RNA–Protein interactions for RNA: ENST00000477446.5

EPHB4-204, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 1,551 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-204ENST00000477446 KIAA0586Q9BVV6 1533 aa27.54■■■□□ 2
EPHB4-204ENST00000477446 GOLGA3Q08378 1498 aa27.52■■■□□ 2
EPHB4-204ENST00000477446 CTTNBP2Q8WZ74 1663 aa27.51■■□□□ 1.99
EPHB4-204ENST00000477446 IQGAP2Q13576 1575 aa27.46■■□□□ 1.99
EPHB4-204ENST00000477446 SHROOM2Q13796 1616 aa27.44■■□□□ 1.98
EPHB4-204ENST00000477446 UBTFP17480 764 aaKnown RBP27.43■■□□□ 1.98
EPHB4-204ENST00000477446 JPH4Q96JJ6 628 aa27.43■■□□□ 1.98
EPHB4-204ENST00000477446 LOC105371045A0A1W2PR82 267 aa27.35■■□□□ 1.97
EPHB4-204ENST00000477446 PRG4Q92954 1404 aaPredicted RBP27.34■■□□□ 1.97
EPHB4-204ENST00000477446 ARHGEF11O15085 1522 aa27.32■■□□□ 1.96
EPHB4-204ENST00000477446 UGGT2Q9NYU1 1516 aa27.32■■□□□ 1.96
EPHB4-204ENST00000477446 ERCC6L2Q5T890 1561 aa27.31■■□□□ 1.96
EPHB4-204ENST00000477446 RIMBP3CA6NJZ7 1639 aa27.29■■□□□ 1.96
EPHB4-204ENST00000477446 RIMBP3BA6NNM3 1639 aa27.29■■□□□ 1.96
EPHB4-204ENST00000477446 RIMBP3Q9UFD9 1639 aa27.29■■□□□ 1.96
EPHB4-204ENST00000477446 TNIKQ9UKE5 1360 aa27.26■■□□□ 1.96
EPHB4-204ENST00000477446 RANGAP1P46060 587 aaPredicted RBP27.25■■□□□ 1.95
EPHB4-204ENST00000477446 DISP1Q96F81 1524 aa27.24■■□□□ 1.95
EPHB4-204ENST00000477446 CARMIL2Q6F5E8 1435 aa27.22■■□□□ 1.95
EPHB4-204ENST00000477446 KIAA0556O60303 1618 aa27.19■■□□□ 1.94
EPHB4-204ENST00000477446 SAMD9Q5K651 1589 aa27.16■■□□□ 1.94
EPHB4-204ENST00000477446 ARAP1Q96P48 1450 aa27.14■■□□□ 1.94
EPHB4-204ENST00000477446 P3H3Q8IVL6 736 aa27.12■■□□□ 1.93
EPHB4-204ENST00000477446 EFCAB5A4FU69 1503 aa27.11■■□□□ 1.93
EPHB4-204ENST00000477446 ARHGAP35Q9NRY4 1499 aa27.07■■□□□ 1.92
EPHB4-204ENST00000477446 CYB5RLQ6IPT4 315 aa27.07■■□□□ 1.92
EPHB4-204ENST00000477446 TTBK1Q5TCY1 1321 aaPredicted RBP27.06■■□□□ 1.92
EPHB4-204ENST00000477446 PTPRGP23470 1445 aa27.06■■□□□ 1.92
EPHB4-204ENST00000477446 CLIP1P30622 1438 aa27.05■■□□□ 1.92
EPHB4-204ENST00000477446 CEP162Q5TB80 1403 aa27.05■■□□□ 1.92
EPHB4-204ENST00000477446 FHOD3Q2V2M9 1422 aa27.03■■□□□ 1.92
EPHB4-204ENST00000477446 PLB1Q6P1J6 1458 aa26.89■■□□□ 1.9
EPHB4-204ENST00000477446 UACAQ9BZF9 1416 aa26.89■■□□□ 1.89
EPHB4-204ENST00000477446 ABCA8O94911 1581 aa26.87■■□□□ 1.89
EPHB4-204ENST00000477446 ADCY10Q96PN6 1610 aa26.87■■□□□ 1.89
EPHB4-204ENST00000477446 FMN1Q68DA7 1419 aa26.86■■□□□ 1.89
EPHB4-204ENST00000477446 UHRF1BP1LA0JNW5 1464 aa26.84■■□□□ 1.89
EPHB4-204ENST00000477446 ABCC2Q92887 1545 aa26.83■■□□□ 1.89
EPHB4-204ENST00000477446 RAPGEF6Q8TEU7 1601 aa26.82■■□□□ 1.88
EPHB4-204ENST00000477446 PCF11O94913 1555 aaKnown RBP26.72■■□□□ 1.87
EPHB4-204ENST00000477446 NUP153P49790 1475 aaKnown RBP26.72■■□□□ 1.87
EPHB4-204ENST00000477446 KDM5BQ9UGL1 1544 aa26.71■■□□□ 1.87
EPHB4-204ENST00000477446 NPM1P06748 294 aaKnown RBP eCLIP26.71■■□□□ 1.87
EPHB4-204ENST00000477446 CASKIN1Q8WXD9 1431 aa26.71■■□□□ 1.87
EPHB4-204ENST00000477446 ATP1B4Q9UN42 357 aaPredicted RBP26.7■■□□□ 1.86
EPHB4-204ENST00000477446 ARID3CA6NKF2 412 aa26.69■■□□□ 1.86
EPHB4-204ENST00000477446 HECW1Q76N89 1606 aa26.69■■□□□ 1.86
EPHB4-204ENST00000477446 ZCCHC11Q5TAX3 1644 aaKnown RBP26.68■■□□□ 1.86
EPHB4-204ENST00000477446 VPS8Q8N3P4 1428 aa26.68■■□□□ 1.86
EPHB4-204ENST00000477446 FYCO1Q9BQS8 1478 aa26.66■■□□□ 1.86
EPHB4-204ENST00000477446 ATP10BO94823 1461 aa26.65■■□□□ 1.86
EPHB4-204ENST00000477446 LRRIQ1Q96JM4 1722 aa26.64■■□□□ 1.85
EPHB4-204ENST00000477446 EPRSP07814 1512 aaKnown RBP26.61■■□□□ 1.85
EPHB4-204ENST00000477446 CDK13Q14004 1512 aaKnown RBP26.59■■□□□ 1.85
EPHB4-204ENST00000477446 MAPKBP1O60336 1514 aa26.59■■□□□ 1.85
EPHB4-204ENST00000477446 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.58■■□□□ 1.85
EPHB4-204ENST00000477446 HNRNPUL2Q1KMD3 747 aaKnown RBP26.58■■□□□ 1.85
EPHB4-204ENST00000477446 ASXL2Q76L83 1435 aa26.55■■□□□ 1.84
EPHB4-204ENST00000477446 CCDC18Q5T9S5 1454 aa26.54■■□□□ 1.84
EPHB4-204ENST00000477446 WDR7Q9Y4E6 1490 aa26.48■■□□□ 1.83
EPHB4-204ENST00000477446 PLEKHD1A6NEE1 506 aa26.46■■□□□ 1.83
EPHB4-204ENST00000477446 CDK11AQ9UQ88 783 aaPredicted RBP26.44■■□□□ 1.82
EPHB4-204ENST00000477446 CFAP43Q8NDM7 1665 aa26.42■■□□□ 1.82
EPHB4-204ENST00000477446 TIAM1Q13009 1591 aa26.41■■□□□ 1.82
EPHB4-204ENST00000477446 ABCC10Q5T3U5 1492 aa26.41■■□□□ 1.82
EPHB4-204ENST00000477446 KCNH8Q96L42 1107 aa26.41■■□□□ 1.82
EPHB4-204ENST00000477446 MAGI3Q5TCQ9 1506 aa26.4■■□□□ 1.82
EPHB4-204ENST00000477446 DIP2BQ9P265 1576 aa26.39■■□□□ 1.82
EPHB4-204ENST00000477446 MAP3K1Q13233 1512 aa26.38■■□□□ 1.81
EPHB4-204ENST00000477446 KIF13AQ9H1H9 1805 aa26.37■■□□□ 1.81
EPHB4-204ENST00000477446 APLP2Q06481 763 aa26.37■■□□□ 1.81
EPHB4-204ENST00000477446 TROQ12816 1431 aaPredicted RBP26.36■■□□□ 1.81
EPHB4-204ENST00000477446 TRHP20396 242 aaPredicted RBP26.36■■□□□ 1.81
EPHB4-204ENST00000477446 FAM69CQ0P6D2 419 aa26.35■■□□□ 1.81
EPHB4-204ENST00000477446 MTUS2Q5JR59 1369 aa26.33■■□□□ 1.8
EPHB4-204ENST00000477446 GLI2P10070 1586 aa26.32■■□□□ 1.8
EPHB4-204ENST00000477446 KIF14Q15058 1648 aa26.3■■□□□ 1.8
EPHB4-204ENST00000477446 KANK4Q5T7N3 995 aaPredicted RBP26.29■■□□□ 1.8
EPHB4-204ENST00000477446 LRRC9Q6ZRR7 1453 aa26.29■■□□□ 1.8
EPHB4-204ENST00000477446 EHBP1L1Q8N3D4 1523 aa26.29■■□□□ 1.8
EPHB4-204ENST00000477446 ABCA9Q8IUA7 1624 aa26.26■■□□□ 1.79
EPHB4-204ENST00000477446 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.26■■□□□ 1.79
EPHB4-204ENST00000477446 MAP3K4Q9Y6R4 1608 aa26.24■■□□□ 1.79
EPHB4-204ENST00000477446 TTC37Q6PGP7 1564 aa26.23■■□□□ 1.79
EPHB4-204ENST00000477446 TSPOAP1O95153 1857 aa26.19■■□□□ 1.78
EPHB4-204ENST00000477446 CD109Q6YHK3 1445 aa26.19■■□□□ 1.78
EPHB4-204ENST00000477446 SUPT6HQ7KZ85 1726 aaKnown RBP26.19■■□□□ 1.78
EPHB4-204ENST00000477446 NCOA2Q15596 1464 aa26.14■■□□□ 1.78
EPHB4-204ENST00000477446 PPRC1Q5VV67 1664 aaKnown RBP26.14■■□□□ 1.78
EPHB4-204ENST00000477446 MYO5CQ9NQX4 1742 aa26.13■■□□□ 1.77
EPHB4-204ENST00000477446 PPARGC1BQ86YN6 1023 aaKnown RBP26.12■■□□□ 1.77
EPHB4-204ENST00000477446 CDC42BPAQ5VT25 1732 aa26.11■■□□□ 1.77
EPHB4-204ENST00000477446 PLCH2O75038 1416 aa26.1■■□□□ 1.77
EPHB4-204ENST00000477446 CCNB3Q8WWL7 1395 aa26.09■■□□□ 1.77
EPHB4-204ENST00000477446 GPATCH8Q9UKJ3 1502 aaKnown RBP26.08■■□□□ 1.77
EPHB4-204ENST00000477446 CDC42BPBQ9Y5S2 1711 aa26.07■■□□□ 1.76
EPHB4-204ENST00000477446 PREX2Q70Z35 1606 aa26.07■■□□□ 1.76
EPHB4-204ENST00000477446 TEX14Q8IWB6 1497 aa26.05■■□□□ 1.76
EPHB4-204ENST00000477446 ARAP3Q8WWN8 1544 aa26.04■■□□□ 1.76
EPHB4-204ENST00000477446 ITSN2Q9NZM3 1697 aa26.03■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms