RNA–Protein interactions for RNA: ENST00000484328.1

NCL-209, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 369 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-209ENST00000484328 GOLGA3Q08378 1498 aa10.68□□□□□ -0.7
NCL-209ENST00000484328 IQGAP2Q13576 1575 aa10.65□□□□□ -0.7
NCL-209ENST00000484328 CHMP7Q8WUX9 453 aaPredicted RBP10.65□□□□□ -0.7
NCL-209ENST00000484328 KIAA0586Q9BVV6 1533 aa10.64□□□□□ -0.71
NCL-209ENST00000484328 FAM9AQ8IZU1 332 aaPredicted RBP10.64□□□□□ -0.71
NCL-209ENST00000484328 FBLN2P98095 1184 aa10.61□□□□□ -0.71
NCL-209ENST00000484328 UGGT2Q9NYU1 1516 aa10.61□□□□□ -0.71
NCL-209ENST00000484328 OSCARQ8IYS5 282 aa10.59□□□□□ -0.71
NCL-209ENST00000484328 SAMD9Q5K651 1589 aa10.59□□□□□ -0.71
NCL-209ENST00000484328 KIAA0556O60303 1618 aa10.56□□□□□ -0.72
NCL-209ENST00000484328 EFCAB5A4FU69 1503 aa10.56□□□□□ -0.72
NCL-209ENST00000484328 DISP1Q96F81 1524 aa10.55□□□□□ -0.72
NCL-209ENST00000484328 ERCC6L2Q5T890 1561 aa10.55□□□□□ -0.72
NCL-209ENST00000484328 TNIKQ9UKE5 1360 aa10.54□□□□□ -0.72
NCL-209ENST00000484328 ARHGEF11O15085 1522 aa10.54□□□□□ -0.72
NCL-209ENST00000484328 RIMBP3CA6NJZ7 1639 aa10.54□□□□□ -0.72
NCL-209ENST00000484328 RIMBP3BA6NNM3 1639 aa10.54□□□□□ -0.72
NCL-209ENST00000484328 RIMBP3Q9UFD9 1639 aa10.54□□□□□ -0.72
NCL-209ENST00000484328 PRG4Q92954 1404 aaPredicted RBP10.51□□□□□ -0.73
NCL-209ENST00000484328 ARHGAP35Q9NRY4 1499 aa10.49□□□□□ -0.73
NCL-209ENST00000484328 JPH4Q96JJ6 628 aa10.49□□□□□ -0.73
NCL-209ENST00000484328 CARMIL2Q6F5E8 1435 aa10.48□□□□□ -0.73
NCL-209ENST00000484328 UBTFP17480 764 aaKnown RBP10.47□□□□□ -0.73
NCL-209ENST00000484328 CEP162Q5TB80 1403 aa10.47□□□□□ -0.73
NCL-209ENST00000484328 ARAP1Q96P48 1450 aa10.47□□□□□ -0.73
NCL-209ENST00000484328 CLIP1P30622 1438 aa10.45□□□□□ -0.74
NCL-209ENST00000484328 LOC105371045A0A1W2PR82 267 aa10.45□□□□□ -0.74
NCL-209ENST00000484328 DNAJC5Q9H3Z4 198 aa10.45□□□□□ -0.74
NCL-209ENST00000484328 FOXD1Q16676 465 aa10.44□□□□□ -0.74
NCL-209ENST00000484328 EHMT2Q96KQ7 1210 aa10.44□□□□□ -0.74
NCL-209ENST00000484328 ABCA8O94911 1581 aa10.43□□□□□ -0.74
NCL-209ENST00000484328 FHOD3Q2V2M9 1422 aa10.42□□□□□ -0.74
NCL-209ENST00000484328 ADCY10Q96PN6 1610 aa10.41□□□□□ -0.74
NCL-209ENST00000484328 RAPGEF6Q8TEU7 1601 aa10.4□□□□□ -0.74
NCL-209ENST00000484328 PCF11O94913 1555 aaKnown RBP10.4□□□□□ -0.74
NCL-209ENST00000484328 ABCC2Q92887 1545 aa10.4□□□□□ -0.74
NCL-209ENST00000484328 UHRF1BP1LA0JNW5 1464 aa10.4□□□□□ -0.74
NCL-209ENST00000484328 PTPRGP23470 1445 aa10.39□□□□□ -0.75
NCL-209ENST00000484328 LRRIQ1Q96JM4 1722 aa10.38□□□□□ -0.75
NCL-209ENST00000484328 FMN1Q68DA7 1419 aa10.38□□□□□ -0.75
NCL-209ENST00000484328 PLB1Q6P1J6 1458 aa10.37□□□□□ -0.75
NCL-209ENST00000484328 HECW1Q76N89 1606 aa10.37□□□□□ -0.75
NCL-209ENST00000484328 FYCO1Q9BQS8 1478 aa10.36□□□□□ -0.75
NCL-209ENST00000484328 UACAQ9BZF9 1416 aa10.36□□□□□ -0.75
NCL-209ENST00000484328 ZCCHC11Q5TAX3 1644 aaKnown RBP10.35□□□□□ -0.75
NCL-209ENST00000484328 NUP153P49790 1475 aaKnown RBP10.35□□□□□ -0.75
NCL-209ENST00000484328 VPS8Q8N3P4 1428 aa10.34□□□□□ -0.75
NCL-209ENST00000484328 CASKIN1Q8WXD9 1431 aa10.34□□□□□ -0.75
NCL-209ENST00000484328 KDM5BQ9UGL1 1544 aa10.34□□□□□ -0.75
NCL-209ENST00000484328 CFAP43Q8NDM7 1665 aa10.34□□□□□ -0.75
NCL-209ENST00000484328 RANGAP1P46060 587 aaPredicted RBP10.33□□□□□ -0.76
NCL-209ENST00000484328 P3H3Q8IVL6 736 aa10.33□□□□□ -0.76
NCL-209ENST00000484328 MAPKBP1O60336 1514 aa10.31□□□□□ -0.76
NCL-209ENST00000484328 EPRSP07814 1512 aaKnown RBP10.3□□□□□ -0.76
NCL-209ENST00000484328 CCDC18Q5T9S5 1454 aa10.3□□□□□ -0.76
NCL-209ENST00000484328 MAP3K1Q13233 1512 aa10.28□□□□□ -0.76
NCL-209ENST00000484328 CDK13Q14004 1512 aaKnown RBP10.28□□□□□ -0.76
NCL-209ENST00000484328 TIAM1Q13009 1591 aa10.28□□□□□ -0.76
NCL-209ENST00000484328 CYB5RLQ6IPT4 315 aa10.28□□□□□ -0.76
NCL-209ENST00000484328 ATP10BO94823 1461 aa10.28□□□□□ -0.76
NCL-209ENST00000484328 TTBK1Q5TCY1 1321 aaPredicted RBP10.25□□□□□ -0.77
NCL-209ENST00000484328 MAGI3Q5TCQ9 1506 aa10.24□□□□□ -0.77
NCL-209ENST00000484328 WDR7Q9Y4E6 1490 aa10.23□□□□□ -0.77
NCL-209ENST00000484328 DIP2BQ9P265 1576 aa10.23□□□□□ -0.77
NCL-209ENST00000484328 EHBP1L1Q8N3D4 1523 aa10.23□□□□□ -0.77
NCL-209ENST00000484328 KIF13AQ9H1H9 1805 aa10.22□□□□□ -0.77
NCL-209ENST00000484328 ASXL2Q76L83 1435 aa10.22□□□□□ -0.77
NCL-209ENST00000484328 GLI2P10070 1586 aa10.21□□□□□ -0.78
NCL-209ENST00000484328 KIF14Q15058 1648 aa10.21□□□□□ -0.78
NCL-209ENST00000484328 ABCA9Q8IUA7 1624 aa10.21□□□□□ -0.78
NCL-209ENST00000484328 MAP3K4Q9Y6R4 1608 aa10.19□□□□□ -0.78
NCL-209ENST00000484328 ABCC10Q5T3U5 1492 aa10.19□□□□□ -0.78
NCL-209ENST00000484328 LRRC9Q6ZRR7 1453 aa10.19□□□□□ -0.78
NCL-209ENST00000484328 TROQ12816 1431 aaPredicted RBP10.19□□□□□ -0.78
NCL-209ENST00000484328 TTC37Q6PGP7 1564 aa10.18□□□□□ -0.78
NCL-209ENST00000484328 SUPT6HQ7KZ85 1726 aaKnown RBP10.18□□□□□ -0.78
NCL-209ENST00000484328 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.17□□□□□ -0.784e-30■□□□□ 8.2
NCL-209ENST00000484328 NPM1P06748 294 aaKnown RBP eCLIP10.16□□□□□ -0.782e-32■■■□□ 16
NCL-209ENST00000484328 MYO5CQ9NQX4 1742 aa10.16□□□□□ -0.78
NCL-209ENST00000484328 PPRC1Q5VV67 1664 aaKnown RBP10.15□□□□□ -0.78
NCL-209ENST00000484328 PREX2Q70Z35 1606 aa10.15□□□□□ -0.78
NCL-209ENST00000484328 ARID3CA6NKF2 412 aa10.15□□□□□ -0.78
NCL-209ENST00000484328 CDC42BPAQ5VT25 1732 aa10.15□□□□□ -0.78
NCL-209ENST00000484328 ITSN2Q9NZM3 1697 aa10.15□□□□□ -0.79
NCL-209ENST00000484328 ARAP3Q8WWN8 1544 aa10.14□□□□□ -0.79
NCL-209ENST00000484328 ATP1B4Q9UN42 357 aaPredicted RBP10.13□□□□□ -0.79
NCL-209ENST00000484328 MTUS2Q5JR59 1369 aa10.13□□□□□ -0.79
NCL-209ENST00000484328 CDK11AQ9UQ88 783 aaPredicted RBP10.12□□□□□ -0.79
NCL-209ENST00000484328 NCOA2Q15596 1464 aa10.11□□□□□ -0.79
NCL-209ENST00000484328 CDC42BPBQ9Y5S2 1711 aa10.11□□□□□ -0.79
NCL-209ENST00000484328 CFAP74Q9C0B2 1584 aa10.11□□□□□ -0.79
NCL-209ENST00000484328 PLEKHD1A6NEE1 506 aa10.11□□□□□ -0.79
NCL-209ENST00000484328 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.1□□□□□ -0.79
NCL-209ENST00000484328 HNRNPUL2Q1KMD3 747 aaKnown RBP10.1□□□□□ -0.79
NCL-209ENST00000484328 KANK4Q5T7N3 995 aaPredicted RBP10.09□□□□□ -0.79
NCL-209ENST00000484328 GPATCH8Q9UKJ3 1502 aaKnown RBP10.08□□□□□ -0.8
NCL-209ENST00000484328 APLP2Q06481 763 aa10.07□□□□□ -0.8
NCL-209ENST00000484328 PLCH2O75038 1416 aa10.07□□□□□ -0.8
NCL-209ENST00000484328 TSPOAP1O95153 1857 aa10.06□□□□□ -0.8
NCL-209ENST00000484328 MYOM3Q5VTT5 1437 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms