RNA–Protein interactions for RNA: ENST00000470834.5

TNIK-210, Transcript of TRAF2 and NCK interacting kinase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNIK, Length 3,972 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIK-210ENST00000470834 HMGXB3Q12766 1538 aa11.82□□□□□ -0.52
TNIK-210ENST00000470834 SIN3AQ96ST3 1273 aa11.81□□□□□ -0.52
TNIK-210ENST00000470834 RRP7BPQ9NSQ0 103 aa11.8□□□□□ -0.52
TNIK-210ENST00000470834 SENP3Q9H4L4 574 aaPredicted RBP11.76□□□□□ -0.53
TNIK-210ENST00000470834 RTL5Q5HYW3 569 aaPredicted RBP11.76□□□□□ -0.53
TNIK-210ENST00000470834 SLC4A1APQ9BWU0 796 aaKnown RBP11.75□□□□□ -0.53
TNIK-210ENST00000470834 NESP48681 1621 aa11.75□□□□□ -0.53
TNIK-210ENST00000470834 CUX2O14529 1486 aa11.74□□□□□ -0.53
TNIK-210ENST00000470834 KIF27Q86VH2 1401 aa11.73□□□□□ -0.53
TNIK-210ENST00000470834 CEP164Q9UPV0 1460 aa11.73□□□□□ -0.53
TNIK-210ENST00000470834 MTUS2Q5JR59 1369 aa11.73□□□□□ -0.53
TNIK-210ENST00000470834 CUX1P39880 1505 aa11.73□□□□□ -0.53
TNIK-210ENST00000470834 CFTRP13569 1480 aa11.72□□□□□ -0.53
TNIK-210ENST00000470834 CHMP7Q8WUX9 453 aaPredicted RBP11.71□□□□□ -0.53
TNIK-210ENST00000470834 TDRD9Q8NDG6 1382 aaKnown RBP11.71□□□□□ -0.53
TNIK-210ENST00000470834 ANP32EQ9BTT0 268 aa11.71□□□□□ -0.53
TNIK-210ENST00000470834 DAXXQ9UER7 740 aaPredicted RBP11.71□□□□□ -0.53
TNIK-210ENST00000470834 EEA1Q15075 1411 aa11.7□□□□□ -0.54
TNIK-210ENST00000470834 BCL11AQ9H165 835 aa11.7□□□□□ -0.54
TNIK-210ENST00000470834 RAPGEF2Q9Y4G8 1499 aa11.69□□□□□ -0.54
TNIK-210ENST00000470834 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.69□□□□□ -0.54
TNIK-210ENST00000470834 TOP2BQ02880 1626 aa11.68□□□□□ -0.54
TNIK-210ENST00000470834 TSHZ2Q9NRE2 1034 aa11.68□□□□□ -0.54
TNIK-210ENST00000470834 CARMIL1Q5VZK9 1371 aa11.67□□□□□ -0.54
TNIK-210ENST00000470834 CLSPNQ9HAW4 1339 aa11.66□□□□□ -0.54
TNIK-210ENST00000470834 KDM2AQ9Y2K7 1162 aa11.66□□□□□ -0.54
TNIK-210ENST00000470834 TONSLQ96HA7 1378 aa11.66□□□□□ -0.54
TNIK-210ENST00000470834 CADPSQ9ULU8 1353 aa11.65□□□□□ -0.54
TNIK-210ENST00000470834 BIVM-ERCC5R4GMW8 1640 aa11.62□□□□□ -0.55
TNIK-210ENST00000470834 MRS2Q9HD23 443 aa11.62□□□□□ -0.55
TNIK-210ENST00000470834 FOXD1Q16676 465 aa11.62□□□□□ -0.55
TNIK-210ENST00000470834 RTN4Q9NQC3 1192 aaKnown RBP11.62□□□□□ -0.55
TNIK-210ENST00000470834 B4GALNT3Q6L9W6 998 aa11.61□□□□□ -0.55
TNIK-210ENST00000470834 RBM19Q9Y4C8 960 aaKnown RBP11.6□□□□□ -0.55
TNIK-210ENST00000470834 VPS8Q8N3P4 1428 aa11.59□□□□□ -0.55
TNIK-210ENST00000470834 PLPPR3Q6T4P5 718 aa11.59□□□□□ -0.55
TNIK-210ENST00000470834 ARXQ96QS3 562 aa11.59□□□□□ -0.55
TNIK-210ENST00000470834 EIF5BO60841 1220 aaKnown RBP11.58□□□□□ -0.56
TNIK-210ENST00000470834 FANCD2Q9BXW9 1451 aa11.57□□□□□ -0.56
TNIK-210ENST00000470834 CCDC136Q96JN2 1154 aa11.56□□□□□ -0.56
TNIK-210ENST00000470834 CHGAP10645 457 aaKnown RBP11.56□□□□□ -0.56
TNIK-210ENST00000470834 CCNB3Q8WWL7 1395 aa11.56□□□□□ -0.56
TNIK-210ENST00000470834 RGL3Q3MIN7 710 aa11.55□□□□□ -0.56
TNIK-210ENST00000470834 RAD54L2Q9Y4B4 1467 aa11.55□□□□□ -0.56
TNIK-210ENST00000470834 ANP32AP39687 249 aaKnown RBP11.55□□□□□ -0.56
TNIK-210ENST00000470834 FGD5Q6ZNL6 1462 aa11.55□□□□□ -0.56
TNIK-210ENST00000470834 FHOD3Q2V2M9 1422 aa11.55□□□□□ -0.56
TNIK-210ENST00000470834 PRDM2Q13029 1718 aa11.54□□□□□ -0.56
TNIK-210ENST00000470834 KIF21BO75037 1637 aa11.52□□□□□ -0.57
TNIK-210ENST00000470834 CFDP1Q9UEE9 299 aaPredicted RBP11.5□□□□□ -0.57
TNIK-210ENST00000470834 ERCC6Q03468 1493 aa11.5□□□□□ -0.57
TNIK-210ENST00000470834 PRXQ9BXM0 1461 aa11.49□□□□□ -0.57
TNIK-210ENST00000470834 TSPY4P0CV99 314 aa11.48□□□□□ -0.57
TNIK-210ENST00000470834 TSPY10P0CW01 314 aa11.48□□□□□ -0.57
TNIK-210ENST00000470834 LAS1LQ9Y4W2 734 aaKnown RBP11.48□□□□□ -0.57
TNIK-210ENST00000470834 URB2Q14146 1524 aaKnown RBP11.48□□□□□ -0.57
TNIK-210ENST00000470834 TMC1Q8TDI8 760 aa11.47□□□□□ -0.57
TNIK-210ENST00000470834 POLA1P09884 1462 aaPredicted RBP11.46□□□□□ -0.57
TNIK-210ENST00000470834 TOPBP1Q92547 1522 aa11.46□□□□□ -0.57
TNIK-210ENST00000470834 KIF21AQ7Z4S6 1674 aa11.46□□□□□ -0.57
TNIK-210ENST00000470834 IGF1RP08069 1367 aa11.46□□□□□ -0.57
TNIK-210ENST00000470834 ZBTB47Q9UFB7 747 aaPredicted RBP11.46□□□□□ -0.57
TNIK-210ENST00000470834 RAB3GAP2Q9H2M9 1393 aa11.46□□□□□ -0.57
TNIK-210ENST00000470834 PLEKHD1A6NEE1 506 aa11.46□□□□□ -0.58
TNIK-210ENST00000470834 EIF4G2P78344 907 aaKnown RBP eCLIP11.43□□□□□ -0.582e-7■■■■■ 41.6
TNIK-210ENST00000470834 ARAP1Q96P48 1450 aa11.41□□□□□ -0.58
TNIK-210ENST00000470834 DNMBPQ6XZF7 1577 aa11.4□□□□□ -0.58
TNIK-210ENST00000470834 DHX57Q6P158 1386 aaKnown RBP11.39□□□□□ -0.59
TNIK-210ENST00000470834 LAMC3Q9Y6N6 1575 aa11.39□□□□□ -0.59
TNIK-210ENST00000470834 DEKP35659 375 aaKnown RBP11.39□□□□□ -0.59
TNIK-210ENST00000470834 FHAD1B1AJZ9 1412 aa11.37□□□□□ -0.59
TNIK-210ENST00000470834 CANXP27824 592 aaKnown RBP11.37□□□□□ -0.59
TNIK-210ENST00000470834 ERICH3Q5RHP9 1530 aa11.36□□□□□ -0.59
TNIK-210ENST00000470834 SETD5Q9C0A6 1442 aa11.36□□□□□ -0.59
TNIK-210ENST00000470834 ARHGAP35Q9NRY4 1499 aa11.35□□□□□ -0.59
TNIK-210ENST00000470834 PDS5BQ9NTI5 1447 aa11.35□□□□□ -0.59
TNIK-210ENST00000470834 NPM1P06748 294 aaKnown RBP eCLIP11.35□□□□□ -0.59
TNIK-210ENST00000470834 HSPA5P11021 654 aaKnown RBP11.35□□□□□ -0.59
TNIK-210ENST00000470834 ZNF644Q9H582 1327 aaPredicted RBP11.34□□□□□ -0.59
TNIK-210ENST00000470834 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.34□□□□□ -0.59
TNIK-210ENST00000470834 AQRO60306 1485 aaKnown RBP eCLIP11.33□□□□□ -0.61e-6■■■■■ 33.8
TNIK-210ENST00000470834 ABCA10Q8WWZ4 1543 aa11.33□□□□□ -0.6
TNIK-210ENST00000470834 PPP4R2Q9NY27 417 aa11.33□□□□□ -0.6
TNIK-210ENST00000470834 PLEKHG5O94827 1062 aa11.32□□□□□ -0.6
TNIK-210ENST00000470834 NOP58Q9Y2X3 529 aaKnown RBP11.32□□□□□ -0.6
TNIK-210ENST00000470834 PHLDB1Q86UU1 1377 aa11.31□□□□□ -0.6
TNIK-210ENST00000470834 HNRNPMP52272 730 aaKnown RBP eCLIP11.31□□□□□ -0.61e-8■■■■□ 20.4
TNIK-210ENST00000470834 CARD11Q9BXL7 1154 aa11.31□□□□□ -0.6
TNIK-210ENST00000470834 DCAF11Q8TEB1 546 aa11.31□□□□□ -0.6
TNIK-210ENST00000470834 PPP1R15AO75807 674 aaPredicted RBP11.3□□□□□ -0.6
TNIK-210ENST00000470834 PKD2Q13563 968 aa11.3□□□□□ -0.6
TNIK-210ENST00000470834 NEFMP07197 916 aa11.3□□□□□ -0.6
TNIK-210ENST00000470834 WDR97A6NE52 1622 aa11.29□□□□□ -0.6
TNIK-210ENST00000470834 RGS3P49796 1198 aa11.29□□□□□ -0.6
TNIK-210ENST00000470834 MPHOSPH9Q99550 1183 aa11.29□□□□□ -0.6
TNIK-210ENST00000470834 ZNF608Q9ULD9 1512 aaPredicted RBP11.29□□□□□ -0.6
TNIK-210ENST00000470834 JPH4Q96JJ6 628 aa11.29□□□□□ -0.6
TNIK-210ENST00000470834 L3MBTL2Q969R5 705 aa11.28□□□□□ -0.6
TNIK-210ENST00000470834 STAG3Q9UJ98 1225 aa11.28□□□□□ -0.6
TNIK-210ENST00000470834 SLC24A1O60721 1099 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms