RNA–Protein interactions for RNA: ENST00000485441.5

SRRM1-213, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-213ENST00000485441 CHGAP10645 457 aaKnown RBP12.33□□□□□ -0.44
SRRM1-213ENST00000485441 RASEFQ8IZ41 740 aa12.31□□□□□ -0.44
SRRM1-213ENST00000485441 DNAJC5Q9H3Z4 198 aa12.31□□□□□ -0.44
SRRM1-213ENST00000485441 CHRM1P11229 460 aaPredicted RBP12.3□□□□□ -0.44
SRRM1-213ENST00000485441 HS6ST3Q8IZP7 471 aa12.3□□□□□ -0.44
SRRM1-213ENST00000485441 SPRYD3Q8NCJ5 442 aa12.28□□□□□ -0.44
SRRM1-213ENST00000485441 FAM212AQ96EL1 285 aa12.28□□□□□ -0.44
SRRM1-213ENST00000485441 CFAP44Q96MT7 982 aa12.28□□□□□ -0.44
SRRM1-213ENST00000485441 KDM2AQ9Y2K7 1162 aa12.27□□□□□ -0.45
SRRM1-213ENST00000485441 RIOK3O14730 519 aaKnown RBP12.24□□□□□ -0.45
SRRM1-213ENST00000485441 TSHZ2Q9NRE2 1034 aa12.2□□□□□ -0.46
SRRM1-213ENST00000485441 SGIP1Q9BQI5 828 aa12.19□□□□□ -0.46
SRRM1-213ENST00000485441 CHADLQ6NUI6 762 aa12.18□□□□□ -0.46
SRRM1-213ENST00000485441 NKX1-1Q15270 411 aaPredicted RBP12.17□□□□□ -0.46
SRRM1-213ENST00000485441 VGFO15240 615 aaPredicted RBP12.16□□□□□ -0.46
SRRM1-213ENST00000485441 TAOK2Q9UL54 1235 aa12.16□□□□□ -0.46
SRRM1-213ENST00000485441 PYGBP11216 843 aa12.13□□□□□ -0.47
SRRM1-213ENST00000485441 FARP1Q9Y4F1 1045 aaPredicted RBP12.13□□□□□ -0.47
SRRM1-213ENST00000485441 FXR2P51116 673 aaKnown RBP eCLIP12.11□□□□□ -0.475e-6■■■□□ 14.9
SRRM1-213ENST00000485441 GTPBP6O43824 516 aaPredicted RBP12.1□□□□□ -0.47
SRRM1-213ENST00000485441 STK25O00506 426 aa12.08□□□□□ -0.48
SRRM1-213ENST00000485441 BCANQ96GW7 911 aa12.08□□□□□ -0.48
SRRM1-213ENST00000485441 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.07□□□□□ -0.48
SRRM1-213ENST00000485441 ZFP91Q96JP5 570 aaPredicted RBP12.07□□□□□ -0.48
SRRM1-213ENST00000485441 PRKAR2AP13861 404 aaKnown RBP12.06□□□□□ -0.48
SRRM1-213ENST00000485441 TSPYL2Q9H2G4 693 aaPredicted RBP12.05□□□□□ -0.48
SRRM1-213ENST00000485441 BCL11BQ9C0K0 894 aaPredicted RBP12.03□□□□□ -0.48
SRRM1-213ENST00000485441 CCDC61Q9Y6R9 512 aa12.01□□□□□ -0.49
SRRM1-213ENST00000485441 STK24Q9Y6E0 443 aa12□□□□□ -0.49
SRRM1-213ENST00000485441 CHRDL2Q6WN34 429 aa11.96□□□□□ -0.49
SRRM1-213ENST00000485441 ZNF467Q7Z7K2 595 aaPredicted RBP11.96□□□□□ -0.49
SRRM1-213ENST00000485441 PIP4P2Q8N4L2 257 aa11.96□□□□□ -0.49
SRRM1-213ENST00000485441 PCDHB8Q9UN66 801 aa11.93□□□□□ -0.5
SRRM1-213ENST00000485441 PCDHB13Q9Y5F0 798 aa11.93□□□□□ -0.5
SRRM1-213ENST00000485441 PDAP1Q13442 181 aaKnown RBP11.91□□□□□ -0.5
SRRM1-213ENST00000485441 ZNF579Q8NAF0 562 aaKnown RBP11.91□□□□□ -0.5
SRRM1-213ENST00000485441 RYDENQ9NUL5 291 aaKnown RBP11.88□□□□□ -0.51
SRRM1-213ENST00000485441 KIF12Q96FN5 646 aa11.86□□□□□ -0.51
SRRM1-213ENST00000485441 PSEN1P49768 467 aa11.85□□□□□ -0.51
SRRM1-213ENST00000485441 PRKCSHP14314 528 aaPredicted RBP11.84□□□□□ -0.51
SRRM1-213ENST00000485441 IFNL1Q8IU54 200 aa11.84□□□□□ -0.51
SRRM1-213ENST00000485441 MAP3K13O43283 966 aa11.83□□□□□ -0.52
SRRM1-213ENST00000485441 PAK3O75914 559 aaPredicted RBP11.81□□□□□ -0.52
SRRM1-213ENST00000485441 MFRPQ9BY79 579 aa11.79□□□□□ -0.52
SRRM1-213ENST00000485441 CADPS2Q86UW7 1296 aa11.74□□□□□ -0.53
SRRM1-213ENST00000485441 ZRANB1Q9UGI0 708 aa11.74□□□□□ -0.53
SRRM1-213ENST00000485441 CD44P16070 742 aaKnown RBP11.72□□□□□ -0.53
SRRM1-213ENST00000485441 FBXO22Q8NEZ5 403 aa11.72□□□□□ -0.53
SRRM1-213ENST00000485441 EFCAB3Q8N7B9 438 aa11.71□□□□□ -0.53
SRRM1-213ENST00000485441 TPRNQ4KMQ1 711 aa11.7□□□□□ -0.54
SRRM1-213ENST00000485441 PHF12Q96QT6 1004 aa11.7□□□□□ -0.54
SRRM1-213ENST00000485441 SOX12O15370 315 aa11.69□□□□□ -0.54
SRRM1-213ENST00000485441 PPP1R37O75864 691 aa11.69□□□□□ -0.54
SRRM1-213ENST00000485441 C19orf67A6NJJ6 358 aa11.67□□□□□ -0.54
SRRM1-213ENST00000485441 NBR1Q14596 966 aa11.67□□□□□ -0.54
SRRM1-213ENST00000485441 CABP2Q9NPB3 220 aa11.67□□□□□ -0.54
SRRM1-213ENST00000485441 NLRP6P59044 892 aa11.65□□□□□ -0.54
SRRM1-213ENST00000485441 PHF8Q9UPP1 1060 aa11.65□□□□□ -0.54
SRRM1-213ENST00000485441 TRPC6Q9Y210 931 aa11.62□□□□□ -0.55
SRRM1-213ENST00000485441 POTEHQ6S545 545 aa11.61□□□□□ -0.55
SRRM1-213ENST00000485441 MS4A3Q96HJ5 214 aa11.59□□□□□ -0.55
SRRM1-213ENST00000485441 MS4A4AQ96JQ5 239 aa11.59□□□□□ -0.55
SRRM1-213ENST00000485441 TMEM106CQ9BVX2 250 aa11.56□□□□□ -0.56
SRRM1-213ENST00000485441 P3H3Q8IVL6 736 aa11.55□□□□□ -0.56
SRRM1-213ENST00000485441 KCNV2Q8TDN2 545 aa11.55□□□□□ -0.56
SRRM1-213ENST00000485441 WDR70Q9NW82 654 aa11.54□□□□□ -0.56
SRRM1-213ENST00000485441 ILDR1Q86SU0 546 aaPredicted RBP11.52□□□□□ -0.57
SRRM1-213ENST00000485441 TIE1P35590 1138 aa11.5□□□□□ -0.57
SRRM1-213ENST00000485441 NCKAP5LQ9HCH0 1330 aa11.49□□□□□ -0.57
SRRM1-213ENST00000485441 TTLL13PA6NNM8 815 aa11.48□□□□□ -0.57
SRRM1-213ENST00000485441 BMP2KQ9NSY1 1161 aaPredicted RBP11.46□□□□□ -0.57
SRRM1-213ENST00000485441 EVX2Q03828 476 aa11.45□□□□□ -0.58
SRRM1-213ENST00000485441 MFSD10Q14728 455 aa11.44□□□□□ -0.58
SRRM1-213ENST00000485441 ARHGEF1Q92888 912 aaKnown RBP11.44□□□□□ -0.58
SRRM1-213ENST00000485441 CRISPLD2Q9H0B8 497 aa11.44□□□□□ -0.58
SRRM1-213ENST00000485441 GALR2O43603 387 aaPredicted RBP11.43□□□□□ -0.58
SRRM1-213ENST00000485441 GOLGA2Q08379 1002 aa11.43□□□□□ -0.58
SRRM1-213ENST00000485441 MKRN3Q13064 507 aaKnown RBP11.43□□□□□ -0.58
SRRM1-213ENST00000485441 E2F4Q16254 413 aa11.43□□□□□ -0.58
SRRM1-213ENST00000485441 PDE4AP27815 886 aa11.41□□□□□ -0.58
SRRM1-213ENST00000485441 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.41□□□□□ -0.58
SRRM1-213ENST00000485441 LARP6Q9BRS8 491 aaKnown RBP11.4□□□□□ -0.58
SRRM1-213ENST00000485441 CLCN6P51797 869 aa11.38□□□□□ -0.59
SRRM1-213ENST00000485441 TRIM35Q9UPQ4 493 aa11.37□□□□□ -0.59
SRRM1-213ENST00000485441 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.36□□□□□ -0.592e-8■■■□□ 19
SRRM1-213ENST00000485441 ARIH1Q9Y4X5 557 aaPredicted RBP11.36□□□□□ -0.59
SRRM1-213ENST00000485441 HAX1O00165 279 aa11.35□□□□□ -0.59
SRRM1-213ENST00000485441 CAMK2BQ13554 666 aa11.35□□□□□ -0.59
SRRM1-213ENST00000485441 DPY19L2Q6NUT2 758 aa11.33□□□□□ -0.6
SRRM1-213ENST00000485441 LMOD2Q6P5Q4 547 aa11.32□□□□□ -0.6
SRRM1-213ENST00000485441 DDX27Q96GQ7 796 aaKnown RBP11.32□□□□□ -0.6
SRRM1-213ENST00000485441 TESPA1A2RU30 521 aaPredicted RBP11.31□□□□□ -0.6
SRRM1-213ENST00000485441 ATN1P54259 1190 aaPredicted RBP11.31□□□□□ -0.6
SRRM1-213ENST00000485441 PDCD7Q8N8D1 485 aaKnown RBP11.31□□□□□ -0.6
SRRM1-213ENST00000485441 SEMA3EO15041 775 aa11.3□□□□□ -0.6
SRRM1-213ENST00000485441 GPHNQ9NQX3 736 aaPredicted RBP11.3□□□□□ -0.6
SRRM1-213ENST00000485441 ATMINO43313 823 aaPredicted RBP11.29□□□□□ -0.6
SRRM1-213ENST00000485441 ASTLQ6HA08 431 aaPredicted RBP11.29□□□□□ -0.6
SRRM1-213ENST00000485441 IRX5P78411 483 aaPredicted RBP11.28□□□□□ -0.6
SRRM1-213ENST00000485441 MICALL2Q8IY33 904 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms