RNA–Protein interactions for RNA: ENST00000478848.1

FMR1-211, Transcript of fragile X mental retardation 1, humanhuman

TSL 2

Gene FMR1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-211ENST00000478848 MAPKBP1O60336 1514 aa16.45■□□□□ 0.22
FMR1-211ENST00000478848 PBRM1Q86U86 1689 aa16.43■□□□□ 0.22
FMR1-211ENST00000478848 GRIN2AQ12879 1464 aa16.42■□□□□ 0.22
FMR1-211ENST00000478848 SHROOM2Q13796 1616 aa16.4■□□□□ 0.22
FMR1-211ENST00000478848 NUP160Q12769 1436 aa16.38■□□□□ 0.21
FMR1-211ENST00000478848 PRG4Q92954 1404 aaPredicted RBP16.38■□□□□ 0.21
FMR1-211ENST00000478848 PHF23Q9BUL5 403 aaPredicted RBP16.3■□□□□ 0.2
FMR1-211ENST00000478848 ADCY10Q96PN6 1610 aa16.3■□□□□ 0.2
FMR1-211ENST00000478848 CUX1P39880 1505 aa16.29■□□□□ 0.2
FMR1-211ENST00000478848 JPH4Q96JJ6 628 aa16.29■□□□□ 0.2
FMR1-211ENST00000478848 COL17A1Q9UMD9 1497 aaPredicted RBP16.27■□□□□ 0.19
FMR1-211ENST00000478848 ABCA5Q8WWZ7 1642 aa16.26■□□□□ 0.19
FMR1-211ENST00000478848 ADAMTS12P58397 1594 aa16.23■□□□□ 0.19
FMR1-211ENST00000478848 SENP3Q9H4L4 574 aaPredicted RBP16.23■□□□□ 0.19
FMR1-211ENST00000478848 TOP2BQ02880 1626 aa16.23■□□□□ 0.19
FMR1-211ENST00000478848 ABCA10Q8WWZ4 1543 aa16.2■□□□□ 0.18
FMR1-211ENST00000478848 PPRC1Q5VV67 1664 aaKnown RBP16.2■□□□□ 0.18
FMR1-211ENST00000478848 CERKQ8TCT0 537 aa16.17■□□□□ 0.18
FMR1-211ENST00000478848 FHAD1B1AJZ9 1412 aa16.17■□□□□ 0.18
FMR1-211ENST00000478848 SPATA31D1Q6ZQQ2 1576 aa16.14■□□□□ 0.17
FMR1-211ENST00000478848 ASXL2Q76L83 1435 aa16.1■□□□□ 0.17
FMR1-211ENST00000478848 TTBK1Q5TCY1 1321 aaPredicted RBP16.09■□□□□ 0.17
FMR1-211ENST00000478848 GLI2P10070 1586 aa16.09■□□□□ 0.17
FMR1-211ENST00000478848 PLB1Q6P1J6 1458 aa16.05■□□□□ 0.16
FMR1-211ENST00000478848 PTPRMP28827 1452 aa16.03■□□□□ 0.16
FMR1-211ENST00000478848 TEX14Q8IWB6 1497 aa16.03■□□□□ 0.16
FMR1-211ENST00000478848 PCF11O94913 1555 aaKnown RBP16.02■□□□□ 0.16
FMR1-211ENST00000478848 RUSC2Q8N2Y8 1516 aa16.02■□□□□ 0.15
FMR1-211ENST00000478848 HSPA2P54652 639 aa16■□□□□ 0.15
FMR1-211ENST00000478848 ABCC2Q92887 1545 aa15.99■□□□□ 0.15
FMR1-211ENST00000478848 PTPRGP23470 1445 aa15.99■□□□□ 0.15
FMR1-211ENST00000478848 KIF21BO75037 1637 aa15.98■□□□□ 0.15
FMR1-211ENST00000478848 WRNQ14191 1432 aaPredicted RBP eCLIP15.97■□□□□ 0.15
FMR1-211ENST00000478848 MAP3K4Q9Y6R4 1608 aa15.97■□□□□ 0.15
FMR1-211ENST00000478848 EPRSP07814 1512 aaKnown RBP15.96■□□□□ 0.15
FMR1-211ENST00000478848 ERICH3Q5RHP9 1530 aa15.96■□□□□ 0.15
FMR1-211ENST00000478848 CUL7Q14999 1698 aa15.9■□□□□ 0.14
FMR1-211ENST00000478848 ADAMTSL3P82987 1691 aa15.88■□□□□ 0.13
FMR1-211ENST00000478848 KIAA0586Q9BVV6 1533 aa15.86■□□□□ 0.13
FMR1-211ENST00000478848 PLPPR3Q6T4P5 718 aa15.85■□□□□ 0.13
FMR1-211ENST00000478848 TNIKQ9UKE5 1360 aa15.83■□□□□ 0.12
FMR1-211ENST00000478848 UHRF1BP1LA0JNW5 1464 aa15.81■□□□□ 0.12
FMR1-211ENST00000478848 ARID4BQ4LE39 1312 aaPredicted RBP15.81■□□□□ 0.12
FMR1-211ENST00000478848 UACAQ9BZF9 1416 aa15.79■□□□□ 0.12
FMR1-211ENST00000478848 MADDQ8WXG6 1647 aa15.79■□□□□ 0.12
FMR1-211ENST00000478848 CD109Q6YHK3 1445 aa15.77■□□□□ 0.12
FMR1-211ENST00000478848 KDM5BQ9UGL1 1544 aa15.76■□□□□ 0.11
FMR1-211ENST00000478848 CARMIL2Q6F5E8 1435 aa15.76■□□□□ 0.11
FMR1-211ENST00000478848 MAGI3Q5TCQ9 1506 aa15.75■□□□□ 0.11
FMR1-211ENST00000478848 KCNH8Q96L42 1107 aa15.74■□□□□ 0.11
FMR1-211ENST00000478848 WDR7Q9Y4E6 1490 aa15.72■□□□□ 0.11
FMR1-211ENST00000478848 BCORL1Q5H9F3 1711 aa15.72■□□□□ 0.11
FMR1-211ENST00000478848 ZCCHC11Q5TAX3 1644 aaKnown RBP15.72■□□□□ 0.11
FMR1-211ENST00000478848 RIMS1Q86UR5 1692 aaKnown RBP15.71■□□□□ 0.11
FMR1-211ENST00000478848 RAPGEF3O95398 923 aa15.67■□□□□ 0.1
FMR1-211ENST00000478848 ARAP3Q8WWN8 1544 aa15.67■□□□□ 0.1
FMR1-211ENST00000478848 BIVM-ERCC5R4GMW8 1640 aa15.66■□□□□ 0.1
FMR1-211ENST00000478848 DMRT2Q9Y5R5 561 aa15.66■□□□□ 0.1
FMR1-211ENST00000478848 CFAP43Q8NDM7 1665 aa15.65■□□□□ 0.1
FMR1-211ENST00000478848 YEATS2Q9ULM3 1422 aa15.62■□□□□ 0.09
FMR1-211ENST00000478848 IGF1RP08069 1367 aa15.58■□□□□ 0.08
FMR1-211ENST00000478848 DISP1Q96F81 1524 aa15.57■□□□□ 0.08
FMR1-211ENST00000478848 STRCQ7RTU9 1775 aa15.54■□□□□ 0.08
FMR1-211ENST00000478848 UBAP1LF5GYI3 381 aa15.54■□□□□ 0.08
FMR1-211ENST00000478848 MLECQ14165 292 aa15.53■□□□□ 0.08
FMR1-211ENST00000478848 IQGAP2Q13576 1575 aa15.53■□□□□ 0.08
FMR1-211ENST00000478848 MED1Q15648 1581 aaPredicted RBP15.52■□□□□ 0.07
FMR1-211ENST00000478848 LTBP4Q8N2S1 1624 aa15.51■□□□□ 0.07
FMR1-211ENST00000478848 PHLDB1Q86UU1 1377 aa15.5■□□□□ 0.07
FMR1-211ENST00000478848 IQSEC2Q5JU85 1478 aa15.5■□□□□ 0.07
FMR1-211ENST00000478848 POGZQ7Z3K3 1410 aa15.49■□□□□ 0.07
FMR1-211ENST00000478848 PTPRTO14522 1441 aa15.47■□□□□ 0.07
FMR1-211ENST00000478848 CEBPAP49715 358 aaPredicted RBP15.47■□□□□ 0.07
FMR1-211ENST00000478848 FRMPD1Q5SYB0 1578 aa15.46■□□□□ 0.07
FMR1-211ENST00000478848 PREX1Q8TCU6 1659 aa15.46■□□□□ 0.07
FMR1-211ENST00000478848 ARHGEF40Q8TER5 1519 aa15.44■□□□□ 0.06
FMR1-211ENST00000478848 HSPA1LP34931 641 aa15.44■□□□□ 0.06
FMR1-211ENST00000478848 CARMIL1Q5VZK9 1371 aa15.44■□□□□ 0.06
FMR1-211ENST00000478848 FANCAO15360 1455 aa15.44■□□□□ 0.06
FMR1-211ENST00000478848 ARID3CA6NKF2 412 aa15.43■□□□□ 0.06
FMR1-211ENST00000478848 SCAF1Q9H7N4 1312 aaKnown RBP15.42■□□□□ 0.06
FMR1-211ENST00000478848 TTC37Q6PGP7 1564 aa15.41■□□□□ 0.06
FMR1-211ENST00000478848 FER1L4A9Z1Z3 1794 aa15.41■□□□□ 0.06
FMR1-211ENST00000478848 KIF27Q86VH2 1401 aa15.41■□□□□ 0.06
FMR1-211ENST00000478848 NEO1Q92859 1461 aa15.4■□□□□ 0.06
FMR1-211ENST00000478848 KIAA0556O60303 1618 aa15.4■□□□□ 0.06
FMR1-211ENST00000478848 UHRF1BP1Q6BDS2 1440 aa15.4■□□□□ 0.06
FMR1-211ENST00000478848 AKNAQ7Z591 1439 aa15.39■□□□□ 0.05
FMR1-211ENST00000478848 UGGT2Q9NYU1 1516 aa15.38■□□□□ 0.05
FMR1-211ENST00000478848 SIGLEC1Q9BZZ2 1709 aa15.37■□□□□ 0.05
FMR1-211ENST00000478848 PIP4K2BP78356 416 aa15.36■□□□□ 0.05
FMR1-211ENST00000478848 ZNF335Q9H4Z2 1342 aaPredicted RBP15.35■□□□□ 0.05
FMR1-211ENST00000478848 ABCA9Q8IUA7 1624 aa15.34■□□□□ 0.05
FMR1-211ENST00000478848 ABCA8O94911 1581 aa15.33■□□□□ 0.05
FMR1-211ENST00000478848 DENND4BO75064 1496 aaPredicted RBP15.33■□□□□ 0.04
FMR1-211ENST00000478848 SETD1BQ9UPS6 1966 aaKnown RBP15.31■□□□□ 0.04
FMR1-211ENST00000478848 ZFYVE16Q7Z3T8 1539 aa15.29■□□□□ 0.04
FMR1-211ENST00000478848 ARHGEF12Q9NZN5 1544 aa15.28■□□□□ 0.04
FMR1-211ENST00000478848 FHOD3Q2V2M9 1422 aa15.28■□□□□ 0.04
FMR1-211ENST00000478848 RICTORQ6R327 1708 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms