■■□□□ 1.52
APOE-205ENST00000485628 PREX2Q70Z35 1606 aa24.53■■□□□ 1.52
APOE-205ENST00000485628 MYOM3Q5VTT5 1437 aa24.53■■□□□ 1.52
APOE-205ENST00000485628 CCNB3Q8WWL7 1395 aa24.53■■□□□ 1.52
APOE-205ENST00000485628 CD109Q6YHK3 1445 aa24.52■■□□□ 1.52
APOE-205ENST00000485628 MYO5CQ9NQX4 1742 aa24.52■■□□□ 1.52
APOE-205ENST00000485628 PPRC1Q5VV67 1664 aaKnown RBP24.5■■□□□ 1.51
APOE-205ENST00000485628 MIA2Q96PC5 1412 aa24.5■■□□□ 1.51
APOE-205ENST00000485628 ITSN2Q9NZM3 1697 aa24.5■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms