RNA–Protein interactions for RNA: ENST00000473233.5

MCF2L2-208, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2L2, Length 4,748 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-208ENST00000473233 TSPY4P0CV99 314 aa22■■□□□ 1.11
MCF2L2-208ENST00000473233 TSPY10P0CW01 314 aa22■■□□□ 1.11
MCF2L2-208ENST00000473233 CHMP7Q8WUX9 453 aaPredicted RBP21.99■■□□□ 1.11
MCF2L2-208ENST00000473233 FHAD1B1AJZ9 1412 aa21.98■■□□□ 1.11
MCF2L2-208ENST00000473233 SMARCA4P51532 1647 aa21.97■■□□□ 1.11
MCF2L2-208ENST00000473233 TMC1Q8TDI8 760 aa21.96■■□□□ 1.11
MCF2L2-208ENST00000473233 KDM2AQ9Y2K7 1162 aa21.95■■□□□ 1.11
MCF2L2-208ENST00000473233 IRX6P78412 446 aaPredicted RBP21.94■■□□□ 1.1
MCF2L2-208ENST00000473233 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.92■■□□□ 1.1
MCF2L2-208ENST00000473233 SALL2Q9Y467 1007 aaPredicted RBP21.92■■□□□ 1.1
MCF2L2-208ENST00000473233 RAPGEF2Q9Y4G8 1499 aa21.91■■□□□ 1.1
MCF2L2-208ENST00000473233 ANP32AP39687 249 aaKnown RBP21.9■■□□□ 1.1
MCF2L2-208ENST00000473233 ATAD2BQ9ULI0 1458 aa21.89■■□□□ 1.09
MCF2L2-208ENST00000473233 SETD5Q9C0A6 1442 aa21.86■■□□□ 1.09
MCF2L2-208ENST00000473233 TIMELESSQ9UNS1 1208 aa21.85■■□□□ 1.09
MCF2L2-208ENST00000473233 CANXP27824 592 aaKnown RBP21.84■■□□□ 1.09
MCF2L2-208ENST00000473233 CCDC136Q96JN2 1154 aa21.83■■□□□ 1.08
MCF2L2-208ENST00000473233 CFDP1Q9UEE9 299 aaPredicted RBP21.82■■□□□ 1.08
MCF2L2-208ENST00000473233 PLEKHD1A6NEE1 506 aa21.82■■□□□ 1.08
MCF2L2-208ENST00000473233 NPM2Q86SE8 214 aaKnown RBP21.81■■□□□ 1.08
MCF2L2-208ENST00000473233 SUPT16HQ9Y5B9 1047 aaKnown RBP21.81■■□□□ 1.08
MCF2L2-208ENST00000473233 RAB3GAP2Q9H2M9 1393 aa21.81■■□□□ 1.08
MCF2L2-208ENST00000473233 CHGAP10645 457 aaKnown RBP21.75■■□□□ 1.07
MCF2L2-208ENST00000473233 ARHGAP35Q9NRY4 1499 aa21.72■■□□□ 1.07
MCF2L2-208ENST00000473233 RGL3Q3MIN7 710 aa21.69■■□□□ 1.06
MCF2L2-208ENST00000473233 CADPSQ9ULU8 1353 aa21.68■■□□□ 1.06
MCF2L2-208ENST00000473233 DHX57Q6P158 1386 aaKnown RBP21.67■■□□□ 1.06
MCF2L2-208ENST00000473233 SENP3-EIF4A1A0A087X0R7 540 aa21.67■■□□□ 1.06
MCF2L2-208ENST00000473233 TDRD9Q8NDG6 1382 aaKnown RBP21.66■■□□□ 1.06
MCF2L2-208ENST00000473233 KCNH8Q96L42 1107 aa21.65■■□□□ 1.06
MCF2L2-208ENST00000473233 CCER2I3L3R5 266 aa21.64■■□□□ 1.06
MCF2L2-208ENST00000473233 EIF4G1Q04637 1599 aaKnown RBP21.64■■□□□ 1.05
MCF2L2-208ENST00000473233 CARD11Q9BXL7 1154 aa21.64■■□□□ 1.05
MCF2L2-208ENST00000473233 PPP1R15AO75807 674 aaPredicted RBP21.63■■□□□ 1.05
MCF2L2-208ENST00000473233 NEFMP07197 916 aa21.62■■□□□ 1.05
MCF2L2-208ENST00000473233 WDR43Q15061 677 aaKnown RBP eCLIP21.62■■□□□ 1.05
MCF2L2-208ENST00000473233 FMN1Q68DA7 1419 aa21.61■■□□□ 1.05
MCF2L2-208ENST00000473233 NPM1P06748 294 aaKnown RBP eCLIP21.58■■□□□ 1.05
MCF2L2-208ENST00000473233 FHOD3Q2V2M9 1422 aa21.58■■□□□ 1.05
MCF2L2-208ENST00000473233 HSPA5P11021 654 aaKnown RBP21.57■■□□□ 1.04
MCF2L2-208ENST00000473233 ZBTB47Q9UFB7 747 aaPredicted RBP21.56■■□□□ 1.04
MCF2L2-208ENST00000473233 FOXD1Q16676 465 aa21.55■■□□□ 1.04
MCF2L2-208ENST00000473233 BCL11AQ9H165 835 aa21.55■■□□□ 1.04
MCF2L2-208ENST00000473233 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.53■■□□□ 1.04
MCF2L2-208ENST00000473233 NBR1Q14596 966 aa21.51■■□□□ 1.03
MCF2L2-208ENST00000473233 PPP4R2Q9NY27 417 aa21.5■■□□□ 1.03
MCF2L2-208ENST00000473233 MPHOSPH9Q99550 1183 aa21.5■■□□□ 1.03
MCF2L2-208ENST00000473233 PDS5BQ9NTI5 1447 aa21.49■■□□□ 1.03
MCF2L2-208ENST00000473233 ANP32EQ9BTT0 268 aa21.48■■□□□ 1.03
MCF2L2-208ENST00000473233 IGF1RP08069 1367 aa21.47■■□□□ 1.03
MCF2L2-208ENST00000473233 STAG3Q9UJ98 1225 aa21.46■■□□□ 1.03
MCF2L2-208ENST00000473233 DCAF11Q8TEB1 546 aa21.45■■□□□ 1.02
MCF2L2-208ENST00000473233 KIF21BO75037 1637 aa21.45■■□□□ 1.02
MCF2L2-208ENST00000473233 PKD2Q13563 968 aa21.42■■□□□ 1.02
MCF2L2-208ENST00000473233 ERCC6Q03468 1493 aa21.42■■□□□ 1.02
MCF2L2-208ENST00000473233 B4GALNT3Q6L9W6 998 aa21.41■■□□□ 1.02
MCF2L2-208ENST00000473233 KNSTRNQ9Y448 316 aa21.4■■□□□ 1.02
MCF2L2-208ENST00000473233 L3MBTL2Q969R5 705 aa21.4■■□□□ 1.02
MCF2L2-208ENST00000473233 UPF2Q9HAU5 1272 aaKnown RBP21.37■■□□□ 1.01
MCF2L2-208ENST00000473233 SLC24A1O60721 1099 aa21.37■■□□□ 1.01
MCF2L2-208ENST00000473233 FANCD2Q9BXW9 1451 aa21.36■■□□□ 1.01
MCF2L2-208ENST00000473233 CDCA8Q53HL2 280 aa21.36■■□□□ 1.01
MCF2L2-208ENST00000473233 SYNJ1O43426 1573 aa21.36■■□□□ 1.01
MCF2L2-208ENST00000473233 ESF1Q9H501 851 aaKnown RBP21.35■■□□□ 1.01
MCF2L2-208ENST00000473233 NCAPD3P42695 1498 aa21.33■■□□□ 1.01
MCF2L2-208ENST00000473233 RBM19Q9Y4C8 960 aaKnown RBP21.33■■□□□ 1
MCF2L2-208ENST00000473233 CC2D1BQ5T0F9 858 aaKnown RBP21.32■■□□□ 1
MCF2L2-208ENST00000473233 FGD5Q6ZNL6 1462 aa21.31■■□□□ 1
MCF2L2-208ENST00000473233 TSHZ2Q9NRE2 1034 aa21.29■■□□□ 1
MCF2L2-208ENST00000473233 SENP3Q9H4L4 574 aaPredicted RBP21.29■■□□□ 1
MCF2L2-208ENST00000473233 ARAP1Q96P48 1450 aa21.28■■□□□ 1
MCF2L2-208ENST00000473233 NUP155O75694 1391 aa21.27■□□□□ 0.99
MCF2L2-208ENST00000473233 PHLDB1Q86UU1 1377 aa21.26■□□□□ 0.99
MCF2L2-208ENST00000473233 CARMIL2Q6F5E8 1435 aa21.25■□□□□ 0.99
MCF2L2-208ENST00000473233 TMF1P82094 1093 aa21.24■□□□□ 0.99
MCF2L2-208ENST00000473233 ANKRD30AQ9BXX3 1397 aa21.23■□□□□ 0.99
MCF2L2-208ENST00000473233 RAD54L2Q9Y4B4 1467 aa21.22■□□□□ 0.99
MCF2L2-208ENST00000473233 ERICH3Q5RHP9 1530 aa21.21■□□□□ 0.99
MCF2L2-208ENST00000473233 CCDC18Q5T9S5 1454 aa21.21■□□□□ 0.99
MCF2L2-208ENST00000473233 HSP90AA1P07900 732 aaKnown RBP21.21■□□□□ 0.99
MCF2L2-208ENST00000473233 ERICH6BQ5W0A0 696 aa21.21■□□□□ 0.99
MCF2L2-208ENST00000473233 PRXQ9BXM0 1461 aa21.2■□□□□ 0.98
MCF2L2-208ENST00000473233 LRRC9Q6ZRR7 1453 aa21.19■□□□□ 0.98
MCF2L2-208ENST00000473233 NEUROD2Q15784 382 aa21.17■□□□□ 0.98
MCF2L2-208ENST00000473233 RRBP1Q9P2E9 1410 aaKnown RBP21.17■□□□□ 0.98
MCF2L2-208ENST00000473233 CFTRP13569 1480 aa21.16■□□□□ 0.98
MCF2L2-208ENST00000473233 DDRGK1Q96HY6 314 aa21.16■□□□□ 0.98
MCF2L2-208ENST00000473233 CFAP53Q96M91 514 aa21.16■□□□□ 0.98
MCF2L2-208ENST00000473233 FGD6Q6ZV73 1430 aa21.15■□□□□ 0.98
MCF2L2-208ENST00000473233 HNRNPMP52272 730 aaKnown RBP eCLIP21.14■□□□□ 0.97
MCF2L2-208ENST00000473233 JPH4Q96JJ6 628 aa21.14■□□□□ 0.97
MCF2L2-208ENST00000473233 NOP58Q9Y2X3 529 aaKnown RBP21.13■□□□□ 0.97
MCF2L2-208ENST00000473233 ROCK2O75116 1388 aaKnown RBP21.12■□□□□ 0.97
MCF2L2-208ENST00000473233 TOP2BQ02880 1626 aa21.11■□□□□ 0.97
MCF2L2-208ENST00000473233 PLPPR3Q6T4P5 718 aa21.11■□□□□ 0.97
MCF2L2-208ENST00000473233 GAPVD1Q14C86 1478 aa21.11■□□□□ 0.97
MCF2L2-208ENST00000473233 TNNT2P45379 298 aaPredicted RBP21.11■□□□□ 0.97
MCF2L2-208ENST00000473233 RALBP1Q15311 655 aa21.11■□□□□ 0.97
MCF2L2-208ENST00000473233 KTN1Q86UP2 1357 aaKnown RBP21.11■□□□□ 0.97
MCF2L2-208ENST00000473233 PRKRIP1Q9H875 184 aaPredicted RBP21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms