RNA–Protein interactions for RNA: ENST00000472765.6

CCT3-211, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

TSL 2 BASIC

Gene CCT3, Length 1,858 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-211ENST00000472765 WDR97A6NE52 1622 aa18.86■□□□□ 0.61
CCT3-211ENST00000472765 FHAD1B1AJZ9 1412 aa18.8■□□□□ 0.6
CCT3-211ENST00000472765 CCER2I3L3R5 266 aa18.8■□□□□ 0.6
CCT3-211ENST00000472765 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.78■□□□□ 0.6
CCT3-211ENST00000472765 PPP1R15AO75807 674 aaPredicted RBP18.77■□□□□ 0.6
CCT3-211ENST00000472765 IGF1RP08069 1367 aa18.77■□□□□ 0.59
CCT3-211ENST00000472765 PCF11O94913 1555 aaKnown RBP18.75■□□□□ 0.59
CCT3-211ENST00000472765 KCNH8Q96L42 1107 aa18.75■□□□□ 0.59
CCT3-211ENST00000472765 PHLDB1Q86UU1 1377 aa18.75■□□□□ 0.59
CCT3-211ENST00000472765 ITGAEP38570 1179 aa18.72■□□□□ 0.59
CCT3-211ENST00000472765 FKBP8Q14318 412 aa18.71■□□□□ 0.59
CCT3-211ENST00000472765 EFCAB5A4FU69 1503 aa18.7■□□□□ 0.58
CCT3-211ENST00000472765 AQRO60306 1485 aaKnown RBP eCLIP18.7■□□□□ 0.585e-8■■■■■ 30.7
CCT3-211ENST00000472765 NEFLP07196 543 aa18.7■□□□□ 0.58
CCT3-211ENST00000472765 FYCO1Q9BQS8 1478 aa18.7■□□□□ 0.58
CCT3-211ENST00000472765 CARMIL1Q5VZK9 1371 aa18.7■□□□□ 0.58
CCT3-211ENST00000472765 DDX10Q13206 875 aaKnown RBP18.69■□□□□ 0.58
CCT3-211ENST00000472765 FGD5Q6ZNL6 1462 aa18.65■□□□□ 0.58
CCT3-211ENST00000472765 ANP32CO43423 234 aa18.63■□□□□ 0.57
CCT3-211ENST00000472765 SIN3AQ96ST3 1273 aa18.63■□□□□ 0.57
CCT3-211ENST00000472765 CASKIN1Q8WXD9 1431 aa18.62■□□□□ 0.57
CCT3-211ENST00000472765 BCANQ96GW7 911 aa18.61■□□□□ 0.57
CCT3-211ENST00000472765 CTTNBP2Q8WZ74 1663 aa18.6■□□□□ 0.57
CCT3-211ENST00000472765 CC2D2AQ9P2K1 1620 aa18.6■□□□□ 0.57
CCT3-211ENST00000472765 FAM50AQ14320 339 aaKnown RBP18.58■□□□□ 0.57
CCT3-211ENST00000472765 RBM19Q9Y4C8 960 aaKnown RBP18.58■□□□□ 0.57
CCT3-211ENST00000472765 CUL7Q14999 1698 aa18.58■□□□□ 0.57
CCT3-211ENST00000472765 PTPN23Q9H3S7 1636 aa18.56■□□□□ 0.56
CCT3-211ENST00000472765 CCDC18Q5T9S5 1454 aa18.55■□□□□ 0.56
CCT3-211ENST00000472765 UACAQ9BZF9 1416 aa18.55■□□□□ 0.56
CCT3-211ENST00000472765 FGD6Q6ZV73 1430 aa18.54■□□□□ 0.56
CCT3-211ENST00000472765 CADPSQ9ULU8 1353 aa18.54■□□□□ 0.56
CCT3-211ENST00000472765 HFM1A2PYH4 1435 aa18.54■□□□□ 0.56
CCT3-211ENST00000472765 TONSLQ96HA7 1378 aa18.53■□□□□ 0.56
CCT3-211ENST00000472765 DNAJC5BQ9UF47 199 aa18.52■□□□□ 0.55
CCT3-211ENST00000472765 THOC2Q8NI27 1593 aaKnown RBP18.5■□□□□ 0.55
CCT3-211ENST00000472765 FHOD3Q2V2M9 1422 aa18.5■□□□□ 0.55
CCT3-211ENST00000472765 BCL11AQ9H165 835 aa18.5■□□□□ 0.55
CCT3-211ENST00000472765 ABCA10Q8WWZ4 1543 aa18.49■□□□□ 0.55
CCT3-211ENST00000472765 FMN1Q68DA7 1419 aa18.49■□□□□ 0.55
CCT3-211ENST00000472765 KDM5BQ9UGL1 1544 aa18.49■□□□□ 0.55
CCT3-211ENST00000472765 DNMBPQ6XZF7 1577 aa18.49■□□□□ 0.55
CCT3-211ENST00000472765 SNAPC4Q5SXM2 1469 aa18.47■□□□□ 0.55
CCT3-211ENST00000472765 ERICH6BQ5W0A0 696 aa18.47■□□□□ 0.55
CCT3-211ENST00000472765 TRIM52Q96A61 297 aa18.47■□□□□ 0.55
CCT3-211ENST00000472765 FANCIQ9NVI1 1328 aa18.46■□□□□ 0.55
CCT3-211ENST00000472765 KIF21AQ7Z4S6 1674 aa18.45■□□□□ 0.54
CCT3-211ENST00000472765 SAMD9Q5K651 1589 aa18.44■□□□□ 0.54
CCT3-211ENST00000472765 GCC2Q8IWJ2 1684 aa18.44■□□□□ 0.54
CCT3-211ENST00000472765 HECW1Q76N89 1606 aa18.43■□□□□ 0.54
CCT3-211ENST00000472765 SUPT6HQ7KZ85 1726 aaKnown RBP18.43■□□□□ 0.54
CCT3-211ENST00000472765 LRRIQ1Q96JM4 1722 aa18.42■□□□□ 0.54
CCT3-211ENST00000472765 NCOA2Q15596 1464 aa18.42■□□□□ 0.54
CCT3-211ENST00000472765 NAIPQ13075 1403 aa18.41■□□□□ 0.54
CCT3-211ENST00000472765 EHBP1L1Q8N3D4 1523 aa18.41■□□□□ 0.54
CCT3-211ENST00000472765 PTPRKQ15262 1439 aa18.39■□□□□ 0.53
CCT3-211ENST00000472765 MYOM3Q5VTT5 1437 aa18.39■□□□□ 0.53
CCT3-211ENST00000472765 HIRIP3Q9BW71 556 aaPredicted RBP18.38■□□□□ 0.53
CCT3-211ENST00000472765 FANCD2Q9BXW9 1451 aa18.37■□□□□ 0.53
CCT3-211ENST00000472765 GRIN2BQ13224 1484 aa18.37■□□□□ 0.53
CCT3-211ENST00000472765 AKNAQ7Z591 1439 aa18.37■□□□□ 0.53
CCT3-211ENST00000472765 ARHGEF11O15085 1522 aa18.36■□□□□ 0.53
CCT3-211ENST00000472765 MTUS2Q5JR59 1369 aa18.36■□□□□ 0.53
CCT3-211ENST00000472765 CDK11AQ9UQ88 783 aaPredicted RBP18.35■□□□□ 0.53
CCT3-211ENST00000472765 TOPBP1Q92547 1522 aa18.35■□□□□ 0.53
CCT3-211ENST00000472765 POLA1P09884 1462 aaPredicted RBP18.35■□□□□ 0.53
CCT3-211ENST00000472765 UGGT2Q9NYU1 1516 aa18.34■□□□□ 0.53
CCT3-211ENST00000472765 MSH5O43196 834 aa18.34■□□□□ 0.53
CCT3-211ENST00000472765 P3H3Q8IVL6 736 aa18.34■□□□□ 0.53
CCT3-211ENST00000472765 TCOF1Q13428 1488 aaKnown RBP18.34■□□□□ 0.53
CCT3-211ENST00000472765 CNTLNQ9NXG0 1405 aa18.33■□□□□ 0.52
CCT3-211ENST00000472765 POLR1AO95602 1720 aaPredicted RBP18.32■□□□□ 0.52
CCT3-211ENST00000472765 ATP1B4Q9UN42 357 aaPredicted RBP18.32■□□□□ 0.52
CCT3-211ENST00000472765 HNRNPUQ00839 825 aaKnown RBP eCLIP18.31■□□□□ 0.52
CCT3-211ENST00000472765 RAD54L2Q9Y4B4 1467 aa18.3■□□□□ 0.52
CCT3-211ENST00000472765 MYT1LQ9UL68 1186 aa18.3■□□□□ 0.52
CCT3-211ENST00000472765 ABCA5Q8WWZ7 1642 aa18.28■□□□□ 0.52
CCT3-211ENST00000472765 PPP4R2Q9NY27 417 aa18.28■□□□□ 0.52
CCT3-211ENST00000472765 WASHC2AQ641Q2 1341 aa18.26■□□□□ 0.51
CCT3-211ENST00000472765 DENND4BO75064 1496 aaPredicted RBP18.25■□□□□ 0.51
CCT3-211ENST00000472765 HSPA5P11021 654 aaKnown RBP18.24■□□□□ 0.51
CCT3-211ENST00000472765 NCOA1Q15788 1441 aa18.23■□□□□ 0.51
CCT3-211ENST00000472765 ERICH6Q7L0X2 663 aa18.22■□□□□ 0.51
CCT3-211ENST00000472765 EIF4G2P78344 907 aaKnown RBP eCLIP18.21■□□□□ 0.51
CCT3-211ENST00000472765 ZBED9Q6R2W3 1325 aa18.19■□□□□ 0.5
CCT3-211ENST00000472765 MAGI3Q5TCQ9 1506 aa18.19■□□□□ 0.5
CCT3-211ENST00000472765 CCDC7Q96M83 1385 aa18.18■□□□□ 0.5
CCT3-211ENST00000472765 MIA2Q96PC5 1412 aa18.18■□□□□ 0.5
CCT3-211ENST00000472765 KDM6BO15054 1643 aa18.16■□□□□ 0.5
CCT3-211ENST00000472765 LAMC3Q9Y6N6 1575 aa18.14■□□□□ 0.49
CCT3-211ENST00000472765 PRKRIP1Q9H875 184 aaPredicted RBP18.14■□□□□ 0.49
CCT3-211ENST00000472765 IRX6P78412 446 aaPredicted RBP18.13■□□□□ 0.49
CCT3-211ENST00000472765 RPRD2Q5VT52 1461 aaKnown RBP18.12■□□□□ 0.49
CCT3-211ENST00000472765 NESP48681 1621 aa18.12■□□□□ 0.49
CCT3-211ENST00000472765 TEX14Q8IWB6 1497 aa18.12■□□□□ 0.49
CCT3-211ENST00000472765 GAPVD1Q14C86 1478 aa18.11■□□□□ 0.49
CCT3-211ENST00000472765 URB2Q14146 1524 aaKnown RBP18.1■□□□□ 0.49
CCT3-211ENST00000472765 ROCK1Q13464 1354 aa18.1■□□□□ 0.49
CCT3-211ENST00000472765 SPATA31E1Q6ZUB1 1445 aa18.09■□□□□ 0.49
CCT3-211ENST00000472765 SMG6Q86US8 1419 aaKnown RBP18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms