RNA–Protein interactions for RNA: ENST00000485596.5

PDE8A-205, Transcript of phosphodiesterase 8A, humanhuman

TSL 1 (best)

Gene PDE8A, Length 2,999 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE8A-205ENST00000485596 SETD5Q9C0A6 1442 aa24.36■■□□□ 1.49
PDE8A-205ENST00000485596 NEFLP07196 543 aa24.34■■□□□ 1.49
PDE8A-205ENST00000485596 MAPKBP1O60336 1514 aa24.34■■□□□ 1.49
PDE8A-205ENST00000485596 WDR97A6NE52 1622 aa24.34■■□□□ 1.49
PDE8A-205ENST00000485596 IGF1RP08069 1367 aa24.32■■□□□ 1.48
PDE8A-205ENST00000485596 ANP32EQ9BTT0 268 aa24.31■■□□□ 1.48
PDE8A-205ENST00000485596 ANP32CO43423 234 aa24.3■■□□□ 1.48
PDE8A-205ENST00000485596 CARMIL1Q5VZK9 1371 aa24.29■■□□□ 1.48
PDE8A-205ENST00000485596 IRX6P78412 446 aaPredicted RBP24.27■■□□□ 1.48
PDE8A-205ENST00000485596 PPP1R15AO75807 674 aaPredicted RBP24.26■■□□□ 1.47
PDE8A-205ENST00000485596 LRRC9Q6ZRR7 1453 aa24.19■■□□□ 1.46
PDE8A-205ENST00000485596 TIAM1Q13009 1591 aa24.17■■□□□ 1.46
PDE8A-205ENST00000485596 FHOD3Q2V2M9 1422 aa24.17■■□□□ 1.46
PDE8A-205ENST00000485596 RBM19Q9Y4C8 960 aaKnown RBP24.17■■□□□ 1.46
PDE8A-205ENST00000485596 CFTRP13569 1480 aa24.16■■□□□ 1.46
PDE8A-205ENST00000485596 NCAPD3P42695 1498 aa24.16■■□□□ 1.46
PDE8A-205ENST00000485596 TONSLQ96HA7 1378 aa24.14■■□□□ 1.45
PDE8A-205ENST00000485596 HNRNPUQ00839 825 aaKnown RBP eCLIP24.12■■□□□ 1.455e-7■□□□□ 9.2
PDE8A-205ENST00000485596 CNGB1Q14028 1251 aaPredicted RBP24.09■■□□□ 1.45
PDE8A-205ENST00000485596 CHIC2Q9UKJ5 165 aa24.08■■□□□ 1.45
PDE8A-205ENST00000485596 FGD5Q6ZNL6 1462 aa24.07■■□□□ 1.44
PDE8A-205ENST00000485596 ARID3CA6NKF2 412 aa24.05■■□□□ 1.44
PDE8A-205ENST00000485596 RRP7BPQ9NSQ0 103 aa24.02■■□□□ 1.44
PDE8A-205ENST00000485596 FHAD1B1AJZ9 1412 aa24.02■■□□□ 1.44
PDE8A-205ENST00000485596 CCER2I3L3R5 266 aa24.01■■□□□ 1.43
PDE8A-205ENST00000485596 HMGXB3Q12766 1538 aa24■■□□□ 1.43
PDE8A-205ENST00000485596 PCF11O94913 1555 aaKnown RBP23.99■■□□□ 1.43
PDE8A-205ENST00000485596 RAD54L2Q9Y4B4 1467 aa23.98■■□□□ 1.43
PDE8A-205ENST00000485596 MTUS2Q5JR59 1369 aa23.97■■□□□ 1.43
PDE8A-205ENST00000485596 CADPSQ9ULU8 1353 aa23.97■■□□□ 1.43
PDE8A-205ENST00000485596 TIMELESSQ9UNS1 1208 aa23.94■■□□□ 1.42
PDE8A-205ENST00000485596 SENP3-EIF4A1A0A087X0R7 540 aa23.93■■□□□ 1.42
PDE8A-205ENST00000485596 FOXD1Q16676 465 aa23.92■■□□□ 1.42
PDE8A-205ENST00000485596 FAM9BQ8IZU0 186 aa23.9■■□□□ 1.42
PDE8A-205ENST00000485596 CCDC184Q52MB2 194 aa23.9■■□□□ 1.42
PDE8A-205ENST00000485596 PTPRKQ15262 1439 aa23.89■■□□□ 1.42
PDE8A-205ENST00000485596 BCL11AQ9H165 835 aa23.89■■□□□ 1.41
PDE8A-205ENST00000485596 MSH5O43196 834 aa23.88■■□□□ 1.41
PDE8A-205ENST00000485596 CCDC18Q5T9S5 1454 aa23.88■■□□□ 1.41
PDE8A-205ENST00000485596 HSPA5P11021 654 aaKnown RBP23.88■■□□□ 1.41
PDE8A-205ENST00000485596 MAP3K1Q13233 1512 aa23.87■■□□□ 1.41
PDE8A-205ENST00000485596 FGD6Q6ZV73 1430 aa23.85■■□□□ 1.41
PDE8A-205ENST00000485596 CDK11AQ9UQ88 783 aaPredicted RBP23.83■■□□□ 1.41
PDE8A-205ENST00000485596 POLR3GLQ9BT43 218 aa23.82■■□□□ 1.4
PDE8A-205ENST00000485596 WASHC2AQ641Q2 1341 aa23.81■■□□□ 1.4
PDE8A-205ENST00000485596 ERICH6Q7L0X2 663 aa23.81■■□□□ 1.4
PDE8A-205ENST00000485596 AQRO60306 1485 aaKnown RBP eCLIP23.81■■□□□ 1.47e-9■■■■■ 35.6
PDE8A-205ENST00000485596 TDRD9Q8NDG6 1382 aaKnown RBP23.79■■□□□ 1.4
PDE8A-205ENST00000485596 FANCD2Q9BXW9 1451 aa23.78■■□□□ 1.4
PDE8A-205ENST00000485596 CASKIN1Q8WXD9 1431 aa23.77■■□□□ 1.4
PDE8A-205ENST00000485596 B4GALNT3Q6L9W6 998 aa23.76■■□□□ 1.39
PDE8A-205ENST00000485596 UACAQ9BZF9 1416 aa23.74■■□□□ 1.39
PDE8A-205ENST00000485596 FYCO1Q9BQS8 1478 aa23.74■■□□□ 1.39
PDE8A-205ENST00000485596 C11orf95C9JLR9 678 aaPredicted RBP23.73■■□□□ 1.39
PDE8A-205ENST00000485596 CFAP43Q8NDM7 1665 aa23.73■■□□□ 1.39
PDE8A-205ENST00000485596 EIF4G2P78344 907 aaKnown RBP eCLIP23.73■■□□□ 1.392e-9■■□□□ 12.5
PDE8A-205ENST00000485596 MRS2Q9HD23 443 aa23.72■■□□□ 1.39
PDE8A-205ENST00000485596 NESP48681 1621 aa23.72■■□□□ 1.39
PDE8A-205ENST00000485596 NAIPQ13075 1403 aa23.71■■□□□ 1.39
PDE8A-205ENST00000485596 L3MBTL2Q969R5 705 aa23.7■■□□□ 1.39
PDE8A-205ENST00000485596 HFM1A2PYH4 1435 aa23.69■■□□□ 1.38
PDE8A-205ENST00000485596 FMN1Q68DA7 1419 aa23.68■■□□□ 1.38
PDE8A-205ENST00000485596 POLA1P09884 1462 aaPredicted RBP23.67■■□□□ 1.38
PDE8A-205ENST00000485596 NCOA2Q15596 1464 aa23.67■■□□□ 1.38
PDE8A-205ENST00000485596 ZNF326Q5BKZ1 582 aaKnown RBP23.66■■□□□ 1.38
PDE8A-205ENST00000485596 MPHOSPH9Q99550 1183 aa23.64■■□□□ 1.37
PDE8A-205ENST00000485596 PTPN23Q9H3S7 1636 aa23.63■■□□□ 1.37
PDE8A-205ENST00000485596 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.61■■□□□ 1.37
PDE8A-205ENST00000485596 MYOM3Q5VTT5 1437 aa23.61■■□□□ 1.37
PDE8A-205ENST00000485596 PRKRIP1Q9H875 184 aaPredicted RBP23.59■■□□□ 1.37
PDE8A-205ENST00000485596 TOPBP1Q92547 1522 aa23.59■■□□□ 1.37
PDE8A-205ENST00000485596 PPP4R2Q9NY27 417 aa23.58■■□□□ 1.36
PDE8A-205ENST00000485596 NBPF8Q3BBV2 869 aa23.57■■□□□ 1.36
PDE8A-205ENST00000485596 SNAPC4Q5SXM2 1469 aa23.57■■□□□ 1.36
PDE8A-205ENST00000485596 EFCAB5A4FU69 1503 aa23.55■■□□□ 1.36
PDE8A-205ENST00000485596 ABCA10Q8WWZ4 1543 aa23.55■■□□□ 1.36
PDE8A-205ENST00000485596 PRDM2Q13029 1718 aa23.53■■□□□ 1.36
PDE8A-205ENST00000485596 DNAJC5BQ9UF47 199 aa23.51■■□□□ 1.35
PDE8A-205ENST00000485596 SLC4A1APQ9BWU0 796 aaKnown RBP23.5■■□□□ 1.35
PDE8A-205ENST00000485596 ZNF644Q9H582 1327 aaPredicted RBP23.5■■□□□ 1.35
PDE8A-205ENST00000485596 KDM5BQ9UGL1 1544 aa23.49■■□□□ 1.35
PDE8A-205ENST00000485596 NBR1Q14596 966 aa23.49■■□□□ 1.35
PDE8A-205ENST00000485596 FANCIQ9NVI1 1328 aa23.49■■□□□ 1.35
PDE8A-205ENST00000485596 CC2D2AQ9P2K1 1620 aa23.48■■□□□ 1.35
PDE8A-205ENST00000485596 DNMBPQ6XZF7 1577 aa23.47■■□□□ 1.35
PDE8A-205ENST00000485596 CCDC7Q96M83 1385 aa23.47■■□□□ 1.35
PDE8A-205ENST00000485596 CNTLNQ9NXG0 1405 aa23.47■■□□□ 1.35
PDE8A-205ENST00000485596 KDM6BO15054 1643 aa23.45■■□□□ 1.34
PDE8A-205ENST00000485596 KIF7Q2M1P5 1343 aa23.44■■□□□ 1.34
PDE8A-205ENST00000485596 DENND4BO75064 1496 aaPredicted RBP23.44■■□□□ 1.34
PDE8A-205ENST00000485596 ZNF777Q9ULD5 760 aaPredicted RBP23.43■■□□□ 1.34
PDE8A-205ENST00000485596 MAGI3Q5TCQ9 1506 aa23.43■■□□□ 1.34
PDE8A-205ENST00000485596 CTTNBP2Q8WZ74 1663 aa23.42■■□□□ 1.34
PDE8A-205ENST00000485596 SALL2Q9Y467 1007 aaPredicted RBP23.42■■□□□ 1.34
PDE8A-205ENST00000485596 LRRIQ1Q96JM4 1722 aa23.41■■□□□ 1.34
PDE8A-205ENST00000485596 GRIN2BQ13224 1484 aa23.41■■□□□ 1.34
PDE8A-205ENST00000485596 GAPVD1Q14C86 1478 aa23.41■■□□□ 1.34
PDE8A-205ENST00000485596 SUPT6HQ7KZ85 1726 aaKnown RBP23.38■■□□□ 1.33
PDE8A-205ENST00000485596 AKNAQ7Z591 1439 aa23.38■■□□□ 1.33
PDE8A-205ENST00000485596 ZBED9Q6R2W3 1325 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms