RNA–Protein interactions for RNA: ENST00000475716.5

SNX5-208, Transcript of sorting nexin 5, humanhuman

TSL 3

Gene SNX5, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-208ENST00000475716 CHIC1Q5VXU3 224 aa18.19■□□□□ 0.5
SNX5-208ENST00000475716 ABCC10Q5T3U5 1492 aa18.18■□□□□ 0.5
SNX5-208ENST00000475716 SUPT5HO00267 1087 aaKnown RBP18.11■□□□□ 0.49
SNX5-208ENST00000475716 ERICH3Q5RHP9 1530 aa18.09■□□□□ 0.49
SNX5-208ENST00000475716 TOP2BQ02880 1626 aa18.05■□□□□ 0.48
SNX5-208ENST00000475716 DIP2BQ9P265 1576 aa18.05■□□□□ 0.48
SNX5-208ENST00000475716 MAPKBP1O60336 1514 aa18.05■□□□□ 0.48
SNX5-208ENST00000475716 KDM6BO15054 1643 aa18.02■□□□□ 0.48
SNX5-208ENST00000475716 BIVM-ERCC5R4GMW8 1640 aa18.02■□□□□ 0.48
SNX5-208ENST00000475716 ADCY10Q96PN6 1610 aa18.01■□□□□ 0.47
SNX5-208ENST00000475716 TTBK1Q5TCY1 1321 aaPredicted RBP18■□□□□ 0.47
SNX5-208ENST00000475716 TSPOAP1O95153 1857 aa17.98■□□□□ 0.47
SNX5-208ENST00000475716 RUSC2Q8N2Y8 1516 aa17.97■□□□□ 0.47
SNX5-208ENST00000475716 KIAA0586Q9BVV6 1533 aa17.92■□□□□ 0.46
SNX5-208ENST00000475716 IGF1RP08069 1367 aa17.91■□□□□ 0.46
SNX5-208ENST00000475716 PTPRGP23470 1445 aa17.9■□□□□ 0.46
SNX5-208ENST00000475716 ADGRL1O94910 1474 aa17.86■□□□□ 0.45
SNX5-208ENST00000475716 COL17A1Q9UMD9 1497 aaPredicted RBP17.85■□□□□ 0.45
SNX5-208ENST00000475716 ASXL2Q76L83 1435 aa17.83■□□□□ 0.45
SNX5-208ENST00000475716 TNIKQ9UKE5 1360 aa17.8■□□□□ 0.44
SNX5-208ENST00000475716 ABCC2Q92887 1545 aa17.8■□□□□ 0.44
SNX5-208ENST00000475716 PPRC1Q5VV67 1664 aaKnown RBP17.78■□□□□ 0.44
SNX5-208ENST00000475716 PLB1Q6P1J6 1458 aa17.78■□□□□ 0.44
SNX5-208ENST00000475716 GLI2P10070 1586 aa17.76■□□□□ 0.43
SNX5-208ENST00000475716 KIF27Q86VH2 1401 aa17.75■□□□□ 0.43
SNX5-208ENST00000475716 CARMIL1Q5VZK9 1371 aa17.75■□□□□ 0.43
SNX5-208ENST00000475716 HECW2Q9P2P5 1572 aa17.74■□□□□ 0.43
SNX5-208ENST00000475716 CARMIL2Q6F5E8 1435 aa17.74■□□□□ 0.43
SNX5-208ENST00000475716 UACAQ9BZF9 1416 aa17.72■□□□□ 0.43
SNX5-208ENST00000475716 EPRSP07814 1512 aaKnown RBP17.71■□□□□ 0.43
SNX5-208ENST00000475716 UHRF1BP1LA0JNW5 1464 aa17.7■□□□□ 0.42
SNX5-208ENST00000475716 CUL7Q14999 1698 aa17.67■□□□□ 0.42
SNX5-208ENST00000475716 DISP1Q96F81 1524 aa17.65■□□□□ 0.42
SNX5-208ENST00000475716 KDM5BQ9UGL1 1544 aa17.64■□□□□ 0.41
SNX5-208ENST00000475716 TEX14Q8IWB6 1497 aa17.63■□□□□ 0.41
SNX5-208ENST00000475716 MAP3K4Q9Y6R4 1608 aa17.62■□□□□ 0.41
SNX5-208ENST00000475716 KCNH8Q96L42 1107 aa17.62■□□□□ 0.41
SNX5-208ENST00000475716 FBXO41Q8TF61 875 aa17.61■□□□□ 0.41
SNX5-208ENST00000475716 IQGAP2Q13576 1575 aa17.61■□□□□ 0.41
SNX5-208ENST00000475716 ZCCHC11Q5TAX3 1644 aaKnown RBP17.56■□□□□ 0.4
SNX5-208ENST00000475716 CD109Q6YHK3 1445 aa17.55■□□□□ 0.4
SNX5-208ENST00000475716 WDR7Q9Y4E6 1490 aa17.53■□□□□ 0.4
SNX5-208ENST00000475716 UGGT2Q9NYU1 1516 aa17.51■□□□□ 0.39
SNX5-208ENST00000475716 MAGI3Q5TCQ9 1506 aa17.48■□□□□ 0.39
SNX5-208ENST00000475716 RAPGEF2Q9Y4G8 1499 aa17.47■□□□□ 0.39
SNX5-208ENST00000475716 KIAA0556O60303 1618 aa17.46■□□□□ 0.39
SNX5-208ENST00000475716 ARID3CA6NKF2 412 aa17.44■□□□□ 0.38
SNX5-208ENST00000475716 KIF21BO75037 1637 aa17.42■□□□□ 0.38
SNX5-208ENST00000475716 RAPGEF3O95398 923 aa17.41■□□□□ 0.38
SNX5-208ENST00000475716 PTPRMP28827 1452 aa17.4■□□□□ 0.38
SNX5-208ENST00000475716 CFAP43Q8NDM7 1665 aa17.38■□□□□ 0.37
SNX5-208ENST00000475716 ARAP3Q8WWN8 1544 aa17.37■□□□□ 0.37
SNX5-208ENST00000475716 ABCA8O94911 1581 aa17.36■□□□□ 0.37
SNX5-208ENST00000475716 P3H3Q8IVL6 736 aa17.35■□□□□ 0.37
SNX5-208ENST00000475716 ARID4BQ4LE39 1312 aaPredicted RBP17.34■□□□□ 0.37
SNX5-208ENST00000475716 ADAMTSL3P82987 1691 aa17.32■□□□□ 0.36
SNX5-208ENST00000475716 HSPA2P54652 639 aa17.31■□□□□ 0.36
SNX5-208ENST00000475716 ATP10BO94823 1461 aa17.31■□□□□ 0.36
SNX5-208ENST00000475716 GOLGA3Q08378 1498 aa17.31■□□□□ 0.36
SNX5-208ENST00000475716 PLPPR3Q6T4P5 718 aa17.3■□□□□ 0.36
SNX5-208ENST00000475716 LMTK3Q96Q04 1460 aa17.27■□□□□ 0.36
SNX5-208ENST00000475716 PHLDB1Q86UU1 1377 aa17.27■□□□□ 0.35
SNX5-208ENST00000475716 PCF11O94913 1555 aaKnown RBP17.25■□□□□ 0.35
SNX5-208ENST00000475716 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.24■□□□□ 0.35
SNX5-208ENST00000475716 HNRNPUL2Q1KMD3 747 aaKnown RBP17.24■□□□□ 0.35
SNX5-208ENST00000475716 CERKQ8TCT0 537 aa17.24■□□□□ 0.35
SNX5-208ENST00000475716 FAM9AQ8IZU1 332 aaPredicted RBP17.23■□□□□ 0.35
SNX5-208ENST00000475716 MADDQ8WXG6 1647 aa17.22■□□□□ 0.35
SNX5-208ENST00000475716 BCORL1Q5H9F3 1711 aa17.21■□□□□ 0.35
SNX5-208ENST00000475716 ILDR2Q71H61 639 aa17.21■□□□□ 0.35
SNX5-208ENST00000475716 CTTNBP2Q8WZ74 1663 aa17.2■□□□□ 0.34
SNX5-208ENST00000475716 NEO1Q92859 1461 aa17.19■□□□□ 0.34
SNX5-208ENST00000475716 ABCA9Q8IUA7 1624 aa17.19■□□□□ 0.34
SNX5-208ENST00000475716 PRXQ9BXM0 1461 aa17.17■□□□□ 0.34
SNX5-208ENST00000475716 FRMPD1Q5SYB0 1578 aa17.16■□□□□ 0.34
SNX5-208ENST00000475716 MLECQ14165 292 aa17.16■□□□□ 0.34
SNX5-208ENST00000475716 RIMS1Q86UR5 1692 aaKnown RBP17.13■□□□□ 0.33
SNX5-208ENST00000475716 RANGAP1P46060 587 aaPredicted RBP17.12■□□□□ 0.33
SNX5-208ENST00000475716 DISP3Q9P2K9 1392 aa17.11■□□□□ 0.33
SNX5-208ENST00000475716 AKNAQ7Z591 1439 aa17.11■□□□□ 0.33
SNX5-208ENST00000475716 DENND4BO75064 1496 aaPredicted RBP17.11■□□□□ 0.33
SNX5-208ENST00000475716 SOCS7O14512 581 aa17.1■□□□□ 0.33
SNX5-208ENST00000475716 PLEKHD1A6NEE1 506 aa17.09■□□□□ 0.33
SNX5-208ENST00000475716 YEATS2Q9ULM3 1422 aa17.08■□□□□ 0.32
SNX5-208ENST00000475716 FHOD3Q2V2M9 1422 aa17.07■□□□□ 0.32
SNX5-208ENST00000475716 CEBPAP49715 358 aaPredicted RBP17.07■□□□□ 0.32
SNX5-208ENST00000475716 ARHGEF40Q8TER5 1519 aa17.06■□□□□ 0.32
SNX5-208ENST00000475716 NUP153P49790 1475 aaKnown RBP17.05■□□□□ 0.32
SNX5-208ENST00000475716 POGZQ7Z3K3 1410 aa17.05■□□□□ 0.32
SNX5-208ENST00000475716 RAPGEF6Q8TEU7 1601 aa17.05■□□□□ 0.32
SNX5-208ENST00000475716 SIGLEC1Q9BZZ2 1709 aa17.04■□□□□ 0.32
SNX5-208ENST00000475716 FANCAO15360 1455 aa17.03■□□□□ 0.32
SNX5-208ENST00000475716 RICTORQ6R327 1708 aa17.01■□□□□ 0.31
SNX5-208ENST00000475716 CSRNP3Q8WYN3 585 aa17.01■□□□□ 0.31
SNX5-208ENST00000475716 SAMD9Q5K651 1589 aa17■□□□□ 0.31
SNX5-208ENST00000475716 ZFYVE16Q7Z3T8 1539 aa16.98■□□□□ 0.31
SNX5-208ENST00000475716 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.98■□□□□ 0.31
SNX5-208ENST00000475716 SCAPERQ9BY12 1400 aa16.96■□□□□ 0.31
SNX5-208ENST00000475716 DMRT2Q9Y5R5 561 aa16.96■□□□□ 0.31
SNX5-208ENST00000475716 MAGI2Q86UL8 1455 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms