RNA–Protein interactions for RNA: ENST00000480683.2

KCNMA1-219, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 1 (best) BASIC

Gene KCNMA1, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-219ENST00000480683 DHX57Q6P158 1386 aaKnown RBP22.19■■□□□ 1.14
KCNMA1-219ENST00000480683 SYNJ1O43426 1573 aa22.19■■□□□ 1.14
KCNMA1-219ENST00000480683 VPS8Q8N3P4 1428 aa22.18■■□□□ 1.14
KCNMA1-219ENST00000480683 CLSPNQ9HAW4 1339 aa22.17■■□□□ 1.14
KCNMA1-219ENST00000480683 CEP164Q9UPV0 1460 aa22.15■■□□□ 1.14
KCNMA1-219ENST00000480683 ARID3CA6NKF2 412 aa22.14■■□□□ 1.13
KCNMA1-219ENST00000480683 PRKCSHP14314 528 aaPredicted RBP22.13■■□□□ 1.13
KCNMA1-219ENST00000480683 MRC2Q9UBG0 1479 aa22.13■■□□□ 1.13
KCNMA1-219ENST00000480683 EEA1Q15075 1411 aa22.05■■□□□ 1.12
KCNMA1-219ENST00000480683 FANCD2Q9BXW9 1451 aa22.04■■□□□ 1.12
KCNMA1-219ENST00000480683 WDR62O43379 1518 aa22.04■■□□□ 1.12
KCNMA1-219ENST00000480683 KIF21BO75037 1637 aa22.03■■□□□ 1.12
KCNMA1-219ENST00000480683 CFTRP13569 1480 aa21.98■■□□□ 1.11
KCNMA1-219ENST00000480683 ARAP1Q96P48 1450 aa21.95■■□□□ 1.1
KCNMA1-219ENST00000480683 RAB3GAP2Q9H2M9 1393 aa21.94■■□□□ 1.1
KCNMA1-219ENST00000480683 NEFLP07196 543 aa21.93■■□□□ 1.1
KCNMA1-219ENST00000480683 CHIC2Q9UKJ5 165 aa21.89■■□□□ 1.1
KCNMA1-219ENST00000480683 CCNB3Q8WWL7 1395 aa21.89■■□□□ 1.09
KCNMA1-219ENST00000480683 ERICH6Q7L0X2 663 aa21.87■■□□□ 1.09
KCNMA1-219ENST00000480683 POLR3GLQ9BT43 218 aa21.85■■□□□ 1.09
KCNMA1-219ENST00000480683 URB2Q14146 1524 aaKnown RBP21.85■■□□□ 1.09
KCNMA1-219ENST00000480683 FOXD1Q16676 465 aa21.79■■□□□ 1.08
KCNMA1-219ENST00000480683 ANO8Q9HCE9 1232 aaPredicted RBP21.79■■□□□ 1.08
KCNMA1-219ENST00000480683 HNRNPUQ00839 825 aaKnown RBP eCLIP21.78■■□□□ 1.08
KCNMA1-219ENST00000480683 ANP32CO43423 234 aa21.77■■□□□ 1.08
KCNMA1-219ENST00000480683 DEKP35659 375 aaKnown RBP21.75■■□□□ 1.07
KCNMA1-219ENST00000480683 NBR1Q14596 966 aa21.73■■□□□ 1.07
KCNMA1-219ENST00000480683 RRP7BPQ9NSQ0 103 aa21.73■■□□□ 1.07
KCNMA1-219ENST00000480683 PHLDB1Q86UU1 1377 aa21.72■■□□□ 1.07
KCNMA1-219ENST00000480683 OSCARQ8IYS5 282 aa21.72■■□□□ 1.07
KCNMA1-219ENST00000480683 PRDM2Q13029 1718 aa21.71■■□□□ 1.07
KCNMA1-219ENST00000480683 FAM9BQ8IZU0 186 aa21.7■■□□□ 1.06
KCNMA1-219ENST00000480683 CCDC184Q52MB2 194 aa21.66■■□□□ 1.06
KCNMA1-219ENST00000480683 WDR97A6NE52 1622 aa21.66■■□□□ 1.06
KCNMA1-219ENST00000480683 ARHGAP35Q9NRY4 1499 aa21.65■■□□□ 1.06
KCNMA1-219ENST00000480683 KIF27Q86VH2 1401 aa21.63■■□□□ 1.05
KCNMA1-219ENST00000480683 CDK11AQ9UQ88 783 aaPredicted RBP21.63■■□□□ 1.05
KCNMA1-219ENST00000480683 PPP1R15AO75807 674 aaPredicted RBP21.62■■□□□ 1.05
KCNMA1-219ENST00000480683 ZNF608Q9ULD9 1512 aaPredicted RBP21.62■■□□□ 1.05
KCNMA1-219ENST00000480683 ZNF326Q5BKZ1 582 aaKnown RBP21.61■■□□□ 1.05
KCNMA1-219ENST00000480683 CCDC136Q96JN2 1154 aa21.61■■□□□ 1.05
KCNMA1-219ENST00000480683 TOPBP1Q92547 1522 aa21.61■■□□□ 1.05
KCNMA1-219ENST00000480683 PRXQ9BXM0 1461 aa21.59■■□□□ 1.05
KCNMA1-219ENST00000480683 IFT140Q96RY7 1462 aa21.59■■□□□ 1.05
KCNMA1-219ENST00000480683 FHOD3Q2V2M9 1422 aa21.58■■□□□ 1.05
KCNMA1-219ENST00000480683 SETD5Q9C0A6 1442 aa21.58■■□□□ 1.05
KCNMA1-219ENST00000480683 FANCIQ9NVI1 1328 aa21.58■■□□□ 1.05
KCNMA1-219ENST00000480683 TOP2BQ02880 1626 aa21.57■■□□□ 1.04
KCNMA1-219ENST00000480683 SALL2Q9Y467 1007 aaPredicted RBP21.57■■□□□ 1.04
KCNMA1-219ENST00000480683 TONSLQ96HA7 1378 aa21.56■■□□□ 1.04
KCNMA1-219ENST00000480683 RTN4Q9NQC3 1192 aaKnown RBP21.56■■□□□ 1.04
KCNMA1-219ENST00000480683 CUX1P39880 1505 aa21.56■■□□□ 1.04
KCNMA1-219ENST00000480683 B4GALNT3Q6L9W6 998 aa21.55■■□□□ 1.04
KCNMA1-219ENST00000480683 IGF1RP08069 1367 aa21.54■■□□□ 1.04
KCNMA1-219ENST00000480683 CARMIL1Q5VZK9 1371 aa21.54■■□□□ 1.04
KCNMA1-219ENST00000480683 RRBP1Q9P2E9 1410 aaKnown RBP21.54■■□□□ 1.04
KCNMA1-219ENST00000480683 PAK3O75914 559 aaPredicted RBP21.53■■□□□ 1.04
KCNMA1-219ENST00000480683 MAPKBP1O60336 1514 aa21.51■■□□□ 1.03
KCNMA1-219ENST00000480683 DNMBPQ6XZF7 1577 aa21.5■■□□□ 1.03
KCNMA1-219ENST00000480683 EIF4G3O43432 1585 aaKnown RBP21.45■■□□□ 1.03
KCNMA1-219ENST00000480683 AQRO60306 1485 aaKnown RBP eCLIP21.44■■□□□ 1.02
KCNMA1-219ENST00000480683 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.43■■□□□ 1.02
KCNMA1-219ENST00000480683 HSPA5P11021 654 aaKnown RBP21.42■■□□□ 1.02
KCNMA1-219ENST00000480683 IL27Q8NEV9 243 aa21.42■■□□□ 1.02
KCNMA1-219ENST00000480683 FBLN2P98095 1184 aa21.41■■□□□ 1.02
KCNMA1-219ENST00000480683 C11orf95C9JLR9 678 aaPredicted RBP21.41■■□□□ 1.02
KCNMA1-219ENST00000480683 BIVM-ERCC5R4GMW8 1640 aa21.39■■□□□ 1.02
KCNMA1-219ENST00000480683 POLA1P09884 1462 aaPredicted RBP21.39■■□□□ 1.01
KCNMA1-219ENST00000480683 RAD54L2Q9Y4B4 1467 aa21.39■■□□□ 1.01
KCNMA1-219ENST00000480683 RIMBP3CA6NJZ7 1639 aa21.38■■□□□ 1.01
KCNMA1-219ENST00000480683 RIMBP3BA6NNM3 1639 aa21.38■■□□□ 1.01
KCNMA1-219ENST00000480683 RIMBP3Q9UFD9 1639 aa21.38■■□□□ 1.01
KCNMA1-219ENST00000480683 MTUS2Q5JR59 1369 aa21.37■■□□□ 1.01
KCNMA1-219ENST00000480683 TARBP1Q13395 1621 aaKnown RBP21.37■■□□□ 1.01
KCNMA1-219ENST00000480683 MRS2Q9HD23 443 aa21.36■■□□□ 1.01
KCNMA1-219ENST00000480683 CCER2I3L3R5 266 aa21.36■■□□□ 1.01
KCNMA1-219ENST00000480683 TDRD9Q8NDG6 1382 aaKnown RBP21.34■■□□□ 1.01
KCNMA1-219ENST00000480683 NOP58Q9Y2X3 529 aaKnown RBP21.34■■□□□ 1.01
KCNMA1-219ENST00000480683 LRRC9Q6ZRR7 1453 aa21.34■■□□□ 1.01
KCNMA1-219ENST00000480683 WASHC2AQ641Q2 1341 aa21.33■■□□□ 1.01
KCNMA1-219ENST00000480683 ARHGEF11O15085 1522 aa21.33■■□□□ 1
KCNMA1-219ENST00000480683 CHD1O14646 1710 aa21.3■■□□□ 1
KCNMA1-219ENST00000480683 ZNF777Q9ULD5 760 aaPredicted RBP21.3■■□□□ 1
KCNMA1-219ENST00000480683 PTPRKQ15262 1439 aa21.29■■□□□ 1
KCNMA1-219ENST00000480683 L3MBTL2Q969R5 705 aa21.28■■□□□ 1
KCNMA1-219ENST00000480683 CYB5RLQ6IPT4 315 aa21.28■■□□□ 1
KCNMA1-219ENST00000480683 FGD5Q6ZNL6 1462 aa21.27■■□□□ 1
KCNMA1-219ENST00000480683 ERICH3Q5RHP9 1530 aa21.26■□□□□ 0.99
KCNMA1-219ENST00000480683 PPP4R2Q9NY27 417 aa21.25■□□□□ 0.99
KCNMA1-219ENST00000480683 NPM2Q86SE8 214 aaKnown RBP21.24■□□□□ 0.99
KCNMA1-219ENST00000480683 ZNF644Q9H582 1327 aaPredicted RBP21.23■□□□□ 0.99
KCNMA1-219ENST00000480683 KDM2AQ9Y2K7 1162 aa21.2■□□□□ 0.98
KCNMA1-219ENST00000480683 SNAPC4Q5SXM2 1469 aa21.2■□□□□ 0.98
KCNMA1-219ENST00000480683 EIF4G2P78344 907 aaKnown RBP eCLIP21.2■□□□□ 0.98
KCNMA1-219ENST00000480683 TIAM1Q13009 1591 aa21.19■□□□□ 0.98
KCNMA1-219ENST00000480683 CHMP7Q8WUX9 453 aaPredicted RBP21.18■□□□□ 0.98
KCNMA1-219ENST00000480683 NBPF8Q3BBV2 869 aa21.17■□□□□ 0.98
KCNMA1-219ENST00000480683 MYT1LQ9UL68 1186 aa21.16■□□□□ 0.98
KCNMA1-219ENST00000480683 SKAP1Q86WV1 359 aa21.15■□□□□ 0.98
KCNMA1-219ENST00000480683 RTL5Q5HYW3 569 aaPredicted RBP21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms