RNA–Protein interactions for RNA: ENST00000478503.6

SH3D19-207, Transcript of SH3 domain containing 19, humanhuman

TSL 2

Gene SH3D19, Length 4,038 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-207ENST00000478503 ZNF316A6NFI3 1004 aaPredicted RBP8.89□□□□□ -0.99
SH3D19-207ENST00000478503 KIF27Q86VH2 1401 aa8.89□□□□□ -0.99
SH3D19-207ENST00000478503 TOP2BQ02880 1626 aa8.88□□□□□ -0.99
SH3D19-207ENST00000478503 CUX2O14529 1486 aa8.88□□□□□ -0.99
SH3D19-207ENST00000478503 PHF23Q9BUL5 403 aaPredicted RBP8.87□□□□□ -0.99
SH3D19-207ENST00000478503 ARAP1Q96P48 1450 aa8.86□□□□□ -0.99
SH3D19-207ENST00000478503 CFTRP13569 1480 aa8.86□□□□□ -0.99
SH3D19-207ENST00000478503 MIER1Q8N108 512 aa8.85□□□□□ -0.99
SH3D19-207ENST00000478503 FAM50AQ14320 339 aaKnown RBP8.85□□□□□ -0.99
SH3D19-207ENST00000478503 CADPSQ9ULU8 1353 aa8.85□□□□□ -0.99
SH3D19-207ENST00000478503 PRXQ9BXM0 1461 aa8.85□□□□□ -0.99
SH3D19-207ENST00000478503 PDIA4P13667 645 aaKnown RBP8.84□□□□□ -0.99
SH3D19-207ENST00000478503 PLCB2Q00722 1185 aa8.84□□□□□ -0.99
SH3D19-207ENST00000478503 IGF1RP08069 1367 aa8.84□□□□□ -0.99
SH3D19-207ENST00000478503 POLR3GLQ9BT43 218 aa8.83□□□□□ -1
SH3D19-207ENST00000478503 NESP48681 1621 aa8.83□□□□□ -1
SH3D19-207ENST00000478503 ACIN1Q9UKV3 1341 aaKnown RBP8.83□□□□□ -1
SH3D19-207ENST00000478503 ARID3CA6NKF2 412 aa8.83□□□□□ -1
SH3D19-207ENST00000478503 CARMIL1Q5VZK9 1371 aa8.82□□□□□ -1
SH3D19-207ENST00000478503 HMGXB3Q12766 1538 aa8.82□□□□□ -1
SH3D19-207ENST00000478503 RAD54L2Q9Y4B4 1467 aa8.81□□□□□ -1
SH3D19-207ENST00000478503 FGD5Q6ZNL6 1462 aa8.8□□□□□ -1
SH3D19-207ENST00000478503 ARHGAP35Q9NRY4 1499 aa8.79□□□□□ -1
SH3D19-207ENST00000478503 CC2D2AQ9P2K1 1620 aa8.78□□□□□ -1
SH3D19-207ENST00000478503 CENPBP07199 599 aaPredicted RBP8.78□□□□□ -1
SH3D19-207ENST00000478503 BIVM-ERCC5R4GMW8 1640 aa8.78□□□□□ -1
SH3D19-207ENST00000478503 TDRD9Q8NDG6 1382 aaKnown RBP8.78□□□□□ -1
SH3D19-207ENST00000478503 FANCD2Q9BXW9 1451 aa8.77□□□□□ -1.01
SH3D19-207ENST00000478503 HIRIP3Q9BW71 556 aaPredicted RBP8.77□□□□□ -1.01
SH3D19-207ENST00000478503 PDE4CQ08493 712 aa8.76□□□□□ -1.01
SH3D19-207ENST00000478503 DHX37Q8IY37 1157 aaKnown RBP8.76□□□□□ -1.01
SH3D19-207ENST00000478503 DHX57Q6P158 1386 aaKnown RBP8.75□□□□□ -1.01
SH3D19-207ENST00000478503 SIN3AQ96ST3 1273 aa8.75□□□□□ -1.01
SH3D19-207ENST00000478503 CCNB3Q8WWL7 1395 aa8.75□□□□□ -1.01
SH3D19-207ENST00000478503 FHOD3Q2V2M9 1422 aa8.75□□□□□ -1.01
SH3D19-207ENST00000478503 ERICH3Q5RHP9 1530 aa8.74□□□□□ -1.01
SH3D19-207ENST00000478503 CDK11BP21127 795 aaKnown RBP8.74□□□□□ -1.01
SH3D19-207ENST00000478503 CDK11AQ9UQ88 783 aaPredicted RBP8.74□□□□□ -1.01
SH3D19-207ENST00000478503 CHMP4AQ9BY43 222 aa8.72□□□□□ -1.01
SH3D19-207ENST00000478503 PHLDB1Q86UU1 1377 aa8.71□□□□□ -1.02
SH3D19-207ENST00000478503 TMEM132AQ24JP5 1023 aa8.71□□□□□ -1.02
SH3D19-207ENST00000478503 NEFLP07196 543 aa8.7□□□□□ -1.02
SH3D19-207ENST00000478503 RAB3GAP2Q9H2M9 1393 aa8.7□□□□□ -1.02
SH3D19-207ENST00000478503 CFAP44Q96MT7 982 aa8.69□□□□□ -1.02
SH3D19-207ENST00000478503 POLA1P09884 1462 aaPredicted RBP8.69□□□□□ -1.02
SH3D19-207ENST00000478503 CHIC2Q9UKJ5 165 aa8.68□□□□□ -1.02
SH3D19-207ENST00000478503 KCNH8Q96L42 1107 aa8.68□□□□□ -1.02
SH3D19-207ENST00000478503 ARID3AQ99856 593 aa8.67□□□□□ -1.02
SH3D19-207ENST00000478503 TOPBP1Q92547 1522 aa8.67□□□□□ -1.02
SH3D19-207ENST00000478503 RRBP1Q9P2E9 1410 aaKnown RBP8.66□□□□□ -1.02
SH3D19-207ENST00000478503 DDX10Q13206 875 aaKnown RBP8.64□□□□□ -1.03
SH3D19-207ENST00000478503 UBE2Q2Q8WVN8 375 aa8.64□□□□□ -1.03
SH3D19-207ENST00000478503 FBLN2P98095 1184 aa8.64□□□□□ -1.03
SH3D19-207ENST00000478503 RRP7BPQ9NSQ0 103 aa8.64□□□□□ -1.03
SH3D19-207ENST00000478503 LRRC9Q6ZRR7 1453 aa8.63□□□□□ -1.03
SH3D19-207ENST00000478503 MTUS2Q5JR59 1369 aa8.63□□□□□ -1.03
SH3D19-207ENST00000478503 URB2Q14146 1524 aaKnown RBP8.63□□□□□ -1.03
SH3D19-207ENST00000478503 FBXO3Q9UK99 471 aa8.63□□□□□ -1.03
SH3D19-207ENST00000478503 A0A0U1RQG5 324 aaPredicted RBP8.62□□□□□ -1.03
SH3D19-207ENST00000478503 PKNOX2Q96KN3 472 aa8.62□□□□□ -1.03
SH3D19-207ENST00000478503 SETD5Q9C0A6 1442 aa8.61□□□□□ -1.03
SH3D19-207ENST00000478503 FKBP8Q14318 412 aa8.61□□□□□ -1.03
SH3D19-207ENST00000478503 AQRO60306 1485 aaKnown RBP eCLIP8.61□□□□□ -1.032e-8■■■■□ 26.3
SH3D19-207ENST00000478503 FHAD1B1AJZ9 1412 aa8.6□□□□□ -1.03
SH3D19-207ENST00000478503 TIAM1Q13009 1591 aa8.6□□□□□ -1.03
SH3D19-207ENST00000478503 TRIM52Q96A61 297 aa8.6□□□□□ -1.03
SH3D19-207ENST00000478503 PCF11O94913 1555 aaKnown RBP8.6□□□□□ -1.03
SH3D19-207ENST00000478503 DNMBPQ6XZF7 1577 aa8.59□□□□□ -1.03
SH3D19-207ENST00000478503 ABCA10Q8WWZ4 1543 aa8.59□□□□□ -1.03
SH3D19-207ENST00000478503 FOXD1Q16676 465 aa8.58□□□□□ -1.04
SH3D19-207ENST00000478503 CLSPNQ9HAW4 1339 aa8.58□□□□□ -1.04
SH3D19-207ENST00000478503 GAPVD1Q14C86 1478 aa8.58□□□□□ -1.04
SH3D19-207ENST00000478503 CCDC136Q96JN2 1154 aa8.58□□□□□ -1.04
SH3D19-207ENST00000478503 CNGB1Q14028 1251 aaPredicted RBP8.57□□□□□ -1.04
SH3D19-207ENST00000478503 PDS5BQ9NTI5 1447 aa8.57□□□□□ -1.04
SH3D19-207ENST00000478503 MAPKBP1O60336 1514 aa8.54□□□□□ -1.04
SH3D19-207ENST00000478503 PTPRKQ15262 1439 aa8.54□□□□□ -1.04
SH3D19-207ENST00000478503 ZNF777Q9ULD5 760 aaPredicted RBP8.54□□□□□ -1.04
SH3D19-207ENST00000478503 CASKIN1Q8WXD9 1431 aa8.54□□□□□ -1.04
SH3D19-207ENST00000478503 BCL11BQ9C0K0 894 aaPredicted RBP8.53□□□□□ -1.04
SH3D19-207ENST00000478503 PRDM2Q13029 1718 aa8.53□□□□□ -1.04
SH3D19-207ENST00000478503 ZNF644Q9H582 1327 aaPredicted RBP8.53□□□□□ -1.04
SH3D19-207ENST00000478503 FMN1Q68DA7 1419 aa8.53□□□□□ -1.04
SH3D19-207ENST00000478503 FGD6Q6ZV73 1430 aa8.52□□□□□ -1.05
SH3D19-207ENST00000478503 WDR97A6NE52 1622 aa8.52□□□□□ -1.05
SH3D19-207ENST00000478503 TONSLQ96HA7 1378 aa8.52□□□□□ -1.05
SH3D19-207ENST00000478503 PPP1R15AO75807 674 aaPredicted RBP8.51□□□□□ -1.05
SH3D19-207ENST00000478503 BRD2P25440 801 aaKnown RBP8.51□□□□□ -1.05
SH3D19-207ENST00000478503 ZNF608Q9ULD9 1512 aaPredicted RBP8.5□□□□□ -1.05
SH3D19-207ENST00000478503 FYCO1Q9BQS8 1478 aa8.5□□□□□ -1.05
SH3D19-207ENST00000478503 IRX6P78412 446 aaPredicted RBP8.5□□□□□ -1.05
SH3D19-207ENST00000478503 NCOA2Q15596 1464 aa8.49□□□□□ -1.05
SH3D19-207ENST00000478503 TAF7LQ5H9L4 462 aa8.49□□□□□ -1.05
SH3D19-207ENST00000478503 CHMP7Q8WUX9 453 aaPredicted RBP8.49□□□□□ -1.05
SH3D19-207ENST00000478503 LAMC3Q9Y6N6 1575 aa8.48□□□□□ -1.05
SH3D19-207ENST00000478503 KIF21AQ7Z4S6 1674 aa8.48□□□□□ -1.05
SH3D19-207ENST00000478503 ZNF326Q5BKZ1 582 aaKnown RBP8.48□□□□□ -1.05
SH3D19-207ENST00000478503 SNAPC4Q5SXM2 1469 aa8.48□□□□□ -1.05
SH3D19-207ENST00000478503 SENP3-EIF4A1A0A087X0R7 540 aa8.47□□□□□ -1.05
SH3D19-207ENST00000478503 CDK13Q14004 1512 aaKnown RBP8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms