RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 JPH4Q96JJ6 628 aa16.27■□□□□ 0.2
APTX-216ENST00000472896 PRG4Q92954 1404 aaPredicted RBP16.27■□□□□ 0.19
APTX-216ENST00000472896 FAM69CQ0P6D2 419 aa16.26■□□□□ 0.19
APTX-216ENST00000472896 KDM4FA0A1W2PPD8 638 aa16.22■□□□□ 0.19
APTX-216ENST00000472896 ABCC10Q5T3U5 1492 aa16.2■□□□□ 0.18
APTX-216ENST00000472896 PCGF6Q9BYE7 350 aa16.2■□□□□ 0.18
APTX-216ENST00000472896 ERICH3Q5RHP9 1530 aa16.18■□□□□ 0.18
APTX-216ENST00000472896 TOP2BQ02880 1626 aa16.17■□□□□ 0.18
APTX-216ENST00000472896 SUPT5HO00267 1087 aaKnown RBP16.17■□□□□ 0.18
APTX-216ENST00000472896 NPM1P06748 294 aaKnown RBP eCLIP16.17■□□□□ 0.18
APTX-216ENST00000472896 PPARGC1BQ86YN6 1023 aaKnown RBP16.16■□□□□ 0.18
APTX-216ENST00000472896 BIVM-ERCC5R4GMW8 1640 aa16.16■□□□□ 0.18
APTX-216ENST00000472896 ILDR1Q86SU0 546 aaPredicted RBP16.12■□□□□ 0.17
APTX-216ENST00000472896 DIP2BQ9P265 1576 aa16.11■□□□□ 0.17
APTX-216ENST00000472896 MAPKBP1O60336 1514 aa16.11■□□□□ 0.17
APTX-216ENST00000472896 ADCY10Q96PN6 1610 aa16.1■□□□□ 0.17
APTX-216ENST00000472896 RUSC2Q8N2Y8 1516 aa16.08■□□□□ 0.16
APTX-216ENST00000472896 KDM6BO15054 1643 aa16.06■□□□□ 0.16
APTX-216ENST00000472896 TSPOAP1O95153 1857 aa16.05■□□□□ 0.16
APTX-216ENST00000472896 KIAA0586Q9BVV6 1533 aa16■□□□□ 0.15
APTX-216ENST00000472896 IGF1RP08069 1367 aa15.99■□□□□ 0.15
APTX-216ENST00000472896 ZEB1P37275 1124 aaPredicted RBP15.98■□□□□ 0.15
APTX-216ENST00000472896 TTBK1Q5TCY1 1321 aaPredicted RBP15.98■□□□□ 0.15
APTX-216ENST00000472896 PTPRGP23470 1445 aa15.96■□□□□ 0.15
APTX-216ENST00000472896 ADGRL1O94910 1474 aa15.9■□□□□ 0.14
APTX-216ENST00000472896 COL17A1Q9UMD9 1497 aaPredicted RBP15.9■□□□□ 0.14
APTX-216ENST00000472896 ASXL2Q76L83 1435 aa15.9■□□□□ 0.14
APTX-216ENST00000472896 PPRC1Q5VV67 1664 aaKnown RBP15.89■□□□□ 0.14
APTX-216ENST00000472896 SCAF1Q9H7N4 1312 aaKnown RBP15.89■□□□□ 0.13
APTX-216ENST00000472896 ABCC2Q92887 1545 aa15.88■□□□□ 0.13
APTX-216ENST00000472896 TNIKQ9UKE5 1360 aa15.88■□□□□ 0.13
APTX-216ENST00000472896 TRIM26Q12899 539 aaPredicted RBP15.87■□□□□ 0.13
APTX-216ENST00000472896 GLI2P10070 1586 aa15.86■□□□□ 0.13
APTX-216ENST00000472896 KIF27Q86VH2 1401 aa15.86■□□□□ 0.13
APTX-216ENST00000472896 PLB1Q6P1J6 1458 aa15.86■□□□□ 0.13
APTX-216ENST00000472896 CARMIL1Q5VZK9 1371 aa15.85■□□□□ 0.13
APTX-216ENST00000472896 CUL7Q14999 1698 aa15.83■□□□□ 0.13
APTX-216ENST00000472896 CARMIL2Q6F5E8 1435 aa15.83■□□□□ 0.12
APTX-216ENST00000472896 UHRF1BP1LA0JNW5 1464 aa15.81■□□□□ 0.12
APTX-216ENST00000472896 UACAQ9BZF9 1416 aa15.81■□□□□ 0.12
APTX-216ENST00000472896 EPRSP07814 1512 aaKnown RBP15.79■□□□□ 0.12
APTX-216ENST00000472896 HECW2Q9P2P5 1572 aa15.79■□□□□ 0.12
APTX-216ENST00000472896 DISP1Q96F81 1524 aa15.77■□□□□ 0.12
APTX-216ENST00000472896 MAP3K4Q9Y6R4 1608 aa15.76■□□□□ 0.11
APTX-216ENST00000472896 IQGAP2Q13576 1575 aa15.75■□□□□ 0.11
APTX-216ENST00000472896 KDM5BQ9UGL1 1544 aa15.75■□□□□ 0.11
APTX-216ENST00000472896 TEX14Q8IWB6 1497 aa15.72■□□□□ 0.11
APTX-216ENST00000472896 ZCCHC11Q5TAX3 1644 aaKnown RBP15.7■□□□□ 0.1
APTX-216ENST00000472896 FOXD1Q16676 465 aa15.68■□□□□ 0.1
APTX-216ENST00000472896 UGGT2Q9NYU1 1516 aa15.67■□□□□ 0.1
APTX-216ENST00000472896 KCNH8Q96L42 1107 aa15.66■□□□□ 0.1
APTX-216ENST00000472896 WDR7Q9Y4E6 1490 aa15.65■□□□□ 0.1
APTX-216ENST00000472896 CD109Q6YHK3 1445 aa15.63■□□□□ 0.09
APTX-216ENST00000472896 KIAA0556O60303 1618 aa15.62■□□□□ 0.09
APTX-216ENST00000472896 FBXO41Q8TF61 875 aa15.62■□□□□ 0.09
APTX-216ENST00000472896 RAPGEF2Q9Y4G8 1499 aa15.62■□□□□ 0.09
APTX-216ENST00000472896 MAGI3Q5TCQ9 1506 aa15.61■□□□□ 0.09
APTX-216ENST00000472896 ACIN1Q9UKV3 1341 aaKnown RBP15.59■□□□□ 0.09
APTX-216ENST00000472896 KIF21BO75037 1637 aa15.55■□□□□ 0.08
APTX-216ENST00000472896 CFAP43Q8NDM7 1665 aa15.54■□□□□ 0.08
APTX-216ENST00000472896 ABCA8O94911 1581 aa15.54■□□□□ 0.08
APTX-216ENST00000472896 ARID3CA6NKF2 412 aa15.52■□□□□ 0.08
APTX-216ENST00000472896 ARAP3Q8WWN8 1544 aa15.51■□□□□ 0.07
APTX-216ENST00000472896 PTPRMP28827 1452 aa15.49■□□□□ 0.07
APTX-216ENST00000472896 LOC105371045A0A1W2PR82 267 aa15.49■□□□□ 0.07
APTX-216ENST00000472896 RAPGEF3O95398 923 aa15.49■□□□□ 0.07
APTX-216ENST00000472896 ADAMTSL3P82987 1691 aa15.47■□□□□ 0.07
APTX-216ENST00000472896 GOLGA3Q08378 1498 aa15.47■□□□□ 0.07
APTX-216ENST00000472896 P3H3Q8IVL6 736 aa15.46■□□□□ 0.07
APTX-216ENST00000472896 ATP10BO94823 1461 aa15.45■□□□□ 0.06
APTX-216ENST00000472896 CENPBP07199 599 aaPredicted RBP15.45■□□□□ 0.06
APTX-216ENST00000472896 CTTNBP2Q8WZ74 1663 aa15.44■□□□□ 0.06
APTX-216ENST00000472896 ARID4BQ4LE39 1312 aaPredicted RBP15.4■□□□□ 0.06
APTX-216ENST00000472896 PHLDB1Q86UU1 1377 aa15.4■□□□□ 0.06
APTX-216ENST00000472896 NEUROD1Q13562 356 aa15.39■□□□□ 0.05
APTX-216ENST00000472896 LMTK3Q96Q04 1460 aa15.38■□□□□ 0.05
APTX-216ENST00000472896 BCORL1Q5H9F3 1711 aa15.38■□□□□ 0.05
APTX-216ENST00000472896 ABCA9Q8IUA7 1624 aa15.37■□□□□ 0.05
APTX-216ENST00000472896 PRXQ9BXM0 1461 aa15.37■□□□□ 0.05
APTX-216ENST00000472896 HSPA2P54652 639 aa15.37■□□□□ 0.05
APTX-216ENST00000472896 PCF11O94913 1555 aaKnown RBP15.37■□□□□ 0.05
APTX-216ENST00000472896 MADDQ8WXG6 1647 aa15.36■□□□□ 0.05
APTX-216ENST00000472896 POTEDQ86YR6 584 aa15.36■□□□□ 0.05
APTX-216ENST00000472896 FRMPD1Q5SYB0 1578 aa15.35■□□□□ 0.05
APTX-216ENST00000472896 NEO1Q92859 1461 aa15.35■□□□□ 0.05
APTX-216ENST00000472896 GTF3C3Q9Y5Q9 886 aa15.34■□□□□ 0.05
APTX-216ENST00000472896 PLPPR3Q6T4P5 718 aa15.34■□□□□ 0.05
APTX-216ENST00000472896 FAM9AQ8IZU1 332 aaPredicted RBP15.33■□□□□ 0.04
APTX-216ENST00000472896 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.32■□□□□ 0.04
APTX-216ENST00000472896 HNRNPUL2Q1KMD3 747 aaKnown RBP15.32■□□□□ 0.04
APTX-216ENST00000472896 CERKQ8TCT0 537 aa15.3■□□□□ 0.04
APTX-216ENST00000472896 RIMS1Q86UR5 1692 aaKnown RBP15.3■□□□□ 0.04
APTX-216ENST00000472896 RAPGEF6Q8TEU7 1601 aa15.26■□□□□ 0.03
APTX-216ENST00000472896 DENND4BO75064 1496 aaPredicted RBP15.26■□□□□ 0.03
APTX-216ENST00000472896 AKNAQ7Z591 1439 aa15.25■□□□□ 0.03
APTX-216ENST00000472896 NUP153P49790 1475 aaKnown RBP15.25■□□□□ 0.03
APTX-216ENST00000472896 ILDR2Q71H61 639 aa15.24■□□□□ 0.03
APTX-216ENST00000472896 ARHGEF40Q8TER5 1519 aa15.24■□□□□ 0.03
APTX-216ENST00000472896 FHOD3Q2V2M9 1422 aa15.24■□□□□ 0.03
APTX-216ENST00000472896 SIGLEC1Q9BZZ2 1709 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms