RNA–Protein interactions for RNA: ENST00000476139.5

TVP23B-202, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 1 (best) BASIC

Gene TVP23B, Length 2,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-202ENST00000476139 CCNB3Q8WWL7 1395 aa24.78■■□□□ 1.56
TVP23B-202ENST00000476139 WDR97A6NE52 1622 aa24.78■■□□□ 1.56
TVP23B-202ENST00000476139 CUL7Q14999 1698 aa24.77■■□□□ 1.56
TVP23B-202ENST00000476139 TIAM1Q13009 1591 aa24.76■■□□□ 1.55
TVP23B-202ENST00000476139 FHAD1B1AJZ9 1412 aa24.75■■□□□ 1.55
TVP23B-202ENST00000476139 ABCA5Q8WWZ7 1642 aa24.73■■□□□ 1.55
TVP23B-202ENST00000476139 LRRC9Q6ZRR7 1453 aa24.72■■□□□ 1.55
TVP23B-202ENST00000476139 MAP3K1Q13233 1512 aa24.7■■□□□ 1.54
TVP23B-202ENST00000476139 PCF11O94913 1555 aaKnown RBP24.69■■□□□ 1.54
TVP23B-202ENST00000476139 DHX57Q6P158 1386 aaKnown RBP24.68■■□□□ 1.54
TVP23B-202ENST00000476139 PHLDB1Q86UU1 1377 aa24.67■■□□□ 1.54
TVP23B-202ENST00000476139 ZNF316A6NFI3 1004 aaPredicted RBP24.67■■□□□ 1.54
TVP23B-202ENST00000476139 TARBP1Q13395 1621 aaKnown RBP24.65■■□□□ 1.54
TVP23B-202ENST00000476139 CTTNBP2Q8WZ74 1663 aa24.64■■□□□ 1.54
TVP23B-202ENST00000476139 AQRO60306 1485 aaKnown RBP eCLIP24.63■■□□□ 1.53
TVP23B-202ENST00000476139 EFCAB5A4FU69 1503 aa24.63■■□□□ 1.53
TVP23B-202ENST00000476139 FAM50AQ14320 339 aaKnown RBP24.6■■□□□ 1.53
TVP23B-202ENST00000476139 CASKIN1Q8WXD9 1431 aa24.6■■□□□ 1.53
TVP23B-202ENST00000476139 NEUROD1Q13562 356 aa24.57■■□□□ 1.52
TVP23B-202ENST00000476139 FYCO1Q9BQS8 1478 aa24.57■■□□□ 1.52
TVP23B-202ENST00000476139 MRC2Q9UBG0 1479 aa24.57■■□□□ 1.52
TVP23B-202ENST00000476139 FMN1Q68DA7 1419 aa24.55■■□□□ 1.52
TVP23B-202ENST00000476139 CFAP43Q8NDM7 1665 aa24.53■■□□□ 1.52
TVP23B-202ENST00000476139 CLSPNQ9HAW4 1339 aa24.53■■□□□ 1.52
TVP23B-202ENST00000476139 RAB3GAP2Q9H2M9 1393 aa24.5■■□□□ 1.51
TVP23B-202ENST00000476139 SNAPC4Q5SXM2 1469 aa24.5■■□□□ 1.51
TVP23B-202ENST00000476139 ACIN1Q9UKV3 1341 aaKnown RBP24.5■■□□□ 1.51
TVP23B-202ENST00000476139 SAMD9Q5K651 1589 aa24.47■■□□□ 1.51
TVP23B-202ENST00000476139 ZNF608Q9ULD9 1512 aaPredicted RBP24.47■■□□□ 1.51
TVP23B-202ENST00000476139 PBRM1Q86U86 1689 aa24.43■■□□□ 1.5
TVP23B-202ENST00000476139 MTUS2Q5JR59 1369 aa24.42■■□□□ 1.5
TVP23B-202ENST00000476139 SETD5Q9C0A6 1442 aa24.41■■□□□ 1.5
TVP23B-202ENST00000476139 GRIN2BQ13224 1484 aa24.41■■□□□ 1.5
TVP23B-202ENST00000476139 YTHDC1Q96MU7 727 aaKnown RBP24.4■■□□□ 1.5
TVP23B-202ENST00000476139 IFT140Q96RY7 1462 aa24.37■■□□□ 1.49
TVP23B-202ENST00000476139 ADAMTS12P58397 1594 aa24.37■■□□□ 1.49
TVP23B-202ENST00000476139 WDR62O43379 1518 aa24.36■■□□□ 1.49
TVP23B-202ENST00000476139 LRRIQ1Q96JM4 1722 aa24.35■■□□□ 1.49
TVP23B-202ENST00000476139 ERCC6Q03468 1493 aa24.34■■□□□ 1.49
TVP23B-202ENST00000476139 CENPBP07199 599 aaPredicted RBP24.33■■□□□ 1.49
TVP23B-202ENST00000476139 ARID3CA6NKF2 412 aa24.33■■□□□ 1.48
TVP23B-202ENST00000476139 GTF3C3Q9Y5Q9 886 aa24.32■■□□□ 1.48
TVP23B-202ENST00000476139 FGD6Q6ZV73 1430 aa24.32■■□□□ 1.48
TVP23B-202ENST00000476139 IQGAP2Q13576 1575 aa24.31■■□□□ 1.48
TVP23B-202ENST00000476139 MIER1Q8N108 512 aa24.31■■□□□ 1.48
TVP23B-202ENST00000476139 MAPKBP1O60336 1514 aa24.29■■□□□ 1.48
TVP23B-202ENST00000476139 NCOA2Q15596 1464 aa24.27■■□□□ 1.48
TVP23B-202ENST00000476139 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.27■■□□□ 1.48
TVP23B-202ENST00000476139 SIN3AQ96ST3 1273 aa24.25■■□□□ 1.47
TVP23B-202ENST00000476139 MAGI3Q5TCQ9 1506 aa24.24■■□□□ 1.47
TVP23B-202ENST00000476139 PTPRKQ15262 1439 aa24.23■■□□□ 1.47
TVP23B-202ENST00000476139 MYOM3Q5VTT5 1437 aa24.2■■□□□ 1.47
TVP23B-202ENST00000476139 THOC2Q8NI27 1593 aaKnown RBP24.2■■□□□ 1.46
TVP23B-202ENST00000476139 EIF4G3O43432 1585 aaKnown RBP24.19■■□□□ 1.46
TVP23B-202ENST00000476139 FBLN2P98095 1184 aa24.19■■□□□ 1.46
TVP23B-202ENST00000476139 EPRSP07814 1512 aaKnown RBP24.16■■□□□ 1.46
TVP23B-202ENST00000476139 KIAA0586Q9BVV6 1533 aa24.16■■□□□ 1.46
TVP23B-202ENST00000476139 CHMP7Q8WUX9 453 aaPredicted RBP24.16■■□□□ 1.46
TVP23B-202ENST00000476139 CDK13Q14004 1512 aaKnown RBP24.16■■□□□ 1.46
TVP23B-202ENST00000476139 EHBP1L1Q8N3D4 1523 aa24.16■■□□□ 1.46
TVP23B-202ENST00000476139 UGGT2Q9NYU1 1516 aa24.16■■□□□ 1.46
TVP23B-202ENST00000476139 GRIN2AQ12879 1464 aa24.15■■□□□ 1.46
TVP23B-202ENST00000476139 CCDC18Q5T9S5 1454 aa24.15■■□□□ 1.46
TVP23B-202ENST00000476139 SUPT6HQ7KZ85 1726 aaKnown RBP24.15■■□□□ 1.46
TVP23B-202ENST00000476139 DISP1Q96F81 1524 aa24.13■■□□□ 1.45
TVP23B-202ENST00000476139 HECW1Q76N89 1606 aa24.12■■□□□ 1.45
TVP23B-202ENST00000476139 ARHGEF11O15085 1522 aa24.1■■□□□ 1.45
TVP23B-202ENST00000476139 CHIC2Q9UKJ5 165 aa24.09■■□□□ 1.45
TVP23B-202ENST00000476139 HFM1A2PYH4 1435 aa24.07■■□□□ 1.44
TVP23B-202ENST00000476139 RRP7BPQ9NSQ0 103 aa24.06■■□□□ 1.44
TVP23B-202ENST00000476139 PTPN23Q9H3S7 1636 aa24.06■■□□□ 1.44
TVP23B-202ENST00000476139 KIAA0556O60303 1618 aa24.05■■□□□ 1.44
TVP23B-202ENST00000476139 NAIPQ13075 1403 aa24.05■■□□□ 1.44
TVP23B-202ENST00000476139 MAGI1Q96QZ7 1491 aaPredicted RBP24.04■■□□□ 1.44
TVP23B-202ENST00000476139 SYNJ2O15056 1496 aa24.02■■□□□ 1.44
TVP23B-202ENST00000476139 CEP170Q5SW79 1584 aa24■■□□□ 1.43
TVP23B-202ENST00000476139 NUP153P49790 1475 aaKnown RBP23.99■■□□□ 1.43
TVP23B-202ENST00000476139 JPH4Q96JJ6 628 aa23.98■■□□□ 1.43
TVP23B-202ENST00000476139 UACAQ9BZF9 1416 aa23.97■■□□□ 1.43
TVP23B-202ENST00000476139 TCOF1Q13428 1488 aaKnown RBP23.96■■□□□ 1.43
TVP23B-202ENST00000476139 PPP1R15AO75807 674 aaPredicted RBP23.94■■□□□ 1.42
TVP23B-202ENST00000476139 ZNF644Q9H582 1327 aaPredicted RBP23.94■■□□□ 1.42
TVP23B-202ENST00000476139 PLB1Q6P1J6 1458 aa23.93■■□□□ 1.42
TVP23B-202ENST00000476139 TIMELESSQ9UNS1 1208 aa23.93■■□□□ 1.42
TVP23B-202ENST00000476139 MIA2Q96PC5 1412 aa23.92■■□□□ 1.42
TVP23B-202ENST00000476139 RAPGEF6Q8TEU7 1601 aa23.91■■□□□ 1.42
TVP23B-202ENST00000476139 HIRIP3Q9BW71 556 aaPredicted RBP23.9■■□□□ 1.42
TVP23B-202ENST00000476139 PELP1Q8IZL8 1130 aaKnown RBP23.9■■□□□ 1.42
TVP23B-202ENST00000476139 CDK11AQ9UQ88 783 aaPredicted RBP23.9■■□□□ 1.42
TVP23B-202ENST00000476139 NUP160Q12769 1436 aa23.89■■□□□ 1.41
TVP23B-202ENST00000476139 PRG4Q92954 1404 aaPredicted RBP23.88■■□□□ 1.41
TVP23B-202ENST00000476139 TRIM52Q96A61 297 aa23.88■■□□□ 1.41
TVP23B-202ENST00000476139 TONSLQ96HA7 1378 aa23.84■■□□□ 1.41
TVP23B-202ENST00000476139 CARMIL2Q6F5E8 1435 aa23.84■■□□□ 1.41
TVP23B-202ENST00000476139 KDM6BO15054 1643 aa23.83■■□□□ 1.4
TVP23B-202ENST00000476139 DDX10Q13206 875 aaKnown RBP23.79■■□□□ 1.4
TVP23B-202ENST00000476139 DAPK1P53355 1430 aa23.78■■□□□ 1.4
TVP23B-202ENST00000476139 DENND4BO75064 1496 aaPredicted RBP23.78■■□□□ 1.4
TVP23B-202ENST00000476139 ABCC5O15440 1437 aa23.78■■□□□ 1.4
TVP23B-202ENST00000476139 TROQ12816 1431 aaPredicted RBP23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms