RNA–Protein interactions for RNA: ENST00000481118.1

LARP4B-208, Transcript of La ribonucleoprotein domain family member 4B, humanhuman

TSL 3

Gene LARP4B, Length 421 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4B-208ENST00000481118 SHROOM2Q13796 1616 aa22.3■■□□□ 1.16
LARP4B-208ENST00000481118 SPATA31D1Q6ZQQ2 1576 aa22.28■■□□□ 1.16
LARP4B-208ENST00000481118 FGD5Q6ZNL6 1462 aa22.26■■□□□ 1.15
LARP4B-208ENST00000481118 CCDC88BA6NC98 1476 aa22.24■■□□□ 1.15
LARP4B-208ENST00000481118 GRIN2AQ12879 1464 aa22.24■■□□□ 1.15
LARP4B-208ENST00000481118 NUP160Q12769 1436 aa22.21■■□□□ 1.15
LARP4B-208ENST00000481118 PRG4Q92954 1404 aaPredicted RBP22.19■■□□□ 1.14
LARP4B-208ENST00000481118 CERKQ8TCT0 537 aa22.17■■□□□ 1.14
LARP4B-208ENST00000481118 ADCY10Q96PN6 1610 aa22.12■■□□□ 1.13
LARP4B-208ENST00000481118 JPH4Q96JJ6 628 aa22.06■■□□□ 1.12
LARP4B-208ENST00000481118 COL17A1Q9UMD9 1497 aaPredicted RBP22.06■■□□□ 1.12
LARP4B-208ENST00000481118 PPRC1Q5VV67 1664 aaKnown RBP22.06■■□□□ 1.12
LARP4B-208ENST00000481118 ABCA5Q8WWZ7 1642 aa22■■□□□ 1.11
LARP4B-208ENST00000481118 ADAMTS12P58397 1594 aa21.97■■□□□ 1.11
LARP4B-208ENST00000481118 PCF11O94913 1555 aaKnown RBP21.95■■□□□ 1.1
LARP4B-208ENST00000481118 GLI2P10070 1586 aa21.95■■□□□ 1.1
LARP4B-208ENST00000481118 CUX1P39880 1505 aa21.92■■□□□ 1.1
LARP4B-208ENST00000481118 TEX14Q8IWB6 1497 aa21.92■■□□□ 1.1
LARP4B-208ENST00000481118 ABCA10Q8WWZ4 1543 aa21.9■■□□□ 1.1
LARP4B-208ENST00000481118 FHAD1B1AJZ9 1412 aa21.89■■□□□ 1.1
LARP4B-208ENST00000481118 PTPRMP28827 1452 aa21.89■■□□□ 1.09
LARP4B-208ENST00000481118 PLB1Q6P1J6 1458 aa21.86■■□□□ 1.09
LARP4B-208ENST00000481118 ASXL2Q76L83 1435 aa21.83■■□□□ 1.09
LARP4B-208ENST00000481118 KIF21BO75037 1637 aa21.78■■□□□ 1.08
LARP4B-208ENST00000481118 MAP3K4Q9Y6R4 1608 aa21.77■■□□□ 1.07
LARP4B-208ENST00000481118 HSPA2P54652 639 aa21.74■■□□□ 1.07
LARP4B-208ENST00000481118 ABCC2Q92887 1545 aa21.72■■□□□ 1.07
LARP4B-208ENST00000481118 ADAMTSL3P82987 1691 aa21.7■■□□□ 1.06
LARP4B-208ENST00000481118 RUSC2Q8N2Y8 1516 aa21.7■■□□□ 1.06
LARP4B-208ENST00000481118 KIAA0586Q9BVV6 1533 aa21.68■■□□□ 1.06
LARP4B-208ENST00000481118 EPRSP07814 1512 aaKnown RBP21.67■■□□□ 1.06
LARP4B-208ENST00000481118 PTPRGP23470 1445 aa21.63■■□□□ 1.05
LARP4B-208ENST00000481118 TTBK1Q5TCY1 1321 aaPredicted RBP21.61■■□□□ 1.05
LARP4B-208ENST00000481118 ERICH3Q5RHP9 1530 aa21.61■■□□□ 1.05
LARP4B-208ENST00000481118 CUL7Q14999 1698 aa21.61■■□□□ 1.05
LARP4B-208ENST00000481118 WRNQ14191 1432 aaPredicted RBP eCLIP21.53■■□□□ 1.04
LARP4B-208ENST00000481118 MADDQ8WXG6 1647 aa21.52■■□□□ 1.04
LARP4B-208ENST00000481118 DMRT2Q9Y5R5 561 aa21.51■■□□□ 1.03
LARP4B-208ENST00000481118 BCORL1Q5H9F3 1711 aa21.49■■□□□ 1.03
LARP4B-208ENST00000481118 ARID4BQ4LE39 1312 aaPredicted RBP21.48■■□□□ 1.03
LARP4B-208ENST00000481118 UHRF1BP1LA0JNW5 1464 aa21.46■■□□□ 1.03
LARP4B-208ENST00000481118 PLPPR3Q6T4P5 718 aa21.45■■□□□ 1.02
LARP4B-208ENST00000481118 MAGI3Q5TCQ9 1506 aa21.45■■□□□ 1.02
LARP4B-208ENST00000481118 TNIKQ9UKE5 1360 aa21.44■■□□□ 1.02
LARP4B-208ENST00000481118 CD109Q6YHK3 1445 aa21.42■■□□□ 1.02
LARP4B-208ENST00000481118 RIMS1Q86UR5 1692 aaKnown RBP21.42■■□□□ 1.02
LARP4B-208ENST00000481118 UACAQ9BZF9 1416 aa21.39■■□□□ 1.02
LARP4B-208ENST00000481118 KDM5BQ9UGL1 1544 aa21.38■■□□□ 1.01
LARP4B-208ENST00000481118 CARMIL2Q6F5E8 1435 aa21.38■■□□□ 1.01
LARP4B-208ENST00000481118 YEATS2Q9ULM3 1422 aa21.38■■□□□ 1.01
LARP4B-208ENST00000481118 IQSEC2Q5JU85 1478 aa21.36■■□□□ 1.01
LARP4B-208ENST00000481118 CFAP43Q8NDM7 1665 aa21.35■■□□□ 1.01
LARP4B-208ENST00000481118 ARAP3Q8WWN8 1544 aa21.33■■□□□ 1
LARP4B-208ENST00000481118 ZCCHC11Q5TAX3 1644 aaKnown RBP21.33■■□□□ 1
LARP4B-208ENST00000481118 WDR7Q9Y4E6 1490 aa21.32■■□□□ 1
LARP4B-208ENST00000481118 MED1Q15648 1581 aaPredicted RBP21.31■■□□□ 1
LARP4B-208ENST00000481118 PHF23Q9BUL5 403 aaPredicted RBP21.31■■□□□ 1
LARP4B-208ENST00000481118 KCNH8Q96L42 1107 aa21.25■□□□□ 0.99
LARP4B-208ENST00000481118 STRCQ7RTU9 1775 aa21.23■□□□□ 0.99
LARP4B-208ENST00000481118 UBAP1LF5GYI3 381 aa21.23■□□□□ 0.99
LARP4B-208ENST00000481118 LTBP4Q8N2S1 1624 aa21.19■□□□□ 0.98
LARP4B-208ENST00000481118 PTPRTO14522 1441 aa21.19■□□□□ 0.98
LARP4B-208ENST00000481118 RAPGEF3O95398 923 aa21.17■□□□□ 0.98
LARP4B-208ENST00000481118 PHLDB1Q86UU1 1377 aa21.17■□□□□ 0.98
LARP4B-208ENST00000481118 POGZQ7Z3K3 1410 aa21.17■□□□□ 0.98
LARP4B-208ENST00000481118 PREX1Q8TCU6 1659 aa21.17■□□□□ 0.98
LARP4B-208ENST00000481118 BIVM-ERCC5R4GMW8 1640 aa21.12■□□□□ 0.97
LARP4B-208ENST00000481118 HSPA1LP34931 641 aa21.06■□□□□ 0.96
LARP4B-208ENST00000481118 FANCAO15360 1455 aa21.06■□□□□ 0.96
LARP4B-208ENST00000481118 TTC37Q6PGP7 1564 aa21.05■□□□□ 0.96
LARP4B-208ENST00000481118 UHRF1BP1Q6BDS2 1440 aa21.03■□□□□ 0.96
LARP4B-208ENST00000481118 FER1L4A9Z1Z3 1794 aa21.02■□□□□ 0.96
LARP4B-208ENST00000481118 SCAF1Q9H7N4 1312 aaKnown RBP21.02■□□□□ 0.95
LARP4B-208ENST00000481118 ARHGEF40Q8TER5 1519 aa21.01■□□□□ 0.95
LARP4B-208ENST00000481118 MLECQ14165 292 aa21■□□□□ 0.95
LARP4B-208ENST00000481118 IQGAP2Q13576 1575 aa20.99■□□□□ 0.95
LARP4B-208ENST00000481118 DISP1Q96F81 1524 aa20.98■□□□□ 0.95
LARP4B-208ENST00000481118 FRMPD1Q5SYB0 1578 aa20.96■□□□□ 0.95
LARP4B-208ENST00000481118 NEO1Q92859 1461 aa20.94■□□□□ 0.94
LARP4B-208ENST00000481118 AKNAQ7Z591 1439 aa20.94■□□□□ 0.94
LARP4B-208ENST00000481118 CEBPAP49715 358 aaPredicted RBP20.92■□□□□ 0.94
LARP4B-208ENST00000481118 PIP4K2BP78356 416 aa20.91■□□□□ 0.94
LARP4B-208ENST00000481118 SETD1BQ9UPS6 1966 aaKnown RBP20.91■□□□□ 0.94
LARP4B-208ENST00000481118 IGF1RP08069 1367 aa20.9■□□□□ 0.94
LARP4B-208ENST00000481118 ZNF335Q9H4Z2 1342 aaPredicted RBP20.85■□□□□ 0.93
LARP4B-208ENST00000481118 TOM1O60784 492 aa20.85■□□□□ 0.93
LARP4B-208ENST00000481118 ABCA9Q8IUA7 1624 aa20.82■□□□□ 0.92
LARP4B-208ENST00000481118 SIGLEC1Q9BZZ2 1709 aa20.81■□□□□ 0.92
LARP4B-208ENST00000481118 DENND4BO75064 1496 aaPredicted RBP20.81■□□□□ 0.92
LARP4B-208ENST00000481118 KIAA0556O60303 1618 aa20.8■□□□□ 0.92
LARP4B-208ENST00000481118 NCOA1Q15788 1441 aa20.79■□□□□ 0.92
LARP4B-208ENST00000481118 ARHGEF12Q9NZN5 1544 aa20.78■□□□□ 0.92
LARP4B-208ENST00000481118 EFCAB5A4FU69 1503 aa20.78■□□□□ 0.92
LARP4B-208ENST00000481118 ZFYVE16Q7Z3T8 1539 aa20.77■□□□□ 0.92
LARP4B-208ENST00000481118 UGGT2Q9NYU1 1516 aa20.77■□□□□ 0.92
LARP4B-208ENST00000481118 RICTORQ6R327 1708 aa20.76■□□□□ 0.91
LARP4B-208ENST00000481118 CARMIL1Q5VZK9 1371 aa20.76■□□□□ 0.91
LARP4B-208ENST00000481118 RGS17Q9UGC6 210 aaPredicted RBP20.76■□□□□ 0.91
LARP4B-208ENST00000481118 FHOD3Q2V2M9 1422 aa20.74■□□□□ 0.91
LARP4B-208ENST00000481118 KIF27Q86VH2 1401 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms