RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 KDM6BO15054 1643 aa17.9■□□□□ 0.46
COL4A5-204ENST00000477429 DISP3Q9P2K9 1392 aa17.89■□□□□ 0.45
COL4A5-204ENST00000477429 SHROOM2Q13796 1616 aa17.88■□□□□ 0.45
COL4A5-204ENST00000477429 WRNQ14191 1432 aaPredicted RBP eCLIP17.86■□□□□ 0.45
COL4A5-204ENST00000477429 SUPT5HO00267 1087 aaKnown RBP17.84■□□□□ 0.45
COL4A5-204ENST00000477429 FHAD1B1AJZ9 1412 aa17.83■□□□□ 0.45
COL4A5-204ENST00000477429 TOP2BQ02880 1626 aa17.81■□□□□ 0.44
COL4A5-204ENST00000477429 BIVM-ERCC5R4GMW8 1640 aa17.81■□□□□ 0.44
COL4A5-204ENST00000477429 PRG4Q92954 1404 aaPredicted RBP17.8■□□□□ 0.44
COL4A5-204ENST00000477429 FAM69CQ0P6D2 419 aa17.77■□□□□ 0.44
COL4A5-204ENST00000477429 ERICH3Q5RHP9 1530 aa17.75■□□□□ 0.43
COL4A5-204ENST00000477429 JPH4Q96JJ6 628 aa17.74■□□□□ 0.43
COL4A5-204ENST00000477429 ABCC10Q5T3U5 1492 aa17.74■□□□□ 0.43
COL4A5-204ENST00000477429 RUSC2Q8N2Y8 1516 aa17.69■□□□□ 0.42
COL4A5-204ENST00000477429 DIP2BQ9P265 1576 aa17.69■□□□□ 0.42
COL4A5-204ENST00000477429 TSPOAP1O95153 1857 aa17.67■□□□□ 0.42
COL4A5-204ENST00000477429 ADCY10Q96PN6 1610 aa17.65■□□□□ 0.42
COL4A5-204ENST00000477429 PHF23Q9BUL5 403 aaPredicted RBP17.65■□□□□ 0.42
COL4A5-204ENST00000477429 MAPKBP1O60336 1514 aa17.61■□□□□ 0.41
COL4A5-204ENST00000477429 SPATA31D1Q6ZQQ2 1576 aa17.6■□□□□ 0.41
COL4A5-204ENST00000477429 IGF1RP08069 1367 aa17.55■□□□□ 0.4
COL4A5-204ENST00000477429 NPM1P06748 294 aaKnown RBP eCLIP17.54■□□□□ 0.4
COL4A5-204ENST00000477429 KIAA0586Q9BVV6 1533 aa17.53■□□□□ 0.4
COL4A5-204ENST00000477429 TTBK1Q5TCY1 1321 aaPredicted RBP17.48■□□□□ 0.39
COL4A5-204ENST00000477429 PTPRGP23470 1445 aa17.44■□□□□ 0.38
COL4A5-204ENST00000477429 COL17A1Q9UMD9 1497 aaPredicted RBP17.43■□□□□ 0.38
COL4A5-204ENST00000477429 PPRC1Q5VV67 1664 aaKnown RBP17.42■□□□□ 0.38
COL4A5-204ENST00000477429 KIF27Q86VH2 1401 aa17.41■□□□□ 0.38
COL4A5-204ENST00000477429 CUL7Q14999 1698 aa17.4■□□□□ 0.38
COL4A5-204ENST00000477429 ASXL2Q76L83 1435 aa17.39■□□□□ 0.38
COL4A5-204ENST00000477429 ABCC2Q92887 1545 aa17.39■□□□□ 0.37
COL4A5-204ENST00000477429 CARMIL1Q5VZK9 1371 aa17.38■□□□□ 0.37
COL4A5-204ENST00000477429 CERKQ8TCT0 537 aa17.37■□□□□ 0.37
COL4A5-204ENST00000477429 TNIKQ9UKE5 1360 aa17.37■□□□□ 0.37
COL4A5-204ENST00000477429 DISP1Q96F81 1524 aa17.34■□□□□ 0.37
COL4A5-204ENST00000477429 GLI2P10070 1586 aa17.33■□□□□ 0.37
COL4A5-204ENST00000477429 UHRF1BP1LA0JNW5 1464 aa17.31■□□□□ 0.36
COL4A5-204ENST00000477429 PLB1Q6P1J6 1458 aa17.31■□□□□ 0.36
COL4A5-204ENST00000477429 IQGAP2Q13576 1575 aa17.3■□□□□ 0.36
COL4A5-204ENST00000477429 UACAQ9BZF9 1416 aa17.3■□□□□ 0.36
COL4A5-204ENST00000477429 CARMIL2Q6F5E8 1435 aa17.29■□□□□ 0.36
COL4A5-204ENST00000477429 EPRSP07814 1512 aaKnown RBP17.28■□□□□ 0.36
COL4A5-204ENST00000477429 KDM5BQ9UGL1 1544 aa17.26■□□□□ 0.35
COL4A5-204ENST00000477429 MAP3K4Q9Y6R4 1608 aa17.25■□□□□ 0.35
COL4A5-204ENST00000477429 ZCCHC11Q5TAX3 1644 aaKnown RBP17.22■□□□□ 0.35
COL4A5-204ENST00000477429 PCF11O94913 1555 aaKnown RBP17.21■□□□□ 0.35
COL4A5-204ENST00000477429 UGGT2Q9NYU1 1516 aa17.21■□□□□ 0.34
COL4A5-204ENST00000477429 KIAA0556O60303 1618 aa17.18■□□□□ 0.34
COL4A5-204ENST00000477429 RAPGEF2Q9Y4G8 1499 aa17.16■□□□□ 0.34
COL4A5-204ENST00000477429 PTPRMP28827 1452 aa17.15■□□□□ 0.34
COL4A5-204ENST00000477429 WDR7Q9Y4E6 1490 aa17.13■□□□□ 0.33
COL4A5-204ENST00000477429 TEX14Q8IWB6 1497 aa17.12■□□□□ 0.33
COL4A5-204ENST00000477429 KIF21BO75037 1637 aa17.12■□□□□ 0.33
COL4A5-204ENST00000477429 HSPA2P54652 639 aa17.09■□□□□ 0.33
COL4A5-204ENST00000477429 KCNH8Q96L42 1107 aa17.08■□□□□ 0.32
COL4A5-204ENST00000477429 ABCA8O94911 1581 aa17.07■□□□□ 0.32
COL4A5-204ENST00000477429 CD109Q6YHK3 1445 aa17.07■□□□□ 0.32
COL4A5-204ENST00000477429 MAGI3Q5TCQ9 1506 aa17.06■□□□□ 0.32
COL4A5-204ENST00000477429 ADAMTSL3P82987 1691 aa17.05■□□□□ 0.32
COL4A5-204ENST00000477429 ARID3CA6NKF2 412 aa17.03■□□□□ 0.32
COL4A5-204ENST00000477429 CFAP43Q8NDM7 1665 aa17■□□□□ 0.31
COL4A5-204ENST00000477429 CTTNBP2Q8WZ74 1663 aa17■□□□□ 0.31
COL4A5-204ENST00000477429 P3H3Q8IVL6 736 aa16.96■□□□□ 0.31
COL4A5-204ENST00000477429 PRXQ9BXM0 1461 aa16.96■□□□□ 0.31
COL4A5-204ENST00000477429 ATP10BO94823 1461 aa16.95■□□□□ 0.3
COL4A5-204ENST00000477429 GOLGA3Q08378 1498 aa16.94■□□□□ 0.3
COL4A5-204ENST00000477429 ARAP3Q8WWN8 1544 aa16.94■□□□□ 0.3
COL4A5-204ENST00000477429 RAPGEF3O95398 923 aa16.92■□□□□ 0.3
COL4A5-204ENST00000477429 MADDQ8WXG6 1647 aa16.91■□□□□ 0.3
COL4A5-204ENST00000477429 FRMPD1Q5SYB0 1578 aa16.87■□□□□ 0.29
COL4A5-204ENST00000477429 ABCA9Q8IUA7 1624 aa16.86■□□□□ 0.29
COL4A5-204ENST00000477429 BCORL1Q5H9F3 1711 aa16.83■□□□□ 0.28
COL4A5-204ENST00000477429 MED1Q15648 1581 aaPredicted RBP16.81■□□□□ 0.28
COL4A5-204ENST00000477429 SAMD9Q5K651 1589 aa16.81■□□□□ 0.28
COL4A5-204ENST00000477429 RIMS1Q86UR5 1692 aaKnown RBP16.79■□□□□ 0.28
COL4A5-204ENST00000477429 NUP153P49790 1475 aaKnown RBP16.79■□□□□ 0.28
COL4A5-204ENST00000477429 NEO1Q92859 1461 aa16.78■□□□□ 0.28
COL4A5-204ENST00000477429 RAPGEF6Q8TEU7 1601 aa16.78■□□□□ 0.28
COL4A5-204ENST00000477429 SIGLEC1Q9BZZ2 1709 aa16.76■□□□□ 0.27
COL4A5-204ENST00000477429 PHLDB1Q86UU1 1377 aa16.76■□□□□ 0.27
COL4A5-204ENST00000477429 RANGAP1P46060 587 aaPredicted RBP16.75■□□□□ 0.27
COL4A5-204ENST00000477429 STRCQ7RTU9 1775 aa16.74■□□□□ 0.27
COL4A5-204ENST00000477429 ARID4BQ4LE39 1312 aaPredicted RBP16.74■□□□□ 0.27
COL4A5-204ENST00000477429 FHOD3Q2V2M9 1422 aa16.73■□□□□ 0.27
COL4A5-204ENST00000477429 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.73■□□□□ 0.27
COL4A5-204ENST00000477429 HNRNPUL2Q1KMD3 747 aaKnown RBP16.73■□□□□ 0.27
COL4A5-204ENST00000477429 PLPPR3Q6T4P5 718 aa16.73■□□□□ 0.27
COL4A5-204ENST00000477429 LTBP4Q8N2S1 1624 aa16.71■□□□□ 0.27
COL4A5-204ENST00000477429 CSRNP3Q8WYN3 585 aa16.71■□□□□ 0.27
COL4A5-204ENST00000477429 YEATS2Q9ULM3 1422 aa16.7■□□□□ 0.26
COL4A5-204ENST00000477429 ARHGEF40Q8TER5 1519 aa16.7■□□□□ 0.26
COL4A5-204ENST00000477429 RICTORQ6R327 1708 aa16.7■□□□□ 0.26
COL4A5-204ENST00000477429 AKNAQ7Z591 1439 aa16.69■□□□□ 0.26
COL4A5-204ENST00000477429 DENND4BO75064 1496 aaPredicted RBP16.68■□□□□ 0.26
COL4A5-204ENST00000477429 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.68■□□□□ 0.26
COL4A5-204ENST00000477429 TTC37Q6PGP7 1564 aa16.67■□□□□ 0.26
COL4A5-204ENST00000477429 FANCAO15360 1455 aa16.65■□□□□ 0.26
COL4A5-204ENST00000477429 IQSEC2Q5JU85 1478 aa16.64■□□□□ 0.25
COL4A5-204ENST00000477429 ZMYM4Q5VZL5 1548 aa16.62■□□□□ 0.25
COL4A5-204ENST00000477429 PLEKHD1A6NEE1 506 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms