RNA–Protein interactions for RNA: ENST00000471496.5

LINC00888-202, long intergenic non-protein coding RNA 888, humanhuman

TSL 3 BASIC

Gene LINC00888, Length 1,490 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-202ENST00000471496 SYNJ2O15056 1496 aa21.3■■□□□ 1
LINC00888-202ENST00000471496 ERICH3Q5RHP9 1530 aa21.29■■□□□ 1
LINC00888-202ENST00000471496 ADAMTS12P58397 1594 aa21.28■■□□□ 1
LINC00888-202ENST00000471496 FBLN2P98095 1184 aa21.27■■□□□ 1
LINC00888-202ENST00000471496 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.26■□□□□ 0.99
LINC00888-202ENST00000471496 CHMP7Q8WUX9 453 aaPredicted RBP21.23■□□□□ 0.99
LINC00888-202ENST00000471496 C1QBPQ07021 282 aaKnown RBP21.22■□□□□ 0.99
LINC00888-202ENST00000471496 KIF27Q86VH2 1401 aa21.21■□□□□ 0.99
LINC00888-202ENST00000471496 FHAD1B1AJZ9 1412 aa21.2■□□□□ 0.98
LINC00888-202ENST00000471496 CLASP1Q7Z460 1538 aa21.19■□□□□ 0.98
LINC00888-202ENST00000471496 GRIN2AQ12879 1464 aa21.18■□□□□ 0.98
LINC00888-202ENST00000471496 IGF1RP08069 1367 aa21.16■□□□□ 0.98
LINC00888-202ENST00000471496 RIMBP3CA6NJZ7 1639 aa21.13■□□□□ 0.97
LINC00888-202ENST00000471496 RIMBP3BA6NNM3 1639 aa21.13■□□□□ 0.97
LINC00888-202ENST00000471496 RIMBP3Q9UFD9 1639 aa21.13■□□□□ 0.97
LINC00888-202ENST00000471496 TRIM41Q8WV44 630 aa21.13■□□□□ 0.97
LINC00888-202ENST00000471496 CEP170Q5SW79 1584 aa21.11■□□□□ 0.97
LINC00888-202ENST00000471496 RUSC2Q8N2Y8 1516 aa21.11■□□□□ 0.97
LINC00888-202ENST00000471496 CUL7Q14999 1698 aa21.11■□□□□ 0.97
LINC00888-202ENST00000471496 NUP160Q12769 1436 aa21.11■□□□□ 0.97
LINC00888-202ENST00000471496 ARHGEF11O15085 1522 aa21.1■□□□□ 0.97
LINC00888-202ENST00000471496 CARMIL1Q5VZK9 1371 aa21■□□□□ 0.95
LINC00888-202ENST00000471496 SHROOM2Q13796 1616 aa20.98■□□□□ 0.95
LINC00888-202ENST00000471496 ARAP1Q96P48 1450 aa20.95■□□□□ 0.94
LINC00888-202ENST00000471496 ERCC6L2Q5T890 1561 aa20.92■□□□□ 0.94
LINC00888-202ENST00000471496 RAPGEF2Q9Y4G8 1499 aa20.89■□□□□ 0.93
LINC00888-202ENST00000471496 KIAA0586Q9BVV6 1533 aa20.88■□□□□ 0.93
LINC00888-202ENST00000471496 PRXQ9BXM0 1461 aa20.86■□□□□ 0.93
LINC00888-202ENST00000471496 CYB5RLQ6IPT4 315 aa20.85■□□□□ 0.93
LINC00888-202ENST00000471496 JPH4Q96JJ6 628 aa20.84■□□□□ 0.93
LINC00888-202ENST00000471496 EEA1Q15075 1411 aa20.81■□□□□ 0.92
LINC00888-202ENST00000471496 PRG4Q92954 1404 aaPredicted RBP20.8■□□□□ 0.92
LINC00888-202ENST00000471496 CSRNP3Q8WYN3 585 aa20.79■□□□□ 0.92
LINC00888-202ENST00000471496 U3KPZ7 1027 aaPredicted RBP20.79■□□□□ 0.92
LINC00888-202ENST00000471496 IQGAP2Q13576 1575 aa20.78■□□□□ 0.92
LINC00888-202ENST00000471496 SLC4A2P04920 1241 aa20.77■□□□□ 0.92
LINC00888-202ENST00000471496 CTTNBP2Q8WZ74 1663 aa20.76■□□□□ 0.91
LINC00888-202ENST00000471496 FAM9AQ8IZU1 332 aaPredicted RBP20.7■□□□□ 0.9
LINC00888-202ENST00000471496 UGGT2Q9NYU1 1516 aa20.68■□□□□ 0.9
LINC00888-202ENST00000471496 DISP1Q96F81 1524 aa20.66■□□□□ 0.9
LINC00888-202ENST00000471496 KIF21BO75037 1637 aa20.66■□□□□ 0.9
LINC00888-202ENST00000471496 SLC4A1APQ9BWU0 796 aaKnown RBP20.65■□□□□ 0.9
LINC00888-202ENST00000471496 CARMIL2Q6F5E8 1435 aa20.6■□□□□ 0.89
LINC00888-202ENST00000471496 KIAA0556O60303 1618 aa20.6■□□□□ 0.89
LINC00888-202ENST00000471496 TNIKQ9UKE5 1360 aa20.56■□□□□ 0.88
LINC00888-202ENST00000471496 ADCY10Q96PN6 1610 aa20.56■□□□□ 0.88
LINC00888-202ENST00000471496 PTPRGP23470 1445 aa20.54■□□□□ 0.88
LINC00888-202ENST00000471496 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.53■□□□□ 0.88
LINC00888-202ENST00000471496 HNRNPUL2Q1KMD3 747 aaKnown RBP20.53■□□□□ 0.88
LINC00888-202ENST00000471496 GOLGA3Q08378 1498 aa20.5■□□□□ 0.87
LINC00888-202ENST00000471496 APLP2Q06481 763 aa20.5■□□□□ 0.87
LINC00888-202ENST00000471496 SAMD9Q5K651 1589 aa20.49■□□□□ 0.87
LINC00888-202ENST00000471496 TTBK1Q5TCY1 1321 aaPredicted RBP20.45■□□□□ 0.86
LINC00888-202ENST00000471496 UHRF1BP1LA0JNW5 1464 aa20.44■□□□□ 0.86
LINC00888-202ENST00000471496 UACAQ9BZF9 1416 aa20.43■□□□□ 0.86
LINC00888-202ENST00000471496 EHMT2Q96KQ7 1210 aa20.42■□□□□ 0.86
LINC00888-202ENST00000471496 ABCC2Q92887 1545 aa20.41■□□□□ 0.86
LINC00888-202ENST00000471496 MAPKBP1O60336 1514 aa20.39■□□□□ 0.86
LINC00888-202ENST00000471496 ABCA8O94911 1581 aa20.38■□□□□ 0.85
LINC00888-202ENST00000471496 PLB1Q6P1J6 1458 aa20.38■□□□□ 0.85
LINC00888-202ENST00000471496 CAPN15O75808 1086 aa20.37■□□□□ 0.85
LINC00888-202ENST00000471496 UBTFP17480 764 aaKnown RBP20.37■□□□□ 0.85
LINC00888-202ENST00000471496 SAMD1Q6SPF0 538 aaPredicted RBP20.37■□□□□ 0.85
LINC00888-202ENST00000471496 P3H3Q8IVL6 736 aa20.37■□□□□ 0.85
LINC00888-202ENST00000471496 TRHP20396 242 aaPredicted RBP20.37■□□□□ 0.85
LINC00888-202ENST00000471496 KIF13AQ9H1H9 1805 aa20.36■□□□□ 0.85
LINC00888-202ENST00000471496 EFCAB5A4FU69 1503 aa20.35■□□□□ 0.85
LINC00888-202ENST00000471496 KDM5BQ9UGL1 1544 aa20.34■□□□□ 0.85
LINC00888-202ENST00000471496 SPINK5Q9NQ38 1064 aaPredicted RBP20.34■□□□□ 0.85
LINC00888-202ENST00000471496 NPM1P06748 294 aaKnown RBP eCLIP20.33■□□□□ 0.85
LINC00888-202ENST00000471496 RANGAP1P46060 587 aaPredicted RBP20.33■□□□□ 0.85
LINC00888-202ENST00000471496 MYCNP04198 464 aaPredicted RBP20.32■□□□□ 0.84
LINC00888-202ENST00000471496 ZCCHC11Q5TAX3 1644 aaKnown RBP20.32■□□□□ 0.84
LINC00888-202ENST00000471496 FHOD3Q2V2M9 1422 aa20.32■□□□□ 0.84
LINC00888-202ENST00000471496 DIP2BQ9P265 1576 aa20.29■□□□□ 0.84
LINC00888-202ENST00000471496 ABCC10Q5T3U5 1492 aa20.28■□□□□ 0.84
LINC00888-202ENST00000471496 ARHGAP35Q9NRY4 1499 aa20.28■□□□□ 0.84
LINC00888-202ENST00000471496 FOXD4L1Q9NU39 408 aa20.27■□□□□ 0.84
LINC00888-202ENST00000471496 RAPGEF6Q8TEU7 1601 aa20.27■□□□□ 0.83
LINC00888-202ENST00000471496 ASXL2Q76L83 1435 aa20.26■□□□□ 0.83
LINC00888-202ENST00000471496 ZNF219Q9P2Y4 722 aaPredicted RBP20.21■□□□□ 0.83
LINC00888-202ENST00000471496 ATP10BO94823 1461 aa20.2■□□□□ 0.82
LINC00888-202ENST00000471496 NUP153P49790 1475 aaKnown RBP20.19■□□□□ 0.82
LINC00888-202ENST00000471496 FAM69CQ0P6D2 419 aa20.18■□□□□ 0.82
LINC00888-202ENST00000471496 DSG3P32926 999 aa20.17■□□□□ 0.82
LINC00888-202ENST00000471496 GLI2P10070 1586 aa20.16■□□□□ 0.82
LINC00888-202ENST00000471496 WDR7Q9Y4E6 1490 aa20.15■□□□□ 0.82
LINC00888-202ENST00000471496 EPRSP07814 1512 aaKnown RBP20.15■□□□□ 0.82
LINC00888-202ENST00000471496 FMN1Q68DA7 1419 aa20.12■□□□□ 0.81
LINC00888-202ENST00000471496 ARID3CA6NKF2 412 aa20.12■□□□□ 0.81
LINC00888-202ENST00000471496 CLIP1P30622 1438 aa20.12■□□□□ 0.81
LINC00888-202ENST00000471496 TSPOAP1O95153 1857 aa20.11■□□□□ 0.81
LINC00888-202ENST00000471496 MAP3K4Q9Y6R4 1608 aa20.1■□□□□ 0.81
LINC00888-202ENST00000471496 PPRC1Q5VV67 1664 aaKnown RBP20.1■□□□□ 0.81
LINC00888-202ENST00000471496 LOC105371045A0A1W2PR82 267 aa20.1■□□□□ 0.81
LINC00888-202ENST00000471496 LRRIQ1Q96JM4 1722 aa20.08■□□□□ 0.81
LINC00888-202ENST00000471496 HECW1Q76N89 1606 aa20.06■□□□□ 0.8
LINC00888-202ENST00000471496 CDK13Q14004 1512 aaKnown RBP20.05■□□□□ 0.8
LINC00888-202ENST00000471496 CEP162Q5TB80 1403 aa20.05■□□□□ 0.8
LINC00888-202ENST00000471496 PCF11O94913 1555 aaKnown RBP20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms