RNA–Protein interactions for RNA: ENST00000481170.1

GMPPA-211, Transcript of GDP-mannose pyrophosphorylase A, humanhuman

TSL 2

Gene GMPPA, Length 4,942 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMPPA-211ENST00000481170 FKBP8Q14318 412 aa17.5■□□□□ 0.39
GMPPA-211ENST00000481170 ZBTB47Q9UFB7 747 aaPredicted RBP17.5■□□□□ 0.39
GMPPA-211ENST00000481170 SMARCA4P51532 1647 aa17.49■□□□□ 0.39
GMPPA-211ENST00000481170 RRP7BPQ9NSQ0 103 aa17.49■□□□□ 0.39
GMPPA-211ENST00000481170 TIMELESSQ9UNS1 1208 aa17.49■□□□□ 0.39
GMPPA-211ENST00000481170 TMC1Q8TDI8 760 aa17.45■□□□□ 0.38
GMPPA-211ENST00000481170 FAM9BQ8IZU0 186 aa17.45■□□□□ 0.38
GMPPA-211ENST00000481170 ANP32AP39687 249 aaKnown RBP17.44■□□□□ 0.38
GMPPA-211ENST00000481170 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.43■□□□□ 0.382e-7■■■□□ 16.9
GMPPA-211ENST00000481170 CFDP1Q9UEE9 299 aaPredicted RBP17.43■□□□□ 0.38
GMPPA-211ENST00000481170 ESF1Q9H501 851 aaKnown RBP17.43■□□□□ 0.38
GMPPA-211ENST00000481170 ATAD2BQ9ULI0 1458 aa17.42■□□□□ 0.38
GMPPA-211ENST00000481170 MRS2Q9HD23 443 aa17.42■□□□□ 0.38
GMPPA-211ENST00000481170 PDS5BQ9NTI5 1447 aa17.4■□□□□ 0.38
GMPPA-211ENST00000481170 CHGAP10645 457 aaKnown RBP17.4■□□□□ 0.38
GMPPA-211ENST00000481170 ERCC6Q03468 1493 aa17.37■□□□□ 0.37
GMPPA-211ENST00000481170 STAG3Q9UJ98 1225 aa17.36■□□□□ 0.37
GMPPA-211ENST00000481170 KDM2AQ9Y2K7 1162 aa17.36■□□□□ 0.37
GMPPA-211ENST00000481170 CADPSQ9ULU8 1353 aa17.35■□□□□ 0.37
GMPPA-211ENST00000481170 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.35■□□□□ 0.37
GMPPA-211ENST00000481170 ARHGAP35Q9NRY4 1499 aa17.34■□□□□ 0.37
GMPPA-211ENST00000481170 FMN1Q68DA7 1419 aa17.34■□□□□ 0.37
GMPPA-211ENST00000481170 SETD5Q9C0A6 1442 aa17.34■□□□□ 0.37
GMPPA-211ENST00000481170 WDR43Q15061 677 aaKnown RBP eCLIP17.32■□□□□ 0.36
GMPPA-211ENST00000481170 RAPGEF2Q9Y4G8 1499 aa17.29■□□□□ 0.36
GMPPA-211ENST00000481170 EIF4G1Q04637 1599 aaKnown RBP17.29■□□□□ 0.36
GMPPA-211ENST00000481170 CDCA8Q53HL2 280 aa17.28■□□□□ 0.36
GMPPA-211ENST00000481170 HIRIP3Q9BW71 556 aaPredicted RBP17.27■□□□□ 0.36
GMPPA-211ENST00000481170 CCDC136Q96JN2 1154 aa17.27■□□□□ 0.35
GMPPA-211ENST00000481170 KCNH8Q96L42 1107 aa17.25■□□□□ 0.35
GMPPA-211ENST00000481170 SIN3AQ96ST3 1273 aa17.24■□□□□ 0.35
GMPPA-211ENST00000481170 KANK4Q5T7N3 995 aaPredicted RBP17.23■□□□□ 0.35
GMPPA-211ENST00000481170 CARMIL2Q6F5E8 1435 aa17.21■□□□□ 0.35
GMPPA-211ENST00000481170 CARD11Q9BXL7 1154 aa17.2■□□□□ 0.34
GMPPA-211ENST00000481170 UPF2Q9HAU5 1272 aaKnown RBP17.19■□□□□ 0.34
GMPPA-211ENST00000481170 SLC24A1O60721 1099 aa17.18■□□□□ 0.34
GMPPA-211ENST00000481170 CCER2I3L3R5 266 aa17.16■□□□□ 0.34
GMPPA-211ENST00000481170 SALL2Q9Y467 1007 aaPredicted RBP17.15■□□□□ 0.34
GMPPA-211ENST00000481170 TDRD9Q8NDG6 1382 aaKnown RBP17.15■□□□□ 0.34
GMPPA-211ENST00000481170 RAB3GAP2Q9H2M9 1393 aa17.15■□□□□ 0.34
GMPPA-211ENST00000481170 NPM2Q86SE8 214 aaKnown RBP17.14■□□□□ 0.33
GMPPA-211ENST00000481170 RGL3Q3MIN7 710 aa17.14■□□□□ 0.33
GMPPA-211ENST00000481170 KNSTRNQ9Y448 316 aa17.11■□□□□ 0.33
GMPPA-211ENST00000481170 RUSC2Q8N2Y8 1516 aa17.09■□□□□ 0.33
GMPPA-211ENST00000481170 NCAPD3P42695 1498 aa17.09■□□□□ 0.33
GMPPA-211ENST00000481170 FANCD2Q9BXW9 1451 aa17.08■□□□□ 0.33
GMPPA-211ENST00000481170 CFAP53Q96M91 514 aa17.07■□□□□ 0.32
GMPPA-211ENST00000481170 KANK1Q14678 1352 aa17.06■□□□□ 0.32
GMPPA-211ENST00000481170 FHOD3Q2V2M9 1422 aa17.05■□□□□ 0.32
GMPPA-211ENST00000481170 CCDC18Q5T9S5 1454 aa17.04■□□□□ 0.32
GMPPA-211ENST00000481170 ANKRD30AQ9BXX3 1397 aa17.03■□□□□ 0.32
GMPPA-211ENST00000481170 PPP1R15AO75807 674 aaPredicted RBP17■□□□□ 0.31
GMPPA-211ENST00000481170 IRX6P78412 446 aaPredicted RBP17■□□□□ 0.31
GMPPA-211ENST00000481170 TMF1P82094 1093 aa17■□□□□ 0.31
GMPPA-211ENST00000481170 MPHOSPH9Q99550 1183 aa17■□□□□ 0.31
GMPPA-211ENST00000481170 RSPH4AQ5TD94 716 aa17■□□□□ 0.31
GMPPA-211ENST00000481170 PPP4R2Q9NY27 417 aa17■□□□□ 0.31
GMPPA-211ENST00000481170 SUPT16HQ9Y5B9 1047 aaKnown RBP16.99■□□□□ 0.31
GMPPA-211ENST00000481170 HSPA5P11021 654 aaKnown RBP16.99■□□□□ 0.31
GMPPA-211ENST00000481170 DCAF11Q8TEB1 546 aa16.98■□□□□ 0.31
GMPPA-211ENST00000481170 HSP90AA1P07900 732 aaKnown RBP16.98■□□□□ 0.31
GMPPA-211ENST00000481170 PKD2Q13563 968 aa16.97■□□□□ 0.31
GMPPA-211ENST00000481170 BCL11AQ9H165 835 aa16.97■□□□□ 0.31
GMPPA-211ENST00000481170 KIF21BO75037 1637 aa16.97■□□□□ 0.31
GMPPA-211ENST00000481170 IGF1RP08069 1367 aa16.96■□□□□ 0.31
GMPPA-211ENST00000481170 DHX57Q6P158 1386 aaKnown RBP16.96■□□□□ 0.31
GMPPA-211ENST00000481170 DDRGK1Q96HY6 314 aa16.95■□□□□ 0.3
GMPPA-211ENST00000481170 FGD5Q6ZNL6 1462 aa16.95■□□□□ 0.3
GMPPA-211ENST00000481170 ANP32EQ9BTT0 268 aa16.94■□□□□ 0.3
GMPPA-211ENST00000481170 MYH16Q9H6N6 1097 aa16.94■□□□□ 0.3
GMPPA-211ENST00000481170 ERICH3Q5RHP9 1530 aa16.93■□□□□ 0.3
GMPPA-211ENST00000481170 EFCAB2Q5VUJ9 269 aa16.93■□□□□ 0.3
GMPPA-211ENST00000481170 ERICH6BQ5W0A0 696 aa16.93■□□□□ 0.3
GMPPA-211ENST00000481170 ANP32BQ92688 251 aaKnown RBP16.92■□□□□ 0.3
GMPPA-211ENST00000481170 NUDCQ9Y266 331 aa16.91■□□□□ 0.3
GMPPA-211ENST00000481170 NUP155O75694 1391 aa16.91■□□□□ 0.3
GMPPA-211ENST00000481170 EIF5BO60841 1220 aaKnown RBP16.88■□□□□ 0.29
GMPPA-211ENST00000481170 NBR1Q14596 966 aa16.88■□□□□ 0.29
GMPPA-211ENST00000481170 GAPVD1Q14C86 1478 aa16.88■□□□□ 0.29
GMPPA-211ENST00000481170 BECN1Q14457 450 aa16.86■□□□□ 0.29
GMPPA-211ENST00000481170 CFTRP13569 1480 aa16.86■□□□□ 0.29
GMPPA-211ENST00000481170 JPH4Q96JJ6 628 aa16.86■□□□□ 0.29
GMPPA-211ENST00000481170 PNNQ9H307 717 aaKnown RBP16.86■□□□□ 0.29
GMPPA-211ENST00000481170 RALBP1Q15311 655 aa16.86■□□□□ 0.29
GMPPA-211ENST00000481170 KTN1Q86UP2 1357 aaKnown RBP16.85■□□□□ 0.29
GMPPA-211ENST00000481170 MS4A1P11836 297 aa16.85■□□□□ 0.29
GMPPA-211ENST00000481170 HMGXB3Q12766 1538 aa16.85■□□□□ 0.29
GMPPA-211ENST00000481170 ROCK2O75116 1388 aaKnown RBP16.84■□□□□ 0.29
GMPPA-211ENST00000481170 POGKQ9P215 609 aa16.84■□□□□ 0.29
GMPPA-211ENST00000481170 MAPK8IP3Q9UPT6 1336 aa16.84■□□□□ 0.29
GMPPA-211ENST00000481170 CUX1P39880 1505 aa16.84■□□□□ 0.29
GMPPA-211ENST00000481170 PLPPR3Q6T4P5 718 aa16.83■□□□□ 0.29
GMPPA-211ENST00000481170 CHMP4BQ9H444 224 aaKnown RBP16.83■□□□□ 0.28
GMPPA-211ENST00000481170 CC2D1BQ5T0F9 858 aaKnown RBP16.82■□□□□ 0.28
GMPPA-211ENST00000481170 L3MBTL2Q969R5 705 aa16.82■□□□□ 0.28
GMPPA-211ENST00000481170 HDGFP51858 240 aaKnown RBP16.81■□□□□ 0.28
GMPPA-211ENST00000481170 FOXD1Q16676 465 aa16.81■□□□□ 0.28
GMPPA-211ENST00000481170 SYNJ1O43426 1573 aa16.8■□□□□ 0.28
GMPPA-211ENST00000481170 TOP2BQ02880 1626 aa16.78■□□□□ 0.28
GMPPA-211ENST00000481170 EIF3AQ14152 1382 aaKnown RBP16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms