RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 NISCHQ9Y2I1 1504 aa25.14■■□□□ 1.62
COL4A5-204ENST00000477429 DNAJC5BQ9UF47 199 aa23.33■■□□□ 1.33
COL4A5-204ENST00000477429 ABCC9O60706 1549 aa23.27■■□□□ 1.32
COL4A5-204ENST00000477429 CCDC180Q9P1Z9 1646 aa22.58■■□□□ 1.21
COL4A5-204ENST00000477429 DNAJC5Q9H3Z4 198 aa22.41■■□□□ 1.18
COL4A5-204ENST00000477429 RB1CC1Q8TDY2 1594 aa21.65■■□□□ 1.06
COL4A5-204ENST00000477429 PABPN1Q86U42 306 aaKnown RBP eCLIP21.46■■□□□ 1.03
COL4A5-204ENST00000477429 NACADO15069 1562 aa21.44■■□□□ 1.02
COL4A5-204ENST00000477429 DCAF8L2P0C7V8 631 aa21.36■■□□□ 1.01
COL4A5-204ENST00000477429 UNC13AQ9UPW8 1703 aa21.26■□□□□ 0.99
COL4A5-204ENST00000477429 BICRAQ9NZM4 1560 aa21.2■□□□□ 0.98
COL4A5-204ENST00000477429 CECR2Q9BXF3 1484 aa21.07■□□□□ 0.96
COL4A5-204ENST00000477429 MYO15BQ96JP2 1530 aa21.03■□□□□ 0.96
COL4A5-204ENST00000477429 CC2D2AQ9P2K1 1620 aa20.93■□□□□ 0.94
COL4A5-204ENST00000477429 TRIM41Q8WV44 630 aa20.78■□□□□ 0.92
COL4A5-204ENST00000477429 ZCCHC6Q5VYS8 1495 aaKnown RBP20.77■□□□□ 0.92
COL4A5-204ENST00000477429 SCRIBQ14160 1630 aa20.68■□□□□ 0.9
COL4A5-204ENST00000477429 DCAF1Q9Y4B6 1507 aa20.67■□□□□ 0.9
COL4A5-204ENST00000477429 SHROOM4Q9ULL8 1493 aa20.65■□□□□ 0.9
COL4A5-204ENST00000477429 EIF4G1Q04637 1599 aaKnown RBP20.63■□□□□ 0.89
COL4A5-204ENST00000477429 CUX2O14529 1486 aa20.57■□□□□ 0.88
COL4A5-204ENST00000477429 ERCC6Q03468 1493 aa20.09■□□□□ 0.81
COL4A5-204ENST00000477429 CHIC1Q5VXU3 224 aa19.9■□□□□ 0.78
COL4A5-204ENST00000477429 NCAPD3P42695 1498 aa19.86■□□□□ 0.77
COL4A5-204ENST00000477429 AEBP2Q6ZN18 517 aaPredicted RBP19.84■□□□□ 0.77
COL4A5-204ENST00000477429 ATAD2BQ9ULI0 1458 aa19.79■□□□□ 0.76
COL4A5-204ENST00000477429 NESP48681 1621 aa19.76■□□□□ 0.75
COL4A5-204ENST00000477429 THOC2Q8NI27 1593 aaKnown RBP19.67■□□□□ 0.74
COL4A5-204ENST00000477429 SMARCA4P51532 1647 aa19.66■□□□□ 0.74
COL4A5-204ENST00000477429 HMGXB3Q12766 1538 aa19.64■□□□□ 0.73
COL4A5-204ENST00000477429 SMARCA2P51531 1590 aa19.61■□□□□ 0.73
COL4A5-204ENST00000477429 BAZ1BQ9UIG0 1483 aaKnown RBP19.52■□□□□ 0.72
COL4A5-204ENST00000477429 ILDR1Q86SU0 546 aaPredicted RBP19.49■□□□□ 0.71
COL4A5-204ENST00000477429 BAZ1AQ9NRL2 1556 aaPredicted RBP19.46■□□□□ 0.71
COL4A5-204ENST00000477429 MROH2BQ7Z745 1585 aa19.44■□□□□ 0.7
COL4A5-204ENST00000477429 PEG3Q9GZU2 1588 aa19.44■□□□□ 0.7
COL4A5-204ENST00000477429 RIMBP3CA6NJZ7 1639 aa19.41■□□□□ 0.7
COL4A5-204ENST00000477429 RIMBP3BA6NNM3 1639 aa19.41■□□□□ 0.7
COL4A5-204ENST00000477429 RIMBP3Q9UFD9 1639 aa19.41■□□□□ 0.7
COL4A5-204ENST00000477429 KIF21AQ7Z4S6 1674 aa19.4■□□□□ 0.7
COL4A5-204ENST00000477429 LAMC3Q9Y6N6 1575 aa19.39■□□□□ 0.69
COL4A5-204ENST00000477429 OSCARQ8IYS5 282 aa19.36■□□□□ 0.69
COL4A5-204ENST00000477429 TRHP20396 242 aaPredicted RBP19.32■□□□□ 0.68
COL4A5-204ENST00000477429 PDS5BQ9NTI5 1447 aa19.28■□□□□ 0.68
COL4A5-204ENST00000477429 CADPSQ9ULU8 1353 aa19.24■□□□□ 0.67
COL4A5-204ENST00000477429 MRC2Q9UBG0 1479 aa19.19■□□□□ 0.66
COL4A5-204ENST00000477429 WDR62O43379 1518 aa19.17■□□□□ 0.66
COL4A5-204ENST00000477429 WIZO95785 1651 aa19.17■□□□□ 0.66
COL4A5-204ENST00000477429 ARHGEF11O15085 1522 aa19.15■□□□□ 0.66
COL4A5-204ENST00000477429 CYB5RLQ6IPT4 315 aa19.08■□□□□ 0.64
COL4A5-204ENST00000477429 CEP164Q9UPV0 1460 aa19.03■□□□□ 0.64
COL4A5-204ENST00000477429 FANCD2Q9BXW9 1451 aa19.03■□□□□ 0.64
COL4A5-204ENST00000477429 CFTRP13569 1480 aa18.97■□□□□ 0.63
COL4A5-204ENST00000477429 URB2Q14146 1524 aaKnown RBP18.96■□□□□ 0.63
COL4A5-204ENST00000477429 RSF1Q96T23 1441 aaPredicted RBP18.91■□□□□ 0.62
COL4A5-204ENST00000477429 ARAP1Q96P48 1450 aa18.9■□□□□ 0.62
COL4A5-204ENST00000477429 TOP2AP11388 1531 aaKnown RBP18.84■□□□□ 0.61
COL4A5-204ENST00000477429 ZNF608Q9ULD9 1512 aaPredicted RBP18.8■□□□□ 0.6
COL4A5-204ENST00000477429 CCDC88BA6NC98 1476 aa18.69■□□□□ 0.58
COL4A5-204ENST00000477429 IFT140Q96RY7 1462 aa18.66■□□□□ 0.58
COL4A5-204ENST00000477429 TOPBP1Q92547 1522 aa18.65■□□□□ 0.58
COL4A5-204ENST00000477429 PRDM2Q13029 1718 aa18.63■□□□□ 0.57
COL4A5-204ENST00000477429 EIF4G3O43432 1585 aaKnown RBP18.59■□□□□ 0.57
COL4A5-204ENST00000477429 AQRO60306 1485 aaKnown RBP eCLIP18.58■□□□□ 0.56
COL4A5-204ENST00000477429 TARBP1Q13395 1621 aaKnown RBP18.52■□□□□ 0.55
COL4A5-204ENST00000477429 DNMBPQ6XZF7 1577 aa18.51■□□□□ 0.55
COL4A5-204ENST00000477429 CHD1O14646 1710 aa18.5■□□□□ 0.55
COL4A5-204ENST00000477429 KDM4FA0A1W2PPD8 638 aa18.48■□□□□ 0.55
COL4A5-204ENST00000477429 POLA1P09884 1462 aaPredicted RBP18.46■□□□□ 0.54
COL4A5-204ENST00000477429 RAD54L2Q9Y4B4 1467 aa18.45■□□□□ 0.54
COL4A5-204ENST00000477429 ABCC8Q09428 1581 aa18.44■□□□□ 0.54
COL4A5-204ENST00000477429 FBLN2P98095 1184 aa18.44■□□□□ 0.54
COL4A5-204ENST00000477429 TDRD9Q8NDG6 1382 aaKnown RBP18.41■□□□□ 0.54
COL4A5-204ENST00000477429 SOGA1O94964 1423 aa18.33■□□□□ 0.53
COL4A5-204ENST00000477429 SNAPC4Q5SXM2 1469 aa18.33■□□□□ 0.52
COL4A5-204ENST00000477429 LMTK3Q96Q04 1460 aa18.33■□□□□ 0.52
COL4A5-204ENST00000477429 CLASP1Q7Z460 1538 aa18.31■□□□□ 0.52
COL4A5-204ENST00000477429 FGD5Q6ZNL6 1462 aa18.29■□□□□ 0.52
COL4A5-204ENST00000477429 FBXO41Q8TF61 875 aa18.29■□□□□ 0.52
COL4A5-204ENST00000477429 CUX1P39880 1505 aa18.26■□□□□ 0.51
COL4A5-204ENST00000477429 ERCC6L2Q5T890 1561 aa18.25■□□□□ 0.51
COL4A5-204ENST00000477429 SOCS7O14512 581 aa18.24■□□□□ 0.51
COL4A5-204ENST00000477429 ILDR2Q71H61 639 aa18.22■□□□□ 0.51
COL4A5-204ENST00000477429 CHMP7Q8WUX9 453 aaPredicted RBP18.21■□□□□ 0.51
COL4A5-204ENST00000477429 HECW2Q9P2P5 1572 aa18.2■□□□□ 0.5
COL4A5-204ENST00000477429 MAGI1Q96QZ7 1491 aaPredicted RBP18.19■□□□□ 0.5
COL4A5-204ENST00000477429 GRIN2BQ13224 1484 aa18.18■□□□□ 0.5
COL4A5-204ENST00000477429 SYNJ1O43426 1573 aa18.17■□□□□ 0.5
COL4A5-204ENST00000477429 SYNJ2O15056 1496 aa18.16■□□□□ 0.5
COL4A5-204ENST00000477429 KIF13AQ9H1H9 1805 aa18.15■□□□□ 0.5
COL4A5-204ENST00000477429 WDR97A6NE52 1622 aa18.15■□□□□ 0.5
COL4A5-204ENST00000477429 GAPVD1Q14C86 1478 aa18.11■□□□□ 0.49
COL4A5-204ENST00000477429 PBRM1Q86U86 1689 aa18.08■□□□□ 0.48
COL4A5-204ENST00000477429 ABCA5Q8WWZ7 1642 aa18.05■□□□□ 0.48
COL4A5-204ENST00000477429 ABCA10Q8WWZ4 1543 aa18.03■□□□□ 0.48
COL4A5-204ENST00000477429 CEP170Q5SW79 1584 aa17.98■□□□□ 0.47
COL4A5-204ENST00000477429 GRIN2AQ12879 1464 aa17.97■□□□□ 0.47
COL4A5-204ENST00000477429 NUP160Q12769 1436 aa17.94■□□□□ 0.46
COL4A5-204ENST00000477429 ADGRL1O94910 1474 aa17.93■□□□□ 0.46
COL4A5-204ENST00000477429 ADAMTS12P58397 1594 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms