RNA–Protein interactions for RNA: ENST00000482096.1

UBE2F-222, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 4

Gene UBE2F, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-222ENST00000482096 SNAPC4Q5SXM2 1469 aa15.66■□□□□ 0.1
UBE2F-222ENST00000482096 WDR97A6NE52 1622 aa15.66■□□□□ 0.1
UBE2F-222ENST00000482096 CHMP7Q8WUX9 453 aaPredicted RBP15.65■□□□□ 0.1
UBE2F-222ENST00000482096 MYCNP04198 464 aaPredicted RBP15.64■□□□□ 0.09
UBE2F-222ENST00000482096 U3KPZ7 1027 aaPredicted RBP15.63■□□□□ 0.09
UBE2F-222ENST00000482096 GRIN2BQ13224 1484 aa15.63■□□□□ 0.09
UBE2F-222ENST00000482096 MAGI1Q96QZ7 1491 aaPredicted RBP15.63■□□□□ 0.09
UBE2F-222ENST00000482096 TRHP20396 242 aaPredicted RBP15.62■□□□□ 0.09
UBE2F-222ENST00000482096 CLASP1Q7Z460 1538 aa15.6■□□□□ 0.09
UBE2F-222ENST00000482096 SYNJ2O15056 1496 aa15.59■□□□□ 0.09
UBE2F-222ENST00000482096 SYNJ1O43426 1573 aa15.58■□□□□ 0.08
UBE2F-222ENST00000482096 GAPVD1Q14C86 1478 aa15.56■□□□□ 0.08
UBE2F-222ENST00000482096 ABCA10Q8WWZ4 1543 aa15.53■□□□□ 0.08
UBE2F-222ENST00000482096 SUPT5HO00267 1087 aaKnown RBP15.51■□□□□ 0.07
UBE2F-222ENST00000482096 RNF39Q9H2S5 420 aa15.48■□□□□ 0.07
UBE2F-222ENST00000482096 ABCA5Q8WWZ7 1642 aa15.47■□□□□ 0.07
UBE2F-222ENST00000482096 PBRM1Q86U86 1689 aa15.47■□□□□ 0.07
UBE2F-222ENST00000482096 WRNQ14191 1432 aaPredicted RBP eCLIP15.45■□□□□ 0.06
UBE2F-222ENST00000482096 GRIN2AQ12879 1464 aa15.42■□□□□ 0.06
UBE2F-222ENST00000482096 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.4■□□□□ 0.06
UBE2F-222ENST00000482096 HNRNPUL2Q1KMD3 747 aaKnown RBP15.4■□□□□ 0.06
UBE2F-222ENST00000482096 NUP160Q12769 1436 aa15.39■□□□□ 0.05
UBE2F-222ENST00000482096 TOP2BQ02880 1626 aa15.37■□□□□ 0.05
UBE2F-222ENST00000482096 SAMD1Q6SPF0 538 aaPredicted RBP15.37■□□□□ 0.05
UBE2F-222ENST00000482096 FHAD1B1AJZ9 1412 aa15.36■□□□□ 0.05
UBE2F-222ENST00000482096 ADAMTS12P58397 1594 aa15.36■□□□□ 0.05
UBE2F-222ENST00000482096 BIVM-ERCC5R4GMW8 1640 aa15.35■□□□□ 0.05
UBE2F-222ENST00000482096 CEP170Q5SW79 1584 aa15.34■□□□□ 0.05
UBE2F-222ENST00000482096 ERCC6L2Q5T890 1561 aa15.34■□□□□ 0.05
UBE2F-222ENST00000482096 ERICH3Q5RHP9 1530 aa15.32■□□□□ 0.04
UBE2F-222ENST00000482096 ATXN8OSP0DMR3 200 aa15.3■□□□□ 0.04
UBE2F-222ENST00000482096 SHROOM2Q13796 1616 aa15.28■□□□□ 0.04
UBE2F-222ENST00000482096 C1QBPQ07021 282 aaKnown RBP15.27■□□□□ 0.04
UBE2F-222ENST00000482096 ATF5Q9Y2D1 282 aaPredicted RBP15.27■□□□□ 0.04
UBE2F-222ENST00000482096 JPH4Q96JJ6 628 aa15.26■□□□□ 0.03
UBE2F-222ENST00000482096 PRG4Q92954 1404 aaPredicted RBP15.24■□□□□ 0.03
UBE2F-222ENST00000482096 APLP2Q06481 763 aa15.2■□□□□ 0.02
UBE2F-222ENST00000482096 SPINK5Q9NQ38 1064 aaPredicted RBP15.18■□□□□ 0.02
UBE2F-222ENST00000482096 IGF1RP08069 1367 aa15.14■□□□□ 0.01
UBE2F-222ENST00000482096 RUSC2Q8N2Y8 1516 aa15.14■□□□□ 0.01
UBE2F-222ENST00000482096 NPM1P06748 294 aaKnown RBP eCLIP15.12■□□□□ 0.01
UBE2F-222ENST00000482096 KIAA0586Q9BVV6 1533 aa15.12■□□□□ 0.01
UBE2F-222ENST00000482096 KIF27Q86VH2 1401 aa15.1■□□□□ 0.01
UBE2F-222ENST00000482096 CAPN15O75808 1086 aa15.1■□□□□ 0.01
UBE2F-222ENST00000482096 FAM69CQ0P6D2 419 aa15.1■□□□□ 0.01
UBE2F-222ENST00000482096 ABCC10Q5T3U5 1492 aa15.09■□□□□ 0.01
UBE2F-222ENST00000482096 KIF13AQ9H1H9 1805 aa15.09■□□□□ 0.01
UBE2F-222ENST00000482096 MAPKBP1O60336 1514 aa15.07■□□□□ 0
UBE2F-222ENST00000482096 ADCY10Q96PN6 1610 aa15.04■□□□□ -0
UBE2F-222ENST00000482096 CUL7Q14999 1698 aa15.03■□□□□ -0
UBE2F-222ENST00000482096 CARMIL1Q5VZK9 1371 aa15.03■□□□□ -0
UBE2F-222ENST00000482096 CACNB1Q02641 598 aaPredicted RBP15.01□□□□□ -0.01
UBE2F-222ENST00000482096 ZNF219Q9P2Y4 722 aaPredicted RBP15.01□□□□□ -0.01
UBE2F-222ENST00000482096 DIP2BQ9P265 1576 aa15.01□□□□□ -0.01
UBE2F-222ENST00000482096 PTPRGP23470 1445 aa15□□□□□ -0.01
UBE2F-222ENST00000482096 CARMIL2Q6F5E8 1435 aa14.96□□□□□ -0.01
UBE2F-222ENST00000482096 TNIKQ9UKE5 1360 aa14.96□□□□□ -0.02
UBE2F-222ENST00000482096 TTBK1Q5TCY1 1321 aaPredicted RBP14.93□□□□□ -0.02
UBE2F-222ENST00000482096 ABCC2Q92887 1545 aa14.92□□□□□ -0.02
UBE2F-222ENST00000482096 IQGAP2Q13576 1575 aa14.9□□□□□ -0.02
UBE2F-222ENST00000482096 KDM6BO15054 1643 aa14.9□□□□□ -0.02
UBE2F-222ENST00000482096 UHRF1BP1LA0JNW5 1464 aa14.89□□□□□ -0.03
UBE2F-222ENST00000482096 PLB1Q6P1J6 1458 aa14.89□□□□□ -0.03
UBE2F-222ENST00000482096 KDM4FA0A1W2PPD8 638 aa14.88□□□□□ -0.03
UBE2F-222ENST00000482096 ASXL2Q76L83 1435 aa14.88□□□□□ -0.03
UBE2F-222ENST00000482096 DISP1Q96F81 1524 aa14.87□□□□□ -0.03
UBE2F-222ENST00000482096 UACAQ9BZF9 1416 aa14.87□□□□□ -0.03
UBE2F-222ENST00000482096 ABCB7O75027 752 aa14.86□□□□□ -0.03
UBE2F-222ENST00000482096 RAPGEF2Q9Y4G8 1499 aa14.86□□□□□ -0.03
UBE2F-222ENST00000482096 TSPOAP1O95153 1857 aa14.85□□□□□ -0.03
UBE2F-222ENST00000482096 UGGT2Q9NYU1 1516 aa14.84□□□□□ -0.03
UBE2F-222ENST00000482096 GLI2P10070 1586 aa14.84□□□□□ -0.03
UBE2F-222ENST00000482096 POLA2Q14181 598 aa14.83□□□□□ -0.04
UBE2F-222ENST00000482096 KDM5BQ9UGL1 1544 aa14.82□□□□□ -0.04
UBE2F-222ENST00000482096 EPRSP07814 1512 aaKnown RBP14.79□□□□□ -0.04
UBE2F-222ENST00000482096 DSG3P32926 999 aa14.79□□□□□ -0.04
UBE2F-222ENST00000482096 PPRC1Q5VV67 1664 aaKnown RBP14.77□□□□□ -0.04
UBE2F-222ENST00000482096 KIAA0556O60303 1618 aa14.77□□□□□ -0.05
UBE2F-222ENST00000482096 COL17A1Q9UMD9 1497 aaPredicted RBP14.76□□□□□ -0.05
UBE2F-222ENST00000482096 TEX14Q8IWB6 1497 aa14.73□□□□□ -0.05
UBE2F-222ENST00000482096 ZCCHC11Q5TAX3 1644 aaKnown RBP14.73□□□□□ -0.05
UBE2F-222ENST00000482096 MAP3K4Q9Y6R4 1608 aa14.72□□□□□ -0.05
UBE2F-222ENST00000482096 WDR7Q9Y4E6 1490 aa14.71□□□□□ -0.05
UBE2F-222ENST00000482096 GOLGA3Q08378 1498 aa14.7□□□□□ -0.06
UBE2F-222ENST00000482096 PRXQ9BXM0 1461 aa14.69□□□□□ -0.06
UBE2F-222ENST00000482096 ADGRL1O94910 1474 aa14.68□□□□□ -0.06
UBE2F-222ENST00000482096 ABCA8O94911 1581 aa14.66□□□□□ -0.06
UBE2F-222ENST00000482096 CTTNBP2Q8WZ74 1663 aa14.65□□□□□ -0.06
UBE2F-222ENST00000482096 KCNH8Q96L42 1107 aa14.65□□□□□ -0.06
UBE2F-222ENST00000482096 CD109Q6YHK3 1445 aa14.65□□□□□ -0.06
UBE2F-222ENST00000482096 MAGI3Q5TCQ9 1506 aa14.64□□□□□ -0.07
UBE2F-222ENST00000482096 MKRN4PQ13434 485 aaPredicted RBP14.6□□□□□ -0.07
UBE2F-222ENST00000482096 FAM9AQ8IZU1 332 aaPredicted RBP14.6□□□□□ -0.07
UBE2F-222ENST00000482096 CFAP43Q8NDM7 1665 aa14.59□□□□□ -0.07
UBE2F-222ENST00000482096 P3H3Q8IVL6 736 aa14.57□□□□□ -0.08
UBE2F-222ENST00000482096 ATP10BO94823 1461 aa14.57□□□□□ -0.08
UBE2F-222ENST00000482096 ARID3CA6NKF2 412 aa14.55□□□□□ -0.08
UBE2F-222ENST00000482096 ZBTB12Q9Y330 459 aaPredicted RBP14.54□□□□□ -0.08
UBE2F-222ENST00000482096 ARAP3Q8WWN8 1544 aa14.53□□□□□ -0.08
UBE2F-222ENST00000482096 ILDR1Q86SU0 546 aaPredicted RBP14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms