RNA–Protein interactions for RNA: ENST00000484907.1

CDC16-208, Transcript of cell division cycle 16, humanhuman

TSL 3

Gene CDC16, Length 1,038 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC16-208ENST00000484907 CC2D2AQ9P2K1 1620 aa17.01■□□□□ 0.31
CDC16-208ENST00000484907 PIP4P2Q8N4L2 257 aa16.97■□□□□ 0.31
CDC16-208ENST00000484907 CADPSQ9ULU8 1353 aa16.95■□□□□ 0.3
CDC16-208ENST00000484907 SOGA1O94964 1423 aa16.94■□□□□ 0.3
CDC16-208ENST00000484907 SPDYE1Q8NFV5 336 aaPredicted RBP16.92■□□□□ 0.3
CDC16-208ENST00000484907 SYNJ1O43426 1573 aa16.9■□□□□ 0.3
CDC16-208ENST00000484907 FXR2P51116 673 aaKnown RBP eCLIP16.9■□□□□ 0.3
CDC16-208ENST00000484907 CLEC11AQ9Y240 323 aa16.87■□□□□ 0.29
CDC16-208ENST00000484907 TOP2BQ02880 1626 aa16.87■□□□□ 0.29
CDC16-208ENST00000484907 RUSC2Q8N2Y8 1516 aa16.82■□□□□ 0.28
CDC16-208ENST00000484907 TNIKQ9UKE5 1360 aa16.81■□□□□ 0.28
CDC16-208ENST00000484907 BIVM-ERCC5R4GMW8 1640 aa16.81■□□□□ 0.28
CDC16-208ENST00000484907 CUX1P39880 1505 aa16.78■□□□□ 0.28
CDC16-208ENST00000484907 GOLGA3Q08378 1498 aa16.73■□□□□ 0.27
CDC16-208ENST00000484907 CEP164Q9UPV0 1460 aa16.73■□□□□ 0.27
CDC16-208ENST00000484907 PRDM2Q13029 1718 aa16.72■□□□□ 0.27
CDC16-208ENST00000484907 FANCD2Q9BXW9 1451 aa16.69■□□□□ 0.26
CDC16-208ENST00000484907 TRIM26Q12899 539 aaPredicted RBP16.69■□□□□ 0.26
CDC16-208ENST00000484907 KIF21BO75037 1637 aa16.68■□□□□ 0.26
CDC16-208ENST00000484907 SPDYE4A6NLX3 237 aa16.67■□□□□ 0.26
CDC16-208ENST00000484907 UBTFP17480 764 aaKnown RBP16.67■□□□□ 0.26
CDC16-208ENST00000484907 PRKAR2AP13861 404 aaKnown RBP16.66■□□□□ 0.26
CDC16-208ENST00000484907 KIF27Q86VH2 1401 aa16.66■□□□□ 0.26
CDC16-208ENST00000484907 LAMC3Q9Y6N6 1575 aa16.65■□□□□ 0.26
CDC16-208ENST00000484907 PCGF6Q9BYE7 350 aa16.65■□□□□ 0.26
CDC16-208ENST00000484907 CEP162Q5TB80 1403 aa16.64■□□□□ 0.25
CDC16-208ENST00000484907 PRR29P0C7W0 189 aa16.63■□□□□ 0.25
CDC16-208ENST00000484907 PRXQ9BXM0 1461 aa16.62■□□□□ 0.25
CDC16-208ENST00000484907 HAX1O00165 279 aa16.6■□□□□ 0.25
CDC16-208ENST00000484907 PDS5BQ9NTI5 1447 aa16.6■□□□□ 0.25
CDC16-208ENST00000484907 NESP48681 1621 aa16.59■□□□□ 0.25
CDC16-208ENST00000484907 ERICH3Q5RHP9 1530 aa16.57■□□□□ 0.24
CDC16-208ENST00000484907 RAPGEF2Q9Y4G8 1499 aa16.55■□□□□ 0.24
CDC16-208ENST00000484907 IGF1RP08069 1367 aa16.55■□□□□ 0.24
CDC16-208ENST00000484907 DNMBPQ6XZF7 1577 aa16.55■□□□□ 0.24
CDC16-208ENST00000484907 FGD5Q6ZNL6 1462 aa16.54■□□□□ 0.24
CDC16-208ENST00000484907 SP7Q8TDD2 431 aaPredicted RBP16.53■□□□□ 0.24
CDC16-208ENST00000484907 TOPBP1Q92547 1522 aa16.53■□□□□ 0.24
CDC16-208ENST00000484907 CHADLQ6NUI6 762 aa16.52■□□□□ 0.24
CDC16-208ENST00000484907 CUX2O14529 1486 aa16.51■□□□□ 0.23
CDC16-208ENST00000484907 CLIP1P30622 1438 aa16.48■□□□□ 0.23
CDC16-208ENST00000484907 ABCA10Q8WWZ4 1543 aa16.47■□□□□ 0.23
CDC16-208ENST00000484907 STAG3Q9UJ98 1225 aa16.47■□□□□ 0.23
CDC16-208ENST00000484907 URB2Q14146 1524 aaKnown RBP16.45■□□□□ 0.22
CDC16-208ENST00000484907 POLA1P09884 1462 aaPredicted RBP16.45■□□□□ 0.22
CDC16-208ENST00000484907 HRCP23327 699 aa16.44■□□□□ 0.22
CDC16-208ENST00000484907 CARMIL1Q5VZK9 1371 aa16.43■□□□□ 0.22
CDC16-208ENST00000484907 RAD54L2Q9Y4B4 1467 aa16.4■□□□□ 0.22
CDC16-208ENST00000484907 EVX2Q03828 476 aa16.38■□□□□ 0.21
CDC16-208ENST00000484907 VPS8Q8N3P4 1428 aa16.37■□□□□ 0.21
CDC16-208ENST00000484907 C19orf67A6NJJ6 358 aa16.35■□□□□ 0.21
CDC16-208ENST00000484907 MRC2Q9UBG0 1479 aa16.31■□□□□ 0.2
CDC16-208ENST00000484907 PROM2Q8N271 834 aa16.31■□□□□ 0.2
CDC16-208ENST00000484907 FARP1Q9Y4F1 1045 aaPredicted RBP16.31■□□□□ 0.2
CDC16-208ENST00000484907 PPARGC1BQ86YN6 1023 aaKnown RBP16.3■□□□□ 0.2
CDC16-208ENST00000484907 KIF21AQ7Z4S6 1674 aa16.27■□□□□ 0.2
CDC16-208ENST00000484907 CREBZFQ9NS37 354 aa16.26■□□□□ 0.19
CDC16-208ENST00000484907 GAPVD1Q14C86 1478 aa16.26■□□□□ 0.19
CDC16-208ENST00000484907 ARAP1Q96P48 1450 aa16.26■□□□□ 0.19
CDC16-208ENST00000484907 TDRD9Q8NDG6 1382 aaKnown RBP16.26■□□□□ 0.19
CDC16-208ENST00000484907 WDR97A6NE52 1622 aa16.24■□□□□ 0.19
CDC16-208ENST00000484907 CUL7Q14999 1698 aa16.23■□□□□ 0.19
CDC16-208ENST00000484907 TARBP1Q13395 1621 aaKnown RBP16.23■□□□□ 0.19
CDC16-208ENST00000484907 ARHGAP35Q9NRY4 1499 aa16.22■□□□□ 0.19
CDC16-208ENST00000484907 ABCA5Q8WWZ7 1642 aa16.22■□□□□ 0.19
CDC16-208ENST00000484907 ZEB1P37275 1124 aaPredicted RBP16.2■□□□□ 0.18
CDC16-208ENST00000484907 RANGAP1P46060 587 aaPredicted RBP16.2■□□□□ 0.18
CDC16-208ENST00000484907 WDR62O43379 1518 aa16.19■□□□□ 0.18
CDC16-208ENST00000484907 IFT140Q96RY7 1462 aa16.18■□□□□ 0.18
CDC16-208ENST00000484907 CD44P16070 742 aaKnown RBP16.16■□□□□ 0.18
CDC16-208ENST00000484907 FHAD1B1AJZ9 1412 aa16.12■□□□□ 0.17
CDC16-208ENST00000484907 ERCC6Q03468 1493 aa16.11■□□□□ 0.17
CDC16-208ENST00000484907 GRIN2BQ13224 1484 aa16.11■□□□□ 0.17
CDC16-208ENST00000484907 MAP3K1Q13233 1512 aa16.11■□□□□ 0.17
CDC16-208ENST00000484907 AQRO60306 1485 aaKnown RBP eCLIP16.1■□□□□ 0.17
CDC16-208ENST00000484907 EFCAB5A4FU69 1503 aa16.09■□□□□ 0.17
CDC16-208ENST00000484907 FKBP8Q14318 412 aa16.08■□□□□ 0.16
CDC16-208ENST00000484907 TTBK1Q5TCY1 1321 aaPredicted RBP16.06■□□□□ 0.16
CDC16-208ENST00000484907 GABBR2O75899 941 aa16.05■□□□□ 0.16
CDC16-208ENST00000484907 KANK4Q5T7N3 995 aaPredicted RBP16.05■□□□□ 0.16
CDC16-208ENST00000484907 MNX1P50219 401 aaPredicted RBP16.02■□□□□ 0.16
CDC16-208ENST00000484907 ZNF608Q9ULD9 1512 aaPredicted RBP16.02■□□□□ 0.15
CDC16-208ENST00000484907 THOC2Q8NI27 1593 aaKnown RBP16.01■□□□□ 0.15
CDC16-208ENST00000484907 FMN1Q68DA7 1419 aa16■□□□□ 0.15
CDC16-208ENST00000484907 CASKIN1Q8WXD9 1431 aa16■□□□□ 0.15
CDC16-208ENST00000484907 NPM1P06748 294 aaKnown RBP eCLIP15.99■□□□□ 0.15
CDC16-208ENST00000484907 ADAMTS12P58397 1594 aa15.99■□□□□ 0.15
CDC16-208ENST00000484907 CTTNBP2Q8WZ74 1663 aa15.99■□□□□ 0.15
CDC16-208ENST00000484907 P3H3Q8IVL6 736 aa15.98■□□□□ 0.15
CDC16-208ENST00000484907 FHOD3Q2V2M9 1422 aa15.97■□□□□ 0.15
CDC16-208ENST00000484907 PBRM1Q86U86 1689 aa15.97■□□□□ 0.15
CDC16-208ENST00000484907 ZRANB1Q9UGI0 708 aa15.96■□□□□ 0.15
CDC16-208ENST00000484907 FYCO1Q9BQS8 1478 aa15.96■□□□□ 0.14
CDC16-208ENST00000484907 RRBP1Q9P2E9 1410 aaKnown RBP15.95■□□□□ 0.14
CDC16-208ENST00000484907 SAMD9Q5K651 1589 aa15.95■□□□□ 0.14
CDC16-208ENST00000484907 MAGI1Q96QZ7 1491 aaPredicted RBP15.94■□□□□ 0.14
CDC16-208ENST00000484907 TIAM1Q13009 1591 aa15.94■□□□□ 0.14
CDC16-208ENST00000484907 ZNF579Q8NAF0 562 aaKnown RBP15.93■□□□□ 0.14
CDC16-208ENST00000484907 LRRC9Q6ZRR7 1453 aa15.92■□□□□ 0.14
CDC16-208ENST00000484907 CCER1Q8TC90 406 aaPredicted RBP15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms