RNA–Protein interactions for RNA: ENST00000481849.5

HLA-B-253, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-253ENST00000481849 LMTK3Q96Q04 1460 aa16.73■□□□□ 0.27
HLA-B-253ENST00000481849 SOCS7O14512 581 aa16.69■□□□□ 0.26
HLA-B-253ENST00000481849 CCDC88BA6NC98 1476 aa16.63■□□□□ 0.25
HLA-B-253ENST00000481849 CHRDL2Q6WN34 429 aa16.63■□□□□ 0.25
HLA-B-253ENST00000481849 URB2Q14146 1524 aaKnown RBP16.63■□□□□ 0.25
HLA-B-253ENST00000481849 ARAP1Q96P48 1450 aa16.58■□□□□ 0.24
HLA-B-253ENST00000481849 AKT1S1Q96B36 256 aa16.54■□□□□ 0.24
HLA-B-253ENST00000481849 FBXO41Q8TF61 875 aa16.53■□□□□ 0.24
HLA-B-253ENST00000481849 FBLN2P98095 1184 aa16.47■□□□□ 0.23
HLA-B-253ENST00000481849 ILDR2Q71H61 639 aa16.47■□□□□ 0.23
HLA-B-253ENST00000481849 TOPBP1Q92547 1522 aa16.45■□□□□ 0.22
HLA-B-253ENST00000481849 ZNF608Q9ULD9 1512 aaPredicted RBP16.45■□□□□ 0.22
HLA-B-253ENST00000481849 ERCC6L2Q5T890 1561 aa16.44■□□□□ 0.22
HLA-B-253ENST00000481849 PRDM2Q13029 1718 aa16.44■□□□□ 0.22
HLA-B-253ENST00000481849 IFT140Q96RY7 1462 aa16.43■□□□□ 0.22
HLA-B-253ENST00000481849 KDM4FA0A1W2PPD8 638 aa16.38■□□□□ 0.21
HLA-B-253ENST00000481849 REM2Q8IYK8 340 aaPredicted RBP16.38■□□□□ 0.21
HLA-B-253ENST00000481849 CSRNP3Q8WYN3 585 aa16.37■□□□□ 0.21
HLA-B-253ENST00000481849 ABCC8Q09428 1581 aa16.37■□□□□ 0.21
HLA-B-253ENST00000481849 DNMBPQ6XZF7 1577 aa16.37■□□□□ 0.21
HLA-B-253ENST00000481849 AQRO60306 1485 aaKnown RBP eCLIP16.32■□□□□ 0.2
HLA-B-253ENST00000481849 EIF4G3O43432 1585 aaKnown RBP16.3■□□□□ 0.2
HLA-B-253ENST00000481849 SUPT5HO00267 1087 aaKnown RBP16.29■□□□□ 0.2
HLA-B-253ENST00000481849 POLA1P09884 1462 aaPredicted RBP16.29■□□□□ 0.2
HLA-B-253ENST00000481849 SPDYE2BA6NHP3 402 aa16.28■□□□□ 0.2
HLA-B-253ENST00000481849 SPDYE6P0CI01 402 aa16.28■□□□□ 0.2
HLA-B-253ENST00000481849 SPDYE2Q495Y8 402 aa16.28■□□□□ 0.2
HLA-B-253ENST00000481849 EHMT2Q96KQ7 1210 aa16.28■□□□□ 0.2
HLA-B-253ENST00000481849 RAD54L2Q9Y4B4 1467 aa16.27■□□□□ 0.19
HLA-B-253ENST00000481849 TARBP1Q13395 1621 aaKnown RBP16.25■□□□□ 0.19
HLA-B-253ENST00000481849 TDRD9Q8NDG6 1382 aaKnown RBP16.25■□□□□ 0.19
HLA-B-253ENST00000481849 MKRN4PQ13434 485 aaPredicted RBP16.24■□□□□ 0.19
HLA-B-253ENST00000481849 SOGA1O94964 1423 aa16.24■□□□□ 0.19
HLA-B-253ENST00000481849 HECW2Q9P2P5 1572 aa16.24■□□□□ 0.19
HLA-B-253ENST00000481849 FGD5Q6ZNL6 1462 aa16.21■□□□□ 0.19
HLA-B-253ENST00000481849 DISP3Q9P2K9 1392 aa16.19■□□□□ 0.18
HLA-B-253ENST00000481849 PITPNM1O00562 1244 aa16.19■□□□□ 0.18
HLA-B-253ENST00000481849 PIP4P2Q8N4L2 257 aa16.19■□□□□ 0.18
HLA-B-253ENST00000481849 CUX1P39880 1505 aa16.19■□□□□ 0.18
HLA-B-253ENST00000481849 ZNF692Q9BU19 519 aaPredicted RBP16.14■□□□□ 0.17
HLA-B-253ENST00000481849 SNAPC4Q5SXM2 1469 aa16.14■□□□□ 0.17
HLA-B-253ENST00000481849 CHD1O14646 1710 aa16.14■□□□□ 0.17
HLA-B-253ENST00000481849 CHMP7Q8WUX9 453 aaPredicted RBP16.11■□□□□ 0.17
HLA-B-253ENST00000481849 SP7Q8TDD2 431 aaPredicted RBP16.1■□□□□ 0.17
HLA-B-253ENST00000481849 FXR2P51116 673 aaKnown RBP eCLIP16.07■□□□□ 0.16
HLA-B-253ENST00000481849 GRIN2BQ13224 1484 aa16.07■□□□□ 0.16
HLA-B-253ENST00000481849 MAGI1Q96QZ7 1491 aaPredicted RBP16.03■□□□□ 0.16
HLA-B-253ENST00000481849 WDR97A6NE52 1622 aa16.03■□□□□ 0.16
HLA-B-253ENST00000481849 GAPVD1Q14C86 1478 aa16.03■□□□□ 0.16
HLA-B-253ENST00000481849 CLEC11AQ9Y240 323 aa16.01■□□□□ 0.15
HLA-B-253ENST00000481849 SSUH2Q9Y2M2 353 aa16.01■□□□□ 0.15
HLA-B-253ENST00000481849 SYNJ2O15056 1496 aa16.01■□□□□ 0.15
HLA-B-253ENST00000481849 SPDYE1Q8NFV5 336 aaPredicted RBP16■□□□□ 0.15
HLA-B-253ENST00000481849 ABCA10Q8WWZ4 1543 aa15.99■□□□□ 0.15
HLA-B-253ENST00000481849 HAX1O00165 279 aa15.98■□□□□ 0.15
HLA-B-253ENST00000481849 SYNJ1O43426 1573 aa15.98■□□□□ 0.15
HLA-B-253ENST00000481849 CLASP1Q7Z460 1538 aa15.98■□□□□ 0.15
HLA-B-253ENST00000481849 WRNQ14191 1432 aaPredicted RBP eCLIP15.96■□□□□ 0.15
HLA-B-253ENST00000481849 PBRM1Q86U86 1689 aa15.93■□□□□ 0.14
HLA-B-253ENST00000481849 ABCA5Q8WWZ7 1642 aa15.93■□□□□ 0.14
HLA-B-253ENST00000481849 KIF13AQ9H1H9 1805 aa15.9■□□□□ 0.14
HLA-B-253ENST00000481849 SPATA31D1Q6ZQQ2 1576 aa15.9■□□□□ 0.14
HLA-B-253ENST00000481849 TOP2BQ02880 1626 aa15.89■□□□□ 0.13
HLA-B-253ENST00000481849 BIVM-ERCC5R4GMW8 1640 aa15.86■□□□□ 0.13
HLA-B-253ENST00000481849 GRIN2AQ12879 1464 aa15.85■□□□□ 0.13
HLA-B-253ENST00000481849 ADAMTS12P58397 1594 aa15.83■□□□□ 0.13
HLA-B-253ENST00000481849 ADGRL1O94910 1474 aa15.83■□□□□ 0.12
HLA-B-253ENST00000481849 FHAD1B1AJZ9 1412 aa15.82■□□□□ 0.12
HLA-B-253ENST00000481849 PRKAR2AP13861 404 aaKnown RBP15.81■□□□□ 0.12
HLA-B-253ENST00000481849 CEP170Q5SW79 1584 aa15.79■□□□□ 0.12
HLA-B-253ENST00000481849 NUP160Q12769 1436 aa15.79■□□□□ 0.12
HLA-B-253ENST00000481849 ERICH3Q5RHP9 1530 aa15.77■□□□□ 0.11
HLA-B-253ENST00000481849 PRR29P0C7W0 189 aa15.75■□□□□ 0.11
HLA-B-253ENST00000481849 KDM6BO15054 1643 aa15.74■□□□□ 0.11
HLA-B-253ENST00000481849 EVX2Q03828 476 aa15.71■□□□□ 0.11
HLA-B-253ENST00000481849 JPH4Q96JJ6 628 aa15.69■□□□□ 0.1
HLA-B-253ENST00000481849 PRG4Q92954 1404 aaPredicted RBP15.68■□□□□ 0.1
HLA-B-253ENST00000481849 SHROOM2Q13796 1616 aa15.66■□□□□ 0.1
HLA-B-253ENST00000481849 CHADLQ6NUI6 762 aa15.64■□□□□ 0.09
HLA-B-253ENST00000481849 IGF1RP08069 1367 aa15.63■□□□□ 0.09
HLA-B-253ENST00000481849 KIF27Q86VH2 1401 aa15.63■□□□□ 0.09
HLA-B-253ENST00000481849 RUSC2Q8N2Y8 1516 aa15.6■□□□□ 0.09
HLA-B-253ENST00000481849 SPDYE4A6NLX3 237 aa15.59■□□□□ 0.09
HLA-B-253ENST00000481849 KIAA0586Q9BVV6 1533 aa15.55■□□□□ 0.08
HLA-B-253ENST00000481849 TTBK1Q5TCY1 1321 aaPredicted RBP15.55■□□□□ 0.08
HLA-B-253ENST00000481849 C19orf67A6NJJ6 358 aa15.55■□□□□ 0.08
HLA-B-253ENST00000481849 CARMIL1Q5VZK9 1371 aa15.54■□□□□ 0.08
HLA-B-253ENST00000481849 NPM1P06748 294 aaKnown RBP eCLIP15.54■□□□□ 0.08
HLA-B-253ENST00000481849 CUL7Q14999 1698 aa15.52■□□□□ 0.08
HLA-B-253ENST00000481849 FAM69CQ0P6D2 419 aa15.49■□□□□ 0.07
HLA-B-253ENST00000481849 STAG3Q9UJ98 1225 aa15.49■□□□□ 0.07
HLA-B-253ENST00000481849 ABCC10Q5T3U5 1492 aa15.47■□□□□ 0.07
HLA-B-253ENST00000481849 ADCY10Q96PN6 1610 aa15.45■□□□□ 0.06
HLA-B-253ENST00000481849 PTPRGP23470 1445 aa15.44■□□□□ 0.06
HLA-B-253ENST00000481849 CERKQ8TCT0 537 aa15.44■□□□□ 0.06
HLA-B-253ENST00000481849 FARP1Q9Y4F1 1045 aaPredicted RBP15.42■□□□□ 0.06
HLA-B-253ENST00000481849 CARMIL2Q6F5E8 1435 aa15.42■□□□□ 0.06
HLA-B-253ENST00000481849 DIP2BQ9P265 1576 aa15.41■□□□□ 0.06
HLA-B-253ENST00000481849 MAPKBP1O60336 1514 aa15.41■□□□□ 0.06
HLA-B-253ENST00000481849 TNIKQ9UKE5 1360 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms