RNA–Protein interactions for RNA: ENST00000480683.2

KCNMA1-219, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 1 (best) BASIC

Gene KCNMA1, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-219ENST00000480683 NISCHQ9Y2I1 1504 aa29.58■■■□□ 2.33
KCNMA1-219ENST00000480683 SHROOM4Q9ULL8 1493 aa27.35■■□□□ 1.97
KCNMA1-219ENST00000480683 SUPT5HO00267 1087 aaKnown RBP27.04■■□□□ 1.92
KCNMA1-219ENST00000480683 DCAF8L2P0C7V8 631 aa26.62■■□□□ 1.85
KCNMA1-219ENST00000480683 ABCC9O60706 1549 aa26.41■■□□□ 1.82
KCNMA1-219ENST00000480683 CCDC180Q9P1Z9 1646 aa26.21■■□□□ 1.79
KCNMA1-219ENST00000480683 HRCP23327 699 aa26.15■■□□□ 1.78
KCNMA1-219ENST00000480683 PPARGC1BQ86YN6 1023 aaKnown RBP26.13■■□□□ 1.77
KCNMA1-219ENST00000480683 PCGF6Q9BYE7 350 aa26.03■■□□□ 1.76
KCNMA1-219ENST00000480683 EHMT2Q96KQ7 1210 aa25.8■■□□□ 1.72
KCNMA1-219ENST00000480683 LOC105371045A0A1W2PR82 267 aa25.7■■□□□ 1.7
KCNMA1-219ENST00000480683 CHIC1Q5VXU3 224 aa25.66■■□□□ 1.7
KCNMA1-219ENST00000480683 MYO15BQ96JP2 1530 aa25.64■■□□□ 1.69
KCNMA1-219ENST00000480683 FAM9AQ8IZU1 332 aaPredicted RBP25.29■■□□□ 1.64
KCNMA1-219ENST00000480683 SCAF1Q9H7N4 1312 aaKnown RBP25.05■■□□□ 1.6
KCNMA1-219ENST00000480683 RB1CC1Q8TDY2 1594 aa25.02■■□□□ 1.6
KCNMA1-219ENST00000480683 PELP1Q8IZL8 1130 aaKnown RBP24.99■■□□□ 1.59
KCNMA1-219ENST00000480683 ZCCHC6Q5VYS8 1495 aaKnown RBP24.97■■□□□ 1.59
KCNMA1-219ENST00000480683 TTBK1Q5TCY1 1321 aaPredicted RBP24.89■■□□□ 1.57
KCNMA1-219ENST00000480683 NACADO15069 1562 aa24.81■■□□□ 1.56
KCNMA1-219ENST00000480683 DNAJC5BQ9UF47 199 aa24.78■■□□□ 1.56
KCNMA1-219ENST00000480683 PABPN1Q86U42 306 aaKnown RBP eCLIP24.65■■□□□ 1.54
KCNMA1-219ENST00000480683 TRIM26Q12899 539 aaPredicted RBP24.61■■□□□ 1.53
KCNMA1-219ENST00000480683 TRIM41Q8WV44 630 aa24.59■■□□□ 1.53
KCNMA1-219ENST00000480683 DCAF1Q9Y4B6 1507 aa24.5■■□□□ 1.51
KCNMA1-219ENST00000480683 UNC13AQ9UPW8 1703 aa24.45■■□□□ 1.5
KCNMA1-219ENST00000480683 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.36■■□□□ 1.49
KCNMA1-219ENST00000480683 NEUROD1Q13562 356 aa24.33■■□□□ 1.49
KCNMA1-219ENST00000480683 BICRAQ9NZM4 1560 aa24.28■■□□□ 1.48
KCNMA1-219ENST00000480683 GTF3C3Q9Y5Q9 886 aa24.2■■□□□ 1.46
KCNMA1-219ENST00000480683 ZEB1P37275 1124 aaPredicted RBP24.19■■□□□ 1.46
KCNMA1-219ENST00000480683 ACIN1Q9UKV3 1341 aaKnown RBP24.18■■□□□ 1.46
KCNMA1-219ENST00000480683 CCER1Q8TC90 406 aaPredicted RBP24.08■■□□□ 1.45
KCNMA1-219ENST00000480683 SCRIBQ14160 1630 aa24.03■■□□□ 1.44
KCNMA1-219ENST00000480683 RANGAP1P46060 587 aaPredicted RBP24.01■■□□□ 1.43
KCNMA1-219ENST00000480683 YTHDC1Q96MU7 727 aaKnown RBP23.95■■□□□ 1.43
KCNMA1-219ENST00000480683 RSF1Q96T23 1441 aaPredicted RBP23.86■■□□□ 1.41
KCNMA1-219ENST00000480683 MYT1Q01538 1121 aa23.86■■□□□ 1.41
KCNMA1-219ENST00000480683 CC2D2AQ9P2K1 1620 aa23.78■■□□□ 1.4
KCNMA1-219ENST00000480683 DIEXFQ68CQ4 756 aaKnown RBP23.78■■□□□ 1.4
KCNMA1-219ENST00000480683 CECR2Q9BXF3 1484 aa23.75■■□□□ 1.39
KCNMA1-219ENST00000480683 CENPBP07199 599 aaPredicted RBP23.72■■□□□ 1.39
KCNMA1-219ENST00000480683 EIF4G1Q04637 1599 aaKnown RBP23.72■■□□□ 1.39
KCNMA1-219ENST00000480683 UBTFP17480 764 aaKnown RBP23.62■■□□□ 1.37
KCNMA1-219ENST00000480683 HNRNPUL2Q1KMD3 747 aaKnown RBP23.61■■□□□ 1.37
KCNMA1-219ENST00000480683 MROH2BQ7Z745 1585 aa23.33■■□□□ 1.33
KCNMA1-219ENST00000480683 MIER1Q8N108 512 aa23.28■■□□□ 1.32
KCNMA1-219ENST00000480683 ABCC8Q09428 1581 aa23.22■■□□□ 1.31
KCNMA1-219ENST00000480683 SOGA1O94964 1423 aa23.2■■□□□ 1.3
KCNMA1-219ENST00000480683 WIZO95785 1651 aa23.2■■□□□ 1.3
KCNMA1-219ENST00000480683 CCDC88BA6NC98 1476 aa23.16■■□□□ 1.3
KCNMA1-219ENST00000480683 ZNF316A6NFI3 1004 aaPredicted RBP23.16■■□□□ 1.3
KCNMA1-219ENST00000480683 ITGAEP38570 1179 aa23.13■■□□□ 1.29
KCNMA1-219ENST00000480683 RUSC2Q8N2Y8 1516 aa23.13■■□□□ 1.29
KCNMA1-219ENST00000480683 CSRNP3Q8WYN3 585 aa23.04■■□□□ 1.28
KCNMA1-219ENST00000480683 BCL11AQ9H165 835 aa23.03■■□□□ 1.28
KCNMA1-219ENST00000480683 CEP162Q5TB80 1403 aa23.02■■□□□ 1.28
KCNMA1-219ENST00000480683 APLP2Q06481 763 aa22.95■■□□□ 1.26
KCNMA1-219ENST00000480683 NCAPD3P42695 1498 aa22.92■■□□□ 1.26
KCNMA1-219ENST00000480683 ATAD2BQ9ULI0 1458 aa22.89■■□□□ 1.25
KCNMA1-219ENST00000480683 SUPT16HQ9Y5B9 1047 aaKnown RBP22.88■■□□□ 1.25
KCNMA1-219ENST00000480683 SMARCA4P51532 1647 aa22.85■■□□□ 1.25
KCNMA1-219ENST00000480683 TSHZ2Q9NRE2 1034 aa22.83■■□□□ 1.25
KCNMA1-219ENST00000480683 BCANQ96GW7 911 aa22.82■■□□□ 1.24
KCNMA1-219ENST00000480683 ANP32EQ9BTT0 268 aa22.82■■□□□ 1.24
KCNMA1-219ENST00000480683 ERCC6Q03468 1493 aa22.81■■□□□ 1.24
KCNMA1-219ENST00000480683 SMARCA2P51531 1590 aa22.8■■□□□ 1.24
KCNMA1-219ENST00000480683 KCNH8Q96L42 1107 aa22.76■■□□□ 1.23
KCNMA1-219ENST00000480683 HIRIP3Q9BW71 556 aaPredicted RBP22.76■■□□□ 1.23
KCNMA1-219ENST00000480683 HMGXB3Q12766 1538 aa22.73■■□□□ 1.23
KCNMA1-219ENST00000480683 BAZ1AQ9NRL2 1556 aaPredicted RBP22.73■■□□□ 1.23
KCNMA1-219ENST00000480683 ATP1B4Q9UN42 357 aaPredicted RBP22.73■■□□□ 1.23
KCNMA1-219ENST00000480683 DNAJC5Q9H3Z4 198 aa22.72■■□□□ 1.23
KCNMA1-219ENST00000480683 BAZ1BQ9UIG0 1483 aaKnown RBP22.7■■□□□ 1.22
KCNMA1-219ENST00000480683 NESP48681 1621 aa22.67■■□□□ 1.22
KCNMA1-219ENST00000480683 CUX2O14529 1486 aa22.65■■□□□ 1.22
KCNMA1-219ENST00000480683 KANK4Q5T7N3 995 aaPredicted RBP22.62■■□□□ 1.21
KCNMA1-219ENST00000480683 TNIKQ9UKE5 1360 aa22.61■■□□□ 1.21
KCNMA1-219ENST00000480683 PEG3Q9GZU2 1588 aa22.55■■□□□ 1.2
KCNMA1-219ENST00000480683 P3H3Q8IVL6 736 aa22.54■■□□□ 1.2
KCNMA1-219ENST00000480683 CLIP1P30622 1438 aa22.53■■□□□ 1.2
KCNMA1-219ENST00000480683 TOP2AP11388 1531 aaKnown RBP22.46■■□□□ 1.19
KCNMA1-219ENST00000480683 WRNQ14191 1432 aaPredicted RBP eCLIP22.46■■□□□ 1.19
KCNMA1-219ENST00000480683 RAPGEF2Q9Y4G8 1499 aa22.41■■□□□ 1.18
KCNMA1-219ENST00000480683 LAMC3Q9Y6N6 1575 aa22.41■■□□□ 1.18
KCNMA1-219ENST00000480683 GOLGA3Q08378 1498 aa22.4■■□□□ 1.18
KCNMA1-219ENST00000480683 DDX10Q13206 875 aaKnown RBP22.4■■□□□ 1.18
KCNMA1-219ENST00000480683 CNGB1Q14028 1251 aaPredicted RBP22.39■■□□□ 1.17
KCNMA1-219ENST00000480683 SIN3AQ96ST3 1273 aa22.38■■□□□ 1.17
KCNMA1-219ENST00000480683 TRIM52Q96A61 297 aa22.36■■□□□ 1.17
KCNMA1-219ENST00000480683 FKBP8Q14318 412 aa22.35■■□□□ 1.17
KCNMA1-219ENST00000480683 FAM50AQ14320 339 aaKnown RBP22.35■■□□□ 1.17
KCNMA1-219ENST00000480683 THOC2Q8NI27 1593 aaKnown RBP22.35■■□□□ 1.17
KCNMA1-219ENST00000480683 PDS5BQ9NTI5 1447 aa22.33■■□□□ 1.17
KCNMA1-219ENST00000480683 KIF21AQ7Z4S6 1674 aa22.32■■□□□ 1.16
KCNMA1-219ENST00000480683 RBM19Q9Y4C8 960 aaKnown RBP22.28■■□□□ 1.16
KCNMA1-219ENST00000480683 CADPSQ9ULU8 1353 aa22.27■■□□□ 1.16
KCNMA1-219ENST00000480683 SENP3-EIF4A1A0A087X0R7 540 aa22.26■■□□□ 1.15
KCNMA1-219ENST00000480683 IRX6P78412 446 aaPredicted RBP22.24■■□□□ 1.15
KCNMA1-219ENST00000480683 MSH5O43196 834 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms