RNA–Protein interactions for RNA: ENST00000472765.6

CCT3-211, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

TSL 2 BASIC

Gene CCT3, Length 1,858 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-211ENST00000472765 NISCHQ9Y2I1 1504 aa26.4■■□□□ 1.82
CCT3-211ENST00000472765 SHROOM4Q9ULL8 1493 aa22.47■■□□□ 1.19
CCT3-211ENST00000472765 ZCCHC6Q5VYS8 1495 aaKnown RBP22.47■■□□□ 1.19
CCT3-211ENST00000472765 CCDC180Q9P1Z9 1646 aa22.45■■□□□ 1.18
CCT3-211ENST00000472765 SUPT5HO00267 1087 aaKnown RBP22.23■■□□□ 1.15
CCT3-211ENST00000472765 HRCP23327 699 aa22.11■■□□□ 1.13
CCT3-211ENST00000472765 MYO15BQ96JP2 1530 aa22.05■■□□□ 1.12
CCT3-211ENST00000472765 CHIC1Q5VXU3 224 aa21.99■■□□□ 1.11
CCT3-211ENST00000472765 DCAF1Q9Y4B6 1507 aa21.83■■□□□ 1.09
CCT3-211ENST00000472765 PCGF6Q9BYE7 350 aa21.62■■□□□ 1.05
CCT3-211ENST00000472765 PPARGC1BQ86YN6 1023 aaKnown RBP21.35■■□□□ 1.01
CCT3-211ENST00000472765 ABCC9O60706 1549 aa21.33■■□□□ 1
CCT3-211ENST00000472765 DCAF8L2P0C7V8 631 aa21.31■■□□□ 1
CCT3-211ENST00000472765 TRIM26Q12899 539 aaPredicted RBP21.28■■□□□ 1
CCT3-211ENST00000472765 LOC105371045A0A1W2PR82 267 aa21.19■□□□□ 0.98
CCT3-211ENST00000472765 ZEB1P37275 1124 aaPredicted RBP21.14■□□□□ 0.97
CCT3-211ENST00000472765 RSF1Q96T23 1441 aaPredicted RBP20.98■□□□□ 0.95
CCT3-211ENST00000472765 RB1CC1Q8TDY2 1594 aa20.96■□□□□ 0.95
CCT3-211ENST00000472765 PELP1Q8IZL8 1130 aaKnown RBP20.95■□□□□ 0.94
CCT3-211ENST00000472765 SCRIBQ14160 1630 aa20.85■□□□□ 0.93
CCT3-211ENST00000472765 TRIM41Q8WV44 630 aa20.78■□□□□ 0.92
CCT3-211ENST00000472765 SCAF1Q9H7N4 1312 aaKnown RBP20.57■□□□□ 0.88
CCT3-211ENST00000472765 NACADO15069 1562 aa20.55■□□□□ 0.88
CCT3-211ENST00000472765 EIF4G1Q04637 1599 aaKnown RBP20.49■□□□□ 0.87
CCT3-211ENST00000472765 MROH2BQ7Z745 1585 aa20.47■□□□□ 0.87
CCT3-211ENST00000472765 FAM9AQ8IZU1 332 aaPredicted RBP20.47■□□□□ 0.87
CCT3-211ENST00000472765 BAZ1AQ9NRL2 1556 aaPredicted RBP20.46■□□□□ 0.87
CCT3-211ENST00000472765 CECR2Q9BXF3 1484 aa20.43■□□□□ 0.86
CCT3-211ENST00000472765 WIZO95785 1651 aa20.41■□□□□ 0.86
CCT3-211ENST00000472765 WRNQ14191 1432 aaPredicted RBP eCLIP20.33■□□□□ 0.85
CCT3-211ENST00000472765 ACIN1Q9UKV3 1341 aaKnown RBP20.3■□□□□ 0.84
CCT3-211ENST00000472765 CCER1Q8TC90 406 aaPredicted RBP20.22■□□□□ 0.83
CCT3-211ENST00000472765 TOP2AP11388 1531 aaKnown RBP20.21■□□□□ 0.83
CCT3-211ENST00000472765 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.17■□□□□ 0.82
CCT3-211ENST00000472765 CENPBP07199 599 aaPredicted RBP20.16■□□□□ 0.82
CCT3-211ENST00000472765 EHMT2Q96KQ7 1210 aa20.13■□□□□ 0.81
CCT3-211ENST00000472765 NEUROD1Q13562 356 aa20.13■□□□□ 0.81
CCT3-211ENST00000472765 EEA1Q15075 1411 aa20.12■□□□□ 0.81
CCT3-211ENST00000472765 MYT1Q01538 1121 aa20.11■□□□□ 0.81
CCT3-211ENST00000472765 DIEXFQ68CQ4 756 aaKnown RBP20.11■□□□□ 0.81
CCT3-211ENST00000472765 CEP162Q5TB80 1403 aa20.1■□□□□ 0.81
CCT3-211ENST00000472765 TNIKQ9UKE5 1360 aa20.1■□□□□ 0.81
CCT3-211ENST00000472765 SMARCA2P51531 1590 aa20.07■□□□□ 0.8
CCT3-211ENST00000472765 SMARCA4P51532 1647 aa20.06■□□□□ 0.8
CCT3-211ENST00000472765 ABCC8Q09428 1581 aa20.04■□□□□ 0.8
CCT3-211ENST00000472765 CCDC88BA6NC98 1476 aa20.03■□□□□ 0.8
CCT3-211ENST00000472765 GTF3C3Q9Y5Q9 886 aa19.97■□□□□ 0.79
CCT3-211ENST00000472765 GOLGA3Q08378 1498 aa19.91■□□□□ 0.78
CCT3-211ENST00000472765 ZNF316A6NFI3 1004 aaPredicted RBP19.9■□□□□ 0.78
CCT3-211ENST00000472765 SOGA1O94964 1423 aa19.9■□□□□ 0.78
CCT3-211ENST00000472765 KIF21BO75037 1637 aa19.85■□□□□ 0.77
CCT3-211ENST00000472765 UNC13AQ9UPW8 1703 aa19.84■□□□□ 0.77
CCT3-211ENST00000472765 CSRNP3Q8WYN3 585 aa19.84■□□□□ 0.77
CCT3-211ENST00000472765 RUSC2Q8N2Y8 1516 aa19.76■□□□□ 0.75
CCT3-211ENST00000472765 CEP164Q9UPV0 1460 aa19.76■□□□□ 0.75
CCT3-211ENST00000472765 PEG3Q9GZU2 1588 aa19.74■□□□□ 0.75
CCT3-211ENST00000472765 BAZ1BQ9UIG0 1483 aaKnown RBP19.71■□□□□ 0.75
CCT3-211ENST00000472765 UBTFP17480 764 aaKnown RBP19.69■□□□□ 0.74
CCT3-211ENST00000472765 VPS8Q8N3P4 1428 aa19.66■□□□□ 0.74
CCT3-211ENST00000472765 TTBK1Q5TCY1 1321 aaPredicted RBP19.66■□□□□ 0.74
CCT3-211ENST00000472765 SYNJ1O43426 1573 aa19.64■□□□□ 0.73
CCT3-211ENST00000472765 CLIP1P30622 1438 aa19.62■□□□□ 0.73
CCT3-211ENST00000472765 CLSPNQ9HAW4 1339 aa19.57■□□□□ 0.72
CCT3-211ENST00000472765 MIER1Q8N108 512 aa19.57■□□□□ 0.72
CCT3-211ENST00000472765 BICRAQ9NZM4 1560 aa19.5■□□□□ 0.71
CCT3-211ENST00000472765 YTHDC1Q96MU7 727 aaKnown RBP19.5■□□□□ 0.71
CCT3-211ENST00000472765 HNRNPUL2Q1KMD3 747 aaKnown RBP19.48■□□□□ 0.71
CCT3-211ENST00000472765 ERICH3Q5RHP9 1530 aa19.44■□□□□ 0.7
CCT3-211ENST00000472765 RAPGEF2Q9Y4G8 1499 aa19.44■□□□□ 0.7
CCT3-211ENST00000472765 TOP2BQ02880 1626 aa19.44■□□□□ 0.7
CCT3-211ENST00000472765 APLP2Q06481 763 aa19.43■□□□□ 0.7
CCT3-211ENST00000472765 BIVM-ERCC5R4GMW8 1640 aa19.42■□□□□ 0.7
CCT3-211ENST00000472765 DHX57Q6P158 1386 aaKnown RBP19.36■□□□□ 0.69
CCT3-211ENST00000472765 ATAD2BQ9ULI0 1458 aa19.36■□□□□ 0.69
CCT3-211ENST00000472765 CUX2O14529 1486 aa19.34■□□□□ 0.69
CCT3-211ENST00000472765 ARAP1Q96P48 1450 aa19.31■□□□□ 0.68
CCT3-211ENST00000472765 PRXQ9BXM0 1461 aa19.3■□□□□ 0.68
CCT3-211ENST00000472765 RRBP1Q9P2E9 1410 aaKnown RBP19.3■□□□□ 0.68
CCT3-211ENST00000472765 SUPT16HQ9Y5B9 1047 aaKnown RBP19.2■□□□□ 0.66
CCT3-211ENST00000472765 PABPN1Q86U42 306 aaKnown RBP eCLIP19.12■□□□□ 0.65
CCT3-211ENST00000472765 MAP3K1Q13233 1512 aa19.11■□□□□ 0.65
CCT3-211ENST00000472765 CCNB3Q8WWL7 1395 aa19.1■□□□□ 0.65
CCT3-211ENST00000472765 HMGXB3Q12766 1538 aa19.07■□□□□ 0.64
CCT3-211ENST00000472765 KIF27Q86VH2 1401 aa19.07■□□□□ 0.64
CCT3-211ENST00000472765 KANK4Q5T7N3 995 aaPredicted RBP19.07■□□□□ 0.64
CCT3-211ENST00000472765 CUX1P39880 1505 aa19.06■□□□□ 0.64
CCT3-211ENST00000472765 ARHGAP35Q9NRY4 1499 aa19.04■□□□□ 0.64
CCT3-211ENST00000472765 MAPKBP1O60336 1514 aa19.03■□□□□ 0.64
CCT3-211ENST00000472765 TSHZ2Q9NRE2 1034 aa19.01■□□□□ 0.63
CCT3-211ENST00000472765 PRDM2Q13029 1718 aa19.01■□□□□ 0.63
CCT3-211ENST00000472765 TIAM1Q13009 1591 aa19■□□□□ 0.63
CCT3-211ENST00000472765 RANGAP1P46060 587 aaPredicted RBP18.99■□□□□ 0.63
CCT3-211ENST00000472765 RAB3GAP2Q9H2M9 1393 aa18.95■□□□□ 0.62
CCT3-211ENST00000472765 NCAPD3P42695 1498 aa18.94■□□□□ 0.62
CCT3-211ENST00000472765 CFAP43Q8NDM7 1665 aa18.93■□□□□ 0.62
CCT3-211ENST00000472765 ANP32EQ9BTT0 268 aa18.92■□□□□ 0.62
CCT3-211ENST00000472765 SETD5Q9C0A6 1442 aa18.92■□□□□ 0.62
CCT3-211ENST00000472765 CFTRP13569 1480 aa18.9■□□□□ 0.62
CCT3-211ENST00000472765 TIMELESSQ9UNS1 1208 aa18.88■□□□□ 0.61
CCT3-211ENST00000472765 LRRC9Q6ZRR7 1453 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms